| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is acpP [H]
Identifier: 86609125
GI number: 86609125
Start: 1744312
End: 1744602
Strand: Direct
Name: acpP [H]
Synonym: CYB_1665
Alternate gene names: 86609125
Gene position: 1744312-1744602 (Clockwise)
Preceding gene: 86609120
Following gene: 86609126
Centisome position: 57.25
GC content: 54.3
Gene sequence:
>291_bases TTGGCCCGGCCAAGACACGCTGAATCGAGAGTTGGGATTCCAAGCATGAGCGCAGACGAAGTTTACAGCCGTGTTCGTAA GATCGTGTCCGATCAACTGGGCGTGGAAGATGACAAAGTGACCCCAGAAGCCAATTTCCAGAACGACCTGGGGGCCGACA GCCTTGATACGGTGGAGCTGGTCATGGCTTTTGAAGAGGAATTCGACCTGGAGATCCCCGATGAAGATGCAGAGGGGATC GCCACCGTGCAAGACGCTGTTAACTACATCCTCTCGAAGAAAGCTGCCTAG
Upstream 100 bases:
>100_bases ACACCTCCATACTCTGGCCGCAGCGGCAAATGCAGGTGAGGCTGCTCACAAGAGGGGATCCATTGTCCGATACAATAGGG ATTGCTTCATTGGCCGCTGG
Downstream 100 bases:
>100_bases TCTGCCCCCAGTTCTGACTCTATACCCCCGGGCTAACACCGGACGATGGCTACCACAGATCCCGCCACTGCTTACAGACC AACCCGCCGCGTTGTGATTA
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP [H]
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MARPRHAESRVGIPSMSADEVYSRVRKIVSDQLGVEDDKVTPEANFQNDLGADSLDTVELVMAFEEEFDLEIPDEDAEGI ATVQDAVNYILSKKAA
Sequences:
>Translated_96_residues MARPRHAESRVGIPSMSADEVYSRVRKIVSDQLGVEDDKVTPEANFQNDLGADSLDTVELVMAFEEEFDLEIPDEDAEGI ATVQDAVNYILSKKAA >Mature_95_residues ARPRHAESRVGIPSMSADEVYSRVRKIVSDQLGVEDDKVTPEANFQNDLGADSLDTVELVMAFEEEFDLEIPDEDAEGIA TVQDAVNYILSKKAA
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis [H]
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI4826852, Length=82, Percent_Identity=39.0243902439024, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1787336, Length=75, Percent_Identity=62.6666666666667, Blast_Score=95, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6322656, Length=82, Percent_Identity=40.2439024390244, Blast_Score=64, Evalue=5e-12, Organism=Drosophila melanogaster, GI17136932, Length=88, Percent_Identity=43.1818181818182, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136934, Length=80, Percent_Identity=40, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 [H]
Pfam domain/function: PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 10571; Mature: 10440
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRHAESRVGIPSMSADEVYSRVRKIVSDQLGVEDDKVTPEANFQNDLGADSLDTVEL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH VMAFEEEFDLEIPDEDAEGIATVQDAVNYILSKKAA HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARPRHAESRVGIPSMSADEVYSRVRKIVSDQLGVEDDKVTPEANFQNDLGADSLDTVEL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH VMAFEEEFDLEIPDEDAEGIATVQDAVNYILSKKAA HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA