| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609150
Identifier: 86609150
GI number: 86609150
Start: 1766988
End: 1767338
Strand: Direct
Name: 86609150
Synonym: CYB_1690
Alternate gene names: NA
Gene position: 1766988-1767338 (Clockwise)
Preceding gene: 86609149
Following gene: 86609151
Centisome position: 58.0
GC content: 56.7
Gene sequence:
>351_bases GTGGAAGGCACAGAGTCCAAGCAGAAGGTGACCCTGTATCTCTCACCTGAGCTGCACCGGAATCTGAAGATTCGGGCTGC CGTGGAGCGGGAGCCGATGTCGGCAGTGGCAGAGAAGGCCATTACCTTCTATCTGCTTCACCCAGAGGTCATTGAAGGGG TACAAGGTAGCGCCTATCGTGTCCATCAATGTCCCAAGTGTAGTCACCCATTTGTTATCCGCGATGGAGAGGTGGTTTCC CTGCACCAGACATCGGCTGCCGAAGCCATCCTTGAAGAGGTGGAGCCAGAATACTGGGGATCGGCTGCTGGCTCGGAAGA GCAACGGCAGGATGCTCTGGTACCCTGCTAG
Upstream 100 bases:
>100_bases TAAAAACTTGCCGTCAAGCCGGCAGACTGGCTATGATAGGCCCCAAGTTTGGCAAGCAATTCAAAGAAAGCGGTTAGCCA TGAATCATCGGCCAGAGGTA
Downstream 100 bases:
>100_bases AACGCTCCCAAGCGGGCCCCCTTCAGGAACTTGAGCTGATAGGAGCAGACAGCAACACAGAAGGCTTCTAAAATCCTCTC AAAATCCATCCAACAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MEGTESKQKVTLYLSPELHRNLKIRAAVEREPMSAVAEKAITFYLLHPEVIEGVQGSAYRVHQCPKCSHPFVIRDGEVVS LHQTSAAEAILEEVEPEYWGSAAGSEEQRQDALVPC
Sequences:
>Translated_116_residues MEGTESKQKVTLYLSPELHRNLKIRAAVEREPMSAVAEKAITFYLLHPEVIEGVQGSAYRVHQCPKCSHPFVIRDGEVVS LHQTSAAEAILEEVEPEYWGSAAGSEEQRQDALVPC >Mature_116_residues MEGTESKQKVTLYLSPELHRNLKIRAAVEREPMSAVAEKAITFYLLHPEVIEGVQGSAYRVHQCPKCSHPFVIRDGEVVS LHQTSAAEAILEEVEPEYWGSAAGSEEQRQDALVPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12904; Mature: 12904
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGTESKQKVTLYLSPELHRNLKIRAAVEREPMSAVAEKAITFYLLHPEVIEGVQGSAYR CCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHEEEEEECHHHHCCCCCCCEE VHQCPKCSHPFVIRDGEVVSLHQTSAAEAILEEVEPEYWGSAAGSEEQRQDALVPC ECCCCCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MEGTESKQKVTLYLSPELHRNLKIRAAVEREPMSAVAEKAITFYLLHPEVIEGVQGSAYR CCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHEEEEEECHHHHCCCCCCCEE VHQCPKCSHPFVIRDGEVVSLHQTSAAEAILEEVEPEYWGSAAGSEEQRQDALVPC ECCCCCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA