Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609144

Identifier: 86609144

GI number: 86609144

Start: 1760072

End: 1760506

Strand: Direct

Name: 86609144

Synonym: CYB_1684

Alternate gene names: NA

Gene position: 1760072-1760506 (Clockwise)

Preceding gene: 86609142

Following gene: 86609145

Centisome position: 57.77

GC content: 62.07

Gene sequence:

>435_bases
ATGTTGCCCAAGCATCGTCCCAAGCAACTGTCGCTGGGCCCTCTGGAGTCGGAAATCTTGGACATCCTCTGGGATCTGGG
CAGTGCCAGCACCCGTCAAATCCACGAGCGCATCTTGGCCGATCCGGATCGGGAGCTGGCCTATGCCTCTGTGACTACAG
TTTTGCAGCGCTTAAGCCAGAAGGGCTGGGTGAGCTGTGAGCGCCGCACCGATCCCCAAGGGCGGAATCTGCCCATGCTG
TGGCGGCCTCGTCTTTCGCGTCAGGAAGCGGCCAGCCTCAGGGCCTTCACCCACCTGCAGCAGTTTTTGGCTGTAGGGGA
TCCCGATACGGTGGCAGCCTTTGCCGATAGCCTGGATCAGGCCAGTGTGTCCCAGTTGCAGGCGATTGCCGAACGGCTGC
GGGCAGCCCGTCAAGCCAGGAGGGATCCGCGATGA

Upstream 100 bases:

>100_bases
AGAACCACCATCTTCGAGCTTAGCGGATCCTTAAAATGGCTGAGGGGTTTGAGACTGCAACGGTTAGTCTAGATAAAAGT
TCCTACACCGGCAAAGGCTC

Downstream 100 bases:

>100_bases
GCCACTTGGGCATGTTATTGCTGGGCTTGGGCCTCAGTTGGCTGTGGCGAGCCCAGGTGCGCCTGGACAGGAGTGGGGGA
TGGGGCCGACGTTGGCAGCG

Product: BlaI/MecI/CopY family transcriptional regulator

Products: NA

Alternate protein names: BlaI/MecI/CopY Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; Transcriptional Repressor CopY Family; CopY Family Transcriptional Repressor; Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQKGWVSCERRTDPQGRNLPML
WRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQASVSQLQAIAERLRAARQARRDPR

Sequences:

>Translated_144_residues
MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQKGWVSCERRTDPQGRNLPML
WRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQASVSQLQAIAERLRAARQARRDPR
>Mature_144_residues
MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQKGWVSCERRTDPQGRNLPML
WRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQASVSQLQAIAERLRAARQARRDPR

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16304; Mature: 16304

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KGWVSCERRTDPQGRNLPMLWRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASVSQLQAIAERLRAARQARRDPR
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KGWVSCERRTDPQGRNLPMLWRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASVSQLQAIAERLRAARQARRDPR
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA