| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609028
Identifier: 86609028
GI number: 86609028
Start: 1636487
End: 1637269
Strand: Direct
Name: 86609028
Synonym: CYB_1564
Alternate gene names: NA
Gene position: 1636487-1637269 (Clockwise)
Preceding gene: 86609026
Following gene: 86609033
Centisome position: 53.71
GC content: 61.3
Gene sequence:
>783_bases ATGAAAACCCCGATACAATGCCTAGCCCTACACTTGGGAGAATGGCACGGCCTCTTTTCTGACTATCGACCTACTGCCCA CGGTGGTTGGGAGCTAGTAGGCCAAAAGCGCAGCCTCATTACCTTTGAGGCTTTGGAGTTGGGCGCGATCCGCCAