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The map label for this gene is ydcM [C]

Identifier: 86609056

GI number: 86609056

Start: 1662796

End: 1663902

Strand: Direct

Name: ydcM [C]

Synonym: CYB_1591

Alternate gene names: 86609056

Gene position: 1662796-1663902 (Clockwise)

Preceding gene: 86609055

Following gene: 86609058

Centisome position: 54.58

GC content: 55.37

Gene sequence:

>1107_bases
ATGTACCTTGTCCGCAAGCTCAAGCTAGGCGTCTCAGAGCAACTGCAGCTGTTGAGCAGGGCAGCAGGCGAGCTGTACTC
AAAGGTGCTCGTTCACTTTTGGCGGGTTGTCCGCAAGAAGGGACTGTGGTTGAAACCTTCCACGCTAATGCGGTGGTTTC
CCAACGACCCTGAGAATACACTTCATGCTCACAGTGCAGACGCGGTAGTGCAAAGCTTCTTTGCCTCTTTGAAGTCCTGG
CGAGAACGCCGCCAAACCGACCCCAACGCCCGTCCACCTCGACGGCGTCGGTACTATTCCAAAGTTCAATGGAAGTCTTC
AGCCATCCAAGTCGTCAATGGAAAGCTGCGATTGTCGAACGGGAAAGGCAATGAGCCCCTGATGATTAACTGGGCTTGGG
ACACACCTGTTTGGGTAGAGATGGGCTGGGATGGCCAGCAGTATGAGTTGAGAGCTTGCTACAAGGTGGGGGATACGCTG
CCGGAAGAAGAGGGGGAAGAGAGCAACGTTGCCGCTGTGGATTTGGGTGAGATTCACCCCGCAGTCGCTCATGAGGGGGG
ACAAACCTACCTTGCCAATGGCAGGCTGCTGCGCTCCAAAAGGCGCTACCAGAACAAGCTGCAGGGCAAGCTAGCTCGAC
TCCTGGCGCGCAAAAAGCGGGGTTCTCGGCGGTGGAAGCGGCTAATCCGTTCCAATCGCGTGAGCGGGACGGAGTCCTTA
CGCCTGCAGCTCAAGAAGCTACACCACCAAATCCAAGACATTCTGCACAAGCAGACGACCAGACTGGTCTCCACGCTCCA
CGAGCGAGGCGTGCAGACAGTTGTGATTGGCGACATTCGGGATATCCGGATGTCTGCCAACTACAACAAGAAAGCGAATC
AGAAGATCCACCAGATGTTGCATGGTCAAGCTCGGCACCAAATCACTTACAAGGCCGAACGGCTGGGGATGAAGGTTGTG
CTGCAGGATGAGCAGTACAGCTCTCAGGAGTGTCCTGTTTGTGGGCAGAGAAACAAGCCCAAAGGTCGTGTGTACAGGTG
TGGGTGTGGGTTTGAGTTCCATCGGGACGGGGTGGGTGCAATTAACATTGTTGCTACGCAACGCTAA

Upstream 100 bases:

>100_bases
CGGCTGGGATAAAAACGATGACCAAAAAAACTGGGTTACAAGCCCCGCCCTTCTAGGGCGGCTTTTGTAAGATGCTATTC
GACAGAAAAGGCAACTTTGC

Downstream 100 bases:

>100_bases
CGCGAACGCAGGAAGTATCTGGGCTCCGGCCCAGTAGTTGGGGTTATGGCATCCCCCATAGGGTTGAGGTTGAGGACTCC
GTCCCGCTAACGCGAACAGC

Product: ISSoc14, transposase

Products: NA

Alternate protein names: IS Element ISTsi3 OrfB Probably Transposase; IS Element ISTsi1 OrfB Transposase; Neutral Protease; Transposase B; IS Element ISTsi1 OrfB Trasposase; Transposase OrfB For Insertion Sequence Element; ISSoc14 Transposase

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MYLVRKLKLGVSEQLQLLSRAAGELYSKVLVHFWRVVRKKGLWLKPSTLMRWFPNDPENTLHAHSADAVVQSFFASLKSW
RERRQTDPNARPPRRRRYYSKVQWKSSAIQVVNGKLRLSNGKGNEPLMINWAWDTPVWVEMGWDGQQYELRACYKVGDTL
PEEEGEESNVAAVDLGEIHPAVAHEGGQTYLANGRLLRSKRRYQNKLQGKLARLLARKKRGSRRWKRLIRSNRVSGTESL
RLQLKKLHHQIQDILHKQTTRLVSTLHERGVQTVVIGDIRDIRMSANYNKKANQKIHQMLHGQARHQITYKAERLGMKVV
LQDEQYSSQECPVCGQRNKPKGRVYRCGCGFEFHRDGVGAINIVATQR

Sequences:

>Translated_368_residues
MYLVRKLKLGVSEQLQLLSRAAGELYSKVLVHFWRVVRKKGLWLKPSTLMRWFPNDPENTLHAHSADAVVQSFFASLKSW
RERRQTDPNARPPRRRRYYSKVQWKSSAIQVVNGKLRLSNGKGNEPLMINWAWDTPVWVEMGWDGQQYELRACYKVGDTL
PEEEGEESNVAAVDLGEIHPAVAHEGGQTYLANGRLLRSKRRYQNKLQGKLARLLARKKRGSRRWKRLIRSNRVSGTESL
RLQLKKLHHQIQDILHKQTTRLVSTLHERGVQTVVIGDIRDIRMSANYNKKANQKIHQMLHGQARHQITYKAERLGMKVV
LQDEQYSSQECPVCGQRNKPKGRVYRCGCGFEFHRDGVGAINIVATQR
>Mature_368_residues
MYLVRKLKLGVSEQLQLLSRAAGELYSKVLVHFWRVVRKKGLWLKPSTLMRWFPNDPENTLHAHSADAVVQSFFASLKSW
RERRQTDPNARPPRRRRYYSKVQWKSSAIQVVNGKLRLSNGKGNEPLMINWAWDTPVWVEMGWDGQQYELRACYKVGDTL
PEEEGEESNVAAVDLGEIHPAVAHEGGQTYLANGRLLRSKRRYQNKLQGKLARLLARKKRGSRRWKRLIRSNRVSGTESL
RLQLKKLHHQIQDILHKQTTRLVSTLHERGVQTVVIGDIRDIRMSANYNKKANQKIHQMLHGQARHQITYKAERLGMKVV
LQDEQYSSQECPVCGQRNKPKGRVYRCGCGFEFHRDGVGAINIVATQR

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42616; Mature: 42616

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLVRKLKLGVSEQLQLLSRAAGELYSKVLVHFWRVVRKKGLWLKPSTLMRWFPNDPENT
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
LHAHSADAVVQSFFASLKSWRERRQTDPNARPPRRRRYYSKVQWKSSAIQVVNGKLRLSN
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCEEEECC
GKGNEPLMINWAWDTPVWVEMGWDGQQYELRACYKVGDTLPEEEGEESNVAAVDLGEIHP
CCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCH
AVAHEGGQTYLANGRLLRSKRRYQNKLQGKLARLLARKKRGSRRWKRLIRSNRVSGTESL
HHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RLQLKKLHHQIQDILHKQTTRLVSTLHERGVQTVVIGDIRDIRMSANYNKKANQKIHQML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHHH
HGQARHQITYKAERLGMKVVLQDEQYSSQECPVCGQRNKPKGRVYRCGCGFEFHRDGVGA
CCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCE
INIVATQR
EEEEEECC
>Mature Secondary Structure
MYLVRKLKLGVSEQLQLLSRAAGELYSKVLVHFWRVVRKKGLWLKPSTLMRWFPNDPENT
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
LHAHSADAVVQSFFASLKSWRERRQTDPNARPPRRRRYYSKVQWKSSAIQVVNGKLRLSN
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCEEEECC
GKGNEPLMINWAWDTPVWVEMGWDGQQYELRACYKVGDTLPEEEGEESNVAAVDLGEIHP
CCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCH
AVAHEGGQTYLANGRLLRSKRRYQNKLQGKLARLLARKKRGSRRWKRLIRSNRVSGTESL
HHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RLQLKKLHHQIQDILHKQTTRLVSTLHERGVQTVVIGDIRDIRMSANYNKKANQKIHQML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHHH
HGQARHQITYKAERLGMKVVLQDEQYSSQECPVCGQRNKPKGRVYRCGCGFEFHRDGVGA
CCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCE
INIVATQR
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA