Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is ybbP [H]

Identifier: 86609105

GI number: 86609105

Start: 1717559

End: 1718482

Strand: Direct

Name: ybbP [H]

Synonym: CYB_1645

Alternate gene names: 86609105

Gene position: 1717559-1718482 (Clockwise)

Preceding gene: 86609104

Following gene: 86609106

Centisome position: 56.37

GC content: 58.12

Gene sequence:

>924_bases
ATGCTGGCGGCCTTATGGGCTTGGCTACAGCAGTTTAACTTTCTCAGCCTCTTGGACTGGGCTCTGGCTGTCTTTCTGTT
GGCTTTGGCTCTCTACTACACCCGCGAAAGTCGTGCTGGGGTGCTGGTGAGGGGATTTATAGTGCTGCTGGTGCTGTACC
TGGCCACAGCCTCTCTCCCCTTGGTTCACCTGATCTTGGATCGCCTGCTCCTGGGCGCAGCTGTAGCCATGGGCGTGCTC
TTTCAACCGGAGTTTCGCCGGCTGCTGGAGCAGTTGGCAAGAGCCATCCGCATGGAGTGGCCGAGCAACGCAGGCGATGA
CGAGGAGGATCCTGAGGAAGATTTGGTGGAAGAACTGGTGCAAGCAGTGCGAGAACTTTCCCAAAACCGCACAGGAGCGC
TGATTGTGATTGAGCCGGAGCAACCAATTGACTCGCGGGTGTTTACCGACAAAGGAGTACCTCTCCAGGCGCGGGTGTCG
CGGGAGATCTTGCAGACCATTTTCCAGACTTCAACTTTGTTGCATGATGGGGCTGTGGTCATCCATCGGAATCGCATTCG
CGCAGCGGGGGTCATCCTGCCGGTTTCGGAGCGGGCCGCCTCCCGACAGCTGGGCACACGGCACCGCGCTGCGATGGGGA
TCACAGAGCAGACCAATTGCTTGTGTATTGTGGTCTCAGAAGAAACGGGATCCATTTCCCTGGCGGAGGGTGGGCGCATC
GAGCGGCCTCTGACCAGTGCCAAGTTACACGAACTGCTGGTACAGCGGTTGCGCAATCCCCGCGATGCCAAAAAACGAGA
TGCTCCGCTAAAGGGATTGTGGGCCCACCCCTGGTTTCGCAATGGGCCGCTGCGCTGGTGGGGATCCCTTGCCGATCTGA
CTAAACTCTTTCGCAAACCTGAGAAAACCCTCCCGAAAGACTGA

Upstream 100 bases:

>100_bases
AGGCTGGTCTGGGGGCCGCAGTCCAACAGGGGTTCTGAGGTGCAGAACGGCACCAGGCAGAAGGTCCGCAATGAGGGGAG
CGTGAACGGGGTTTTTCGCC

Downstream 100 bases:

>100_bases
TCCCCATGACCCTTTCTCCTGCCCATCTTCTGCAGTTGCCTGCCGACCTAGATCCGCAGTTGTTGCCCCGCCATGTGGCG
GTGGTGATGGATGGCAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLPLVHLILDRLLLGAAVAMGVL
FQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELVQAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVS
REILQTIFQTSTLLHDGAVVIHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI
ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKPEKTLPKD

Sequences:

>Translated_307_residues
MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLPLVHLILDRLLLGAAVAMGVL
FQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELVQAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVS
REILQTIFQTSTLLHDGAVVIHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI
ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKPEKTLPKD
>Mature_307_residues
MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLPLVHLILDRLLLGAAVAMGVL
FQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELVQAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVS
REILQTIFQTSTLLHDGAVVIHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI
ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKPEKTLPKD

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 34580; Mature: 34580

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLP
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LVHLILDRLLLGAAVAMGVLFQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
QAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVSREILQTIFQTSTLLHDGAVV
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
IHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI
EECCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCC
ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKP
CCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
EKTLPKD
CCCCCCC
>Mature Secondary Structure
MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLP
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LVHLILDRLLLGAAVAMGVLFQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
QAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVSREILQTIFQTSTLLHDGAVV
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
IHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI
EECCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCC
ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKP
CCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
EKTLPKD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]