| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609058
Identifier: 86609058
GI number: 86609058
Start: 1665589
End: 1667337
Strand: Direct
Name: 86609058
Synonym: CYB_1593
Alternate gene names: NA
Gene position: 1665589-1667337 (Clockwise)
Preceding gene: 86609056
Following gene: 86609062
Centisome position: 54.67
GC content: 61.23
Gene sequence:
>1749_bases ATGAGCCCCCGCAAGCGGCTGTTTTGGTTAATGGCAACTTTTCTCCTTGGAATTCTGGCTGCTTGTGGGCTAGCTAGCGG GCCCAGCCTCCTCAGTCGCCCAGAGACTTCATCGCCCGCCCCAGAAGGAGGCGTTGCTGCCTACTACGACGGCAACCCGC AATCGGTAACCATCCGCGATGCCGCCATTGCCTTTGCCATTGCCAGCGGGATCACCCAGCCCAGCCAGATTGTCAGCTTT GTCAACACCGTTTTGCGGGTGCAGCCTCCTCTCACCTTGGCTGAGGTGACCACGGCCGACCCCAATCCGGTGGCCATCTC CGATTTTGATGGGGATGGCACGCCAGGCACCATTCGGGATGCGGCTATTTTGTTTGCCATTGCCACTTTGCAGACCCGCG ATGCCAACCGCATCAACACCTTCGTCAACACCGTTTTGCGGCTGCAACCTCCCCTCAACCTTACGCCTGAACAAGCGGCC AGATTGCCAGGGCCGGGATTTGTTCCGCCCACAGGGCTTCCAACCGCCTCGCCTTCGCCGTCACCACCTGGGATCCCCAC CCTGGGGGTGCCGCAGGCGGTTACAGGGCGCTTGACCACCAGTAGCCCTCGGGATCCCCGTCGTCCTACTCACTTCATTC AGGATTTCCTGCTCAGCGCGCCTGCGGGGCAAACGGTGCGGATCCAGCTTTCCAGTATCGACTTCGATACTTACCTTTTC ATCGTTAACCAGGCTACCGGCGAGGTGATTGCCGAAAACGACGACTTTGGGGGGAGTACGAATTCCCAGCTCGACTTGGT TGTGCAAGCTGGAATCAACTACTTGGTGCGGGTTAGCAGTTATGACCCTGGTGCTACGGGTGCTTTCCAGCTTAGGACTG CTCTGGTTGCCCCGGCACCCACTCCTTCTCCCACGGCTTCGCCCACTCCCTCTGCTGGCGGCTTCAACATCGAGATTGAA TTCATCGACAACAGCCTCAGCCCTTCCCAGCGCAACATCGTTCTGCAAGCGGCCCGGCGCTGGGAGCAGATCATCACCGG GGATCTGCCTGATGTAACCGTAACTCTGGAGGCTGGCTTCTGCGGAGCTGGTTTCCCCCCGACTCCCCTGGTCAACCGGC CTGTGGATGATCTCTTGGTTCAAGTAACCGGCGCCCGGCTCCTCTCCAGCCCCCCTGAGAGTGATGGTCCGGGTAAGGCT GTGGGTCAAGCGGGCCCCTGTGGCCCCCTTCGGCCCGGGATCGGCATCATCCCCTATGCCAGGATAGGGATCGACCCGGC ATATCTGGGTCGCTTAGAGGATCAGGGATCCCTGTTTGACGTTGTCCTGCACGAGCTGGGCCATGCTCTGGGGTTTGGCA CCGTCCCCAACTGGCGTCCTCTTCTCCTCAACAGCGGCACCTCCAACCCGCGCTTTGCCGGCCGGCAGGCCACTGCTGAG TACAACAGCCTGGGCGGATCGGGGAATGTGCCGGTGGAGGTTGAGCCACCTCCCGAAGGTCACTGGCGGCGAACCCTAGG GTTGGAGCTGATGACGCCGGTGCTGCCACCGCCACCTGCACGCCCTGCTCTTAGTCGTATTACGGCTGCAGCCATGCAGG ACCTGGGGTACCCAGGCGTTAACCTGGCTGCTGCGGATCCCTATACCCTGCCTCCAGAAGGGCGCCGCCTGCCCCCAGGG GAGGGGCTCTTCCTTGGCAACGACGCTGTTTTTGGCCCAATTGGGGGTGAGATAGAGCTTTTGCCCTAG
Upstream 100 bases:
>100_bases ACTGAGGCAAATCCAGAAAAGCCTGAGGATGGTATAGTGGTGGGGTGTTTTGTAACTACCTAACCTAGAATTCAGGGGAG TCGGGAAGAGGGATCCTTCG
Downstream 100 bases:
>100_bases CCGAGTACCTTCCAAAAAAGGCCCCCTAGCGGGGCCAGCAGGGGGAGGAGTCAAGCTTAAAGAGGAGGGAGAACTTTATG CTTCAGGCAAGGGTTCATAG
Product: M8 family peptidase
Products: NA
Alternate protein names: Lipoprotein; Zinc Metalloendopeptidase; Pkd Domain Containing Protein; Parallel Beta-Helix Repeat Protein; Peptidase-Like
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MSPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRDAAIAFAIASGITQPSQIVSF VNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRDAAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAA RLPGPGFVPPTGLPTASPSPSPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAPTPSPTASPTPSAGGFNIEIE FIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGFCGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKA VGQAGPCGPLRPGIGIIPYARIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGVNLAAADPYTLPPEGRRLPPG EGLFLGNDAVFGPIGGEIELLP
Sequences:
>Translated_582_residues MSPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRDAAIAFAIASGITQPSQIVSF VNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRDAAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAA RLPGPGFVPPTGLPTASPSPSPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAPTPSPTASPTPSAGGFNIEIE FIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGFCGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKA VGQAGPCGPLRPGIGIIPYARIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGVNLAAADPYTLPPEGRRLPPG EGLFLGNDAVFGPIGGEIELLP >Mature_581_residues SPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRDAAIAFAIASGITQPSQIVSFV NTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRDAAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAAR LPGPGFVPPTGLPTASPSPSPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLFI VNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAPTPSPTASPTPSAGGFNIEIEF IDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGFCGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKAV GQAGPCGPLRPGIGIIPYARIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAEY NSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGVNLAAADPYTLPPEGRRLPPGE GLFLGNDAVFGPIGGEIELLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60905; Mature: 60774
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRD CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEH AAIAFAIASGITQPSQIVSFVNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRD HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHH AAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAARLPGPGFVPPTGLPTASPSP HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC SPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF CCCCCCCCCCCHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAP EEECCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCC TPSPTASPTPSAGGFNIEIEFIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGF CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC CGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKAVGQAGPCGPLRPGIGIIPYA CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE HHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHH YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGV HHCCCCCCCCCEEECCCCCCCCHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC NLAAADPYTLPPEGRRLPPGEGLFLGNDAVFGPIGGEIELLP EEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEEEECC >Mature Secondary Structure SPRKRLFWLMATFLLGILAACGLASGPSLLSRPETSSPAPEGGVAAYYDGNPQSVTIRD CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEH AAIAFAIASGITQPSQIVSFVNTVLRVQPPLTLAEVTTADPNPVAISDFDGDGTPGTIRD HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHH AAILFAIATLQTRDANRINTFVNTVLRLQPPLNLTPEQAARLPGPGFVPPTGLPTASPSP HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC SPPGIPTLGVPQAVTGRLTTSSPRDPRRPTHFIQDFLLSAPAGQTVRIQLSSIDFDTYLF CCCCCCCCCCCHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE IVNQATGEVIAENDDFGGSTNSQLDLVVQAGINYLVRVSSYDPGATGAFQLRTALVAPAP EEECCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCC TPSPTASPTPSAGGFNIEIEFIDNSLSPSQRNIVLQAARRWEQIITGDLPDVTVTLEAGF CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC CGAGFPPTPLVNRPVDDLLVQVTGARLLSSPPESDGPGKAVGQAGPCGPLRPGIGIIPYA CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RIGIDPAYLGRLEDQGSLFDVVLHELGHALGFGTVPNWRPLLLNSGTSNPRFAGRQATAE HHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHH YNSLGGSGNVPVEVEPPPEGHWRRTLGLELMTPVLPPPPARPALSRITAAAMQDLGYPGV HHCCCCCCCCCEEECCCCCCCCHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC NLAAADPYTLPPEGRRLPPGEGLFLGNDAVFGPIGGEIELLP EEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA