Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609058

Identifier: 86609058

GI number: 86609058

Start: 1665589

End: 1667337

Strand: Direct

Name: 86609058

Synonym: CYB_1593

Alternate gene names: NA

Gene position: 1665589-1667337 (Clockwise)

Preceding gene: 86609056

Following gene: 86609062

Centisome position: 54.67

GC content: 61.23

Gene sequence:

>1749_bases
ATGAGCCCCCGCAAGCGGCTGTTTTGGTTAATGGCAACTTTTCTCCTTGGAATTCTGGCTGCTTGTGGGCTAGCTAGCGG
GCCCAGCCTCCTCAGTCGCCCAGAGACTTCATCGCCCGCCCCAGAAGGAGGCGTTGCTGCCTACTACGACGGCAACCCGC
AATCGGTAACCATCCGCGATGCCGCCATTGCCTTTGCCATTGCCAGCGGGATCACCCAGCCCAGCCAGATTGTCAGCTTT
GTCAACACCGTTTTGCGGGTGCAGCCTCCTCTCACCTTGGCTGAGGTGACCACGGCCGACCCCAATCCGGTGGCCATCTC
CGATTTTGATGGGGATGGCACGCCAGGCACCATTCGGGATGCGGCTATTTTGTTTGCCATTGCCACTTTGCAGACCCGCG
ATGCCAACCGCATCAACACCTTCGTCAACACCGTTTTGCGGCTGCAACCTCCCCTCAACCTTACGCCTGAACAAGCGGCC
AGATTGCCAGGGCCGGGATTTGTTCCGCCCACAGGGCTTCCAACCGCCTCGCCTTCGCCGTCACCACCTGGGATCCCCAC
CCTGGGGGTGCCGCAGGCGGTTACAGGGCGCTTGACCACCAGTAGCCCTCGGGATCCCCGTCGTCCTACTCACTTCATTC
AGGATTTCCTGCTCAGCGCGCCTGCGGGGCAAACGGTGCGGATCCAGCTTTCCAGTATCGACTTCGATACTTACCTTTTC
ATCGTTAACCAGGCTACCGGCGAGGTGATTGCCGAAAACGACGACTTTGGGGGGAGTACGAATTCCCAGCTCGACTTGGT
TGTGCAAGCTGGAATCAACTACTTGGTGCGGGTTAGCAGTTATGACCCTGGTGCTACGGGTGCTTTCCAGCTTAGGACTG
CTCTGGTTGCCCCGGCACCCACTCCTTCTCCCACGGCTTCGCCCACTCCCTCTGCTGGCGGCTTCAACATCGAGATTGAA
TTCATCGACAACAGCCTCAGCCCTTCCCAGCGCAACATCGTTCTGCAAGCGGCCCGGCGCTGGGAGCAGATCATCACCGG
GGATCTGCCTGATGTAACCGTAACTCTGGAGGCTGGCTTCTGCGGAGCTGGTTTCCCCCCGACTCCCCTGGTCAACCGGC
CTGTGGATGATCTCTTGGTTCAAGTAACCGGCGCCCGGCTCCTCTCCAGCCCCCCTGAGAGTGATGGTCCGGGTAAGGCT
GTGGGTCAAGCGGGCCCCTGTGGCCCCCTTCGGCCCGGGATCGGCATCATCCCCTATGCCAGGATAGGGATCGACCCGGC
ATATCTGGGTCGCTTAGAGGATCAGGGATCCCTGTTTGACGTTGTCCTGCACGAGCTGGGCCATGCTCTGGGGTTTGGCA
CCGTCCCCAACTGGCGTCCTCTTCTCCTCAACAGCGGCACCTCCAACCCGCGCTTTGCCGGCCGGCAGGCCACTGCTGAG
TACAACAGCCTGGGCGGATCGGGGAATGTGCCGGTGGAGGTTGAGCCACCTCCCGAAGGTCACTGGCGGCGAACCCTAGG
GTTGGAGCTGATGACGCCGGTGCTGCCACCGCCACCTGCACGCCCTGCTCTTAGTCGTATTACGGCTGCAGCCATGCAGG
ACCTGGGGTACCCAGGCGTTAACCTGGCTGCTGCGGATCCCTATACCCTGCCTCCAGAAGGGCGCCGCCTGCCCCCAGGG
GAGGGGCTCTTCCTTGGCAACGACGCTGTTTTTGGCCCAATTGGGGGTGAGATAGAGCTTTTGCCCTAG

