BacMap

Definition	Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession	NC_007776
Length	3,046,682

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The map label for this gene is ftsH [H]

Identifier: 86609151

GI number: 86609151

Start: 1767537

End: 1769048

Strand: Direct

Name: ftsH [H]

Synonym: CYB_1691

Alternate gene names: 86609151

Gene position: 1767537-1769048 (Clockwise)

Preceding gene: 86609150

Following gene: 86609152

Centisome position: 58.02

GC content: 59.06

Gene sequence:

>1512_bases
ATGCAAGAGCTAAGCATCCTCATTCAAGCTCAATACCCACTGCTGTACCTGCTGACTCCAGAGGAGGAACGGGCAGAAGC
GGCTCTGGCAGCAATTGCCCGCACCCTTAAGCCTCAGCGTCGCCTATTCATTTGGACAGTTACCCACGGCATCGTCGAAT
ACGGCAACCCCCGCAGCCTCACCCAGCACAACACCCAATCCCCCCAGCCCGCCATCCAGTGGGTAATGGAGCAAAAGGAT
CCCGCCATCTGCGTCTTCAAAGACCTACATGACTTCTTGGACAACACCGAGGTGAAGCGCTGGCTGCGGGATGCTATTGC
CAGCCTGAAGGGATCCCACAAAACCATCCTGCTCATGTCGCCGGTGCAGGTGATCCCGGTCGAGCTGGAGAAAGACATTT
GCGTAGTGGACTTCCCCCTGCCGGACATGGCCACATTGGAGCGCGCCCTCAACCGCCAGCTGGAGCAGATCCCGCGCTCC
CTGCCTTTGGCTCCTGATACCCGCGAAAAGTTGCTCAAGGCGGCCCTGGGCCTAACGCAGGACGAGGCAGAAAAAGTCTA
CCGCAAGGCTGTGGTGATGCATGGTCGCCTCACCGAGGCAGAAGTAGACATCATCCTCTCTGAGAAGAAGCAACTGATCC
GGCGCAACGGCATTCTCGAGTTTATCGAAGAGGACGAGACCATCGACGCCGTTGGCGGTCTGGAAGAGCTGAAGCGCTGG
CTGCTGCAACGTTCTGAGGCCTTCACTGAGCGGGCCCGCGCCTATGGACTGCCCCAACCCAAGGGTATGCTGATCCTGGG
CGTGCCTGGCTGCGGTAAGTCGCTGATCGCCAAGACCACTGCCCGTCTCTGGGGCCTGCCCCTGCTGCGTCTGGACATGG
GCCGCGTTTATGATGGCTCCATGGTGGGCAAATCGGAAGCGAATCTGCGCAGTGCCCTGCGAACTGCTGAATCTCTCGCC
CCTGCCATCCTTTTCATCGACGAGCTGGACAAAGCCTTTGCTGGATCAGCAGGCTCCAGCGATTCTGACGGGGGCACCTC
TAGCCGCATCTTTGGCTCCTTCCTGACCTGGATGCAGGAGAAACGCTCGCCGGTTTTTGTCATGGCCACGGCCAACCGTG
TGGATCGTCTGCCGGGTGAATTCTTGCGCAAGGGCCGTTTTGACGAAATCTTCTTCGTGGACTTGCCCAACATCAACGAG
CGCATCGAGATCTTTCGGATCCACCTGAAGAAGCGGCGGCGCGACATCAGCCGCTTTGATCTGCGCCAGTTGGCCGCAGC
CTGTGAAGGCTTCTCCGGCGCGGAGATCGAACAAGTTTTGATTGCTGCCATGTACGAAGCGTTTGCCCAGAACCGTGAGT
TTACCCAGCTGGACATTCTGGCAGCAACGAAAGCAACTCAACCGCTATCTCGCACCATGACGGAGCAAGTGGTAGCGTTG
AGGGAATGGGCCCAGCAGCGGGCTCGGCCTGCAGCGGCCTCTGTAGCCGAGTACCAGCGGCTGGAGTTCTAG

Upstream 100 bases:

>100_bases
GCGTACTCCCAAGTGCAATCCAATACCTAGGCAACTCGAACCCCATTTTTCAACCGTTCTGGCGGCTCCTGAAATTTCCC
CTCTGCAGTTGGTGTTTCCC

Downstream 100 bases:

>100_bases
GAGGAGGTGAGGATCCAAAGCTACCTTGACAGAAGCAGGGACGGCAGGGCCCAAACCTTCCCCAAAGAACAGTGCCCATT
GTTTGTGTCGATGTTCCAAC

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MQELSILIQAQYPLLYLLTPEEERAEAALAAIARTLKPQRRLFIWTVTHGIVEYGNPRSLTQHNTQSPQPAIQWVMEQKD
PAICVFKDLHDFLDNTEVKRWLRDAIASLKGSHKTILLMSPVQVIPVELEKDICVVDFPLPDMATLERALNRQLEQIPRS
LPLAPDTREKLLKAALGLTQDEAEKVYRKAVVMHGRLTEAEVDIILSEKKQLIRRNGILEFIEEDETIDAVGGLEELKRW
LLQRSEAFTERARAYGLPQPKGMLILGVPGCGKSLIAKTTARLWGLPLLRLDMGRVYDGSMVGKSEANLRSALRTAESLA
PAILFIDELDKAFAGSAGSSDSDGGTSSRIFGSFLTWMQEKRSPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNINE
RIEIFRIHLKKRRRDISRFDLRQLAAACEGFSGAEIEQVLIAAMYEAFAQNREFTQLDILAATKATQPLSRTMTEQVVAL
REWAQQRARPAAASVAEYQRLEF

Sequences:

>Translated_503_residues
MQELSILIQAQYPLLYLLTPEEERAEAALAAIARTLKPQRRLFIWTVTHGIVEYGNPRSLTQHNTQSPQPAIQWVMEQKD
PAICVFKDLHDFLDNTEVKRWLRDAIASLKGSHKTILLMSPVQVIPVELEKDICVVDFPLPDMATLERALNRQLEQIPRS
LPLAPDTREKLLKAALGLTQDEAEKVYRKAVVMHGRLTEAEVDIILSEKKQLIRRNGILEFIEEDETIDAVGGLEELKRW
LLQRSEAFTERARAYGLPQPKGMLILGVPGCGKSLIAKTTARLWGLPLLRLDMGRVYDGSMVGKSEANLRSALRTAESLA
PAILFIDELDKAFAGSAGSSDSDGGTSSRIFGSFLTWMQEKRSPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNINE
RIEIFRIHLKKRRRDISRFDLRQLAAACEGFSGAEIEQVLIAAMYEAFAQNREFTQLDILAATKATQPLSRTMTEQVVAL
REWAQQRARPAAASVAEYQRLEF
>Mature_503_residues
MQELSILIQAQYPLLYLLTPEEERAEAALAAIARTLKPQRRLFIWTVTHGIVEYGNPRSLTQHNTQSPQPAIQWVMEQKD
PAICVFKDLHDFLDNTEVKRWLRDAIASLKGSHKTILLMSPVQVIPVELEKDICVVDFPLPDMATLERALNRQLEQIPRS
LPLAPDTREKLLKAALGLTQDEAEKVYRKAVVMHGRLTEAEVDIILSEKKQLIRRNGILEFIEEDETIDAVGGLEELKRW
LLQRSEAFTERARAYGLPQPKGMLILGVPGCGKSLIAKTTARLWGLPLLRLDMGRVYDGSMVGKSEANLRSALRTAESLA
PAILFIDELDKAFAGSAGSSDSDGGTSSRIFGSFLTWMQEKRSPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNINE
RIEIFRIHLKKRRRDISRFDLRQLAAACEGFSGAEIEQVLIAAMYEAFAQNREFTQLDILAATKATQPLSRTMTEQVVAL
REWAQQRARPAAASVAEYQRLEF

Specific function: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins [H]

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the peptidase M41 family [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=243, Percent_Identity=35.3909465020576, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI6005942, Length=243, Percent_Identity=32.0987654320988, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4507173, Length=247, Percent_Identity=33.6032388663968, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI45643125, Length=229, Percent_Identity=32.3144104803493, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI45643123, Length=229, Percent_Identity=32.3144104803493, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI24497435, Length=256, Percent_Identity=30.859375, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI300192933, Length=246, Percent_Identity=32.9268292682927, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI21327685, Length=246, Percent_Identity=30.0813008130081, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI7657689, Length=246, Percent_Identity=30.0813008130081, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI310125280, Length=267, Percent_Identity=27.7153558052434, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI4506209, Length=250, Percent_Identity=30.8, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI229577436, Length=247, Percent_Identity=29.1497975708502, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI24497618, Length=230, Percent_Identity=30, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI310125282, Length=268, Percent_Identity=27.6119402985075, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI195539395, Length=245, Percent_Identity=29.3877551020408, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI156564401, Length=268, Percent_Identity=27.6119402985075, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4505725, Length=225, Percent_Identity=28.4444444444444, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI153792536, Length=278, Percent_Identity=28.4172661870504, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI24430151, Length=235, Percent_Identity=29.3617021276596, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI31377644, Length=262, Percent_Identity=29.0076335877863, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI21361144, Length=219, Percent_Identity=29.6803652968037, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI89064750, Length=231, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI5729991, Length=231, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI24430155, Length=231, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI194018488, Length=166, Percent_Identity=36.7469879518072, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI7019569, Length=211, Percent_Identity=26.0663507109005, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI17865802, Length=189, Percent_Identity=27.5132275132275, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI31742536, Length=214, Percent_Identity=28.0373831775701, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI112789543, Length=214, Percent_Identity=28.0373831775701, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1789568, Length=242, Percent_Identity=30.5785123966942, Blast_Score=90, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17531535, Length=280, Percent_Identity=32.1428571428571, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17508053, Length=252, Percent_Identity=34.1269841269841, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17532375, Length=214, Percent_Identity=33.1775700934579, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17537217, Length=227, Percent_Identity=32.15859030837, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71994521, Length=283, Percent_Identity=32.5088339222615, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI25153574, Length=299, Percent_Identity=28.4280936454849, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17554264, Length=194, Percent_Identity=33.5051546391753, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17562804, Length=228, Percent_Identity=32.4561403508772, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI193209502, Length=224, Percent_Identity=29.0178571428571, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17554786, Length=257, Percent_Identity=30.7392996108949, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17541224, Length=217, Percent_Identity=29.9539170506912, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17541226, Length=217, Percent_Identity=29.9539170506912, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI115534323, Length=193, Percent_Identity=33.6787564766839, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144278, Length=260, Percent_Identity=30.3846153846154, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25144281, Length=260, Percent_Identity=30.3846153846154, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71987372, Length=235, Percent_Identity=31.063829787234, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71987364, Length=235, Percent_Identity=31.063829787234, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17563248, Length=248, Percent_Identity=30.6451612903226, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17563250, Length=235, Percent_Identity=29.3617021276596, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17508701, Length=191, Percent_Identity=29.8429319371728, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI86561515, Length=211, Percent_Identity=27.0142180094787, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17554784, Length=276, Percent_Identity=27.1739130434783, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI133901658, Length=243, Percent_Identity=27.1604938271605, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI133901662, Length=243, Percent_Identity=27.1604938271605, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193206116, Length=251, Percent_Identity=29.4820717131474, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI133931034, Length=251, Percent_Identity=29.4820717131474, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193206114, Length=251, Percent_Identity=29.4820717131474, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17505546, Length=242, Percent_Identity=28.099173553719, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25146157, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323429, Length=264, Percent_Identity=32.5757575757576, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6320077, Length=216, Percent_Identity=34.7222222222222, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6322994, Length=240, Percent_Identity=30, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6322651, Length=196, Percent_Identity=30.1020408163265, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6323736, Length=226, Percent_Identity=34.9557522123894, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6324833, Length=248, Percent_Identity=31.4516129032258, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321390, Length=251, Percent_Identity=30.6772908366534, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320854, Length=234, Percent_Identity=32.0512820512821, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6321465, Length=195, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319554, Length=242, Percent_Identity=30.9917355371901, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324000, Length=301, Percent_Identity=27.5747508305648, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6325281, Length=194, Percent_Identity=31.9587628865979, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324691, Length=230, Percent_Identity=31.7391304347826, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322704, Length=248, Percent_Identity=30.6451612903226, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6320602, Length=288, Percent_Identity=30.2083333333333, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320197, Length=235, Percent_Identity=26.8085106382979, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6321709, Length=229, Percent_Identity=27.5109170305677, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6325431, Length=188, Percent_Identity=29.2553191489362, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325183, Length=209, Percent_Identity=27.7511961722488, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24660075, Length=266, Percent_Identity=31.5789473684211, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI45552965, Length=266, Percent_Identity=31.5789473684211, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281365776, Length=266, Percent_Identity=31.5789473684211, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI161076486, Length=225, Percent_Identity=31.5555555555556, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI17137560, Length=225, Percent_Identity=31.5555555555556, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI161076488, Length=225, Percent_Identity=31.5555555555556, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24639391, Length=237, Percent_Identity=32.4894514767932, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19921202, Length=251, Percent_Identity=34.6613545816733, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24665814, Length=224, Percent_Identity=33.0357142857143, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28574878, Length=224, Percent_Identity=33.0357142857143, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24656825, Length=268, Percent_Identity=27.9850746268657, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24656820, Length=268, Percent_Identity=27.9850746268657, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24652279, Length=193, Percent_Identity=33.160621761658, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI19920408, Length=260, Percent_Identity=31.5384615384615, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24658770, Length=229, Percent_Identity=30.5676855895196, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24651451, Length=255, Percent_Identity=31.7647058823529, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281363136, Length=137, Percent_Identity=37.2262773722628, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI78707192, Length=137, Percent_Identity=37.2262773722628, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28573010, Length=310, Percent_Identity=28.0645161290323, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17137738, Length=250, Percent_Identity=31.6, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17864540, Length=243, Percent_Identity=29.6296296296296, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI18860063, Length=276, Percent_Identity=27.1739130434783, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24649446, Length=239, Percent_Identity=30.1255230125523, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24640100, Length=255, Percent_Identity=29.8039215686275, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI20129529, Length=191, Percent_Identity=33.5078534031414, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI17738151, Length=219, Percent_Identity=29.2237442922374, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355121, Length=227, Percent_Identity=29.9559471365639, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859657, Length=189, Percent_Identity=30.1587301587302, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281361487, Length=239, Percent_Identity=27.6150627615063, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI20129423, Length=184, Percent_Identity=31.5217391304348, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24663015, Length=220, Percent_Identity=30, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24644145, Length=195, Percent_Identity=30.2564102564103, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR005936
- InterPro:   IPR011546
- InterPro:   IPR000642 [H]

Pfam domain/function: PF00004 AAA; PF06480 FtsH_ext; PF01434 Peptidase_M41 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56809; Mature: 56809

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQELSILIQAQYPLLYLLTPEEERAEAALAAIARTLKPQRRLFIWTVTHGIVEYGNPRSL
CCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCC
TQHNTQSPQPAIQWVMEQKDPAICVFKDLHDFLDNTEVKRWLRDAIASLKGSHKTILLMS
CCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEC
PVQVIPVELEKDICVVDFPLPDMATLERALNRQLEQIPRSLPLAPDTREKLLKAALGLTQ
CCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
DEAEKVYRKAVVMHGRLTEAEVDIILSEKKQLIRRNGILEFIEEDETIDAVGGLEELKRW
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCHHHHHHH
LLQRSEAFTERARAYGLPQPKGMLILGVPGCGKSLIAKTTARLWGLPLLRLDMGRVYDGS
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCC
MVGKSEANLRSALRTAESLAPAILFIDELDKAFAGSAGSSDSDGGTSSRIFGSFLTWMQE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
KRSPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNINERIEIFRIHLKKRRRDISRFD
CCCCEEEEEECCHHHCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LRQLAAACEGFSGAEIEQVLIAAMYEAFAQNREFTQLDILAATKATQPLSRTMTEQVVAL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHH
REWAQQRARPAAASVAEYQRLEF
HHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQELSILIQAQYPLLYLLTPEEERAEAALAAIARTLKPQRRLFIWTVTHGIVEYGNPRSL
CCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCC
TQHNTQSPQPAIQWVMEQKDPAICVFKDLHDFLDNTEVKRWLRDAIASLKGSHKTILLMS
CCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEC
PVQVIPVELEKDICVVDFPLPDMATLERALNRQLEQIPRSLPLAPDTREKLLKAALGLTQ
CCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
DEAEKVYRKAVVMHGRLTEAEVDIILSEKKQLIRRNGILEFIEEDETIDAVGGLEELKRW
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCHHHHHHH
LLQRSEAFTERARAYGLPQPKGMLILGVPGCGKSLIAKTTARLWGLPLLRLDMGRVYDGS
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCC
MVGKSEANLRSALRTAESLAPAILFIDELDKAFAGSAGSSDSDGGTSSRIFGSFLTWMQE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
KRSPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNINERIEIFRIHLKKRRRDISRFD
CCCCEEEEEECCHHHCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LRQLAAACEGFSGAEIEQVLIAAMYEAFAQNREFTQLDILAATKATQPLSRTMTEQVVAL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHH
REWAQQRARPAAASVAEYQRLEF
HHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12466555 [H]