Upstream 100 bases:

>100_bases
ACTGAGGCAAATCCAGAAAAGCCTGAGGATGGTATAGTGGTGGGGTGTTTTGTAACTACCTAACCTAGAATTCAGGGGAG
TCGGGAAGAGGGATCCTTCG

Downstream 100 bases:

>100_bases
CCGAGTACCTTCCAAAAAAGGCCCCCTAGCGGGGCCAGCAGGGGGAGGAGTCAAGCTTAAAGAGGAGGGAGAACTTTATG
CTTCAGGCAAGGGTTCATAG

Product: M8 family peptidase

Products: NA

Alternate protein names: Lipoprotein; Zinc Metalloendopeptidase; Pkd Domain Containing Protein; Parallel Beta-Helix Repeat Protein; Peptidase-Like

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MSPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRDAAIAFAIASGITQPSQIVSF
VNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRDAAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAA
RLPGPGFVPPTGLPTASPSPSPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF
IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAPTPSPTASPTPSAGGFNIEIE
FIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGFCGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKA
VGQAGPCGPLRPGIGIIPYARIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE
YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGVNLAAADPYTLPPEGRRLPPG
EGLFLGNDAVFGPIGGEIELLP

Sequences:

>Translated_582_residues
MSPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRDAAIAFAIASGITQPSQIVSF
VNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRDAAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAA
RLPGPGFVPPTGLPTASPSPSPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF
IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAPTPSPTASPTPSAGGFNIEIE
FIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGFCGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKA
VGQAGPCGPLRPGIGIIPYARIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE
YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGVNLAAADPYTLPPEGRRLPPG
EGLFLGNDAVFGPIGGEIELLP
>Mature_581_residues
SPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRDAAIAFAIASGITQPSQIVSFV
NTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRDAAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAAR
LPGPGFVPPTGLPTASPSPSPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLFI
VNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAPTPSPTASPTPSAGGFNIEIEF
IDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGFCGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKAV
GQAGPCGPLRPGIGIIPYARIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAEY
NSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGVNLAAADPYTLPPEGRRLPPGE
GLFLGNDAVFGPIGGEIELLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60905; Mature: 60774

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEH
AAIAFAIASGITQPSQIVSFVNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRD
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHH
AAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAARLPGPGFVPPTGLPTASPSP
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
SPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF
CCCCCCCCCCCHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE
IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAP
EEECCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCC
TPSPTASPTPSAGGFNIEIEFIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGF
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
CGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKAVGQAGPCGPLRPGIGIIPYA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE
HHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHH
YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGV
HHCCCCCCCCCEEECCCCCCCCHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
NLAAADPYTLPPEGRRLPPGEGLFLGNDAVFGPIGGEIELLP
EEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEEEECC
>Mature Secondary Structure 
SPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRD
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEH
AAIAFAIASGITQPSQIVSFVNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRD
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHH
AAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAARLPGPGFVPPTGLPTASPSP
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
SPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF
CCCCCCCCCCCHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE
IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAP
EEECCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCC
TPSPTASPTPSAGGFNIEIEFIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGF
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
CGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKAVGQAGPCGPLRPGIGIIPYA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE
HHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHH
YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGV
HHCCCCCCCCCEEECCCCCCCCHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
NLAAADPYTLPPEGRRLPPGEGLFLGNDAVFGPIGGEIELLP
EEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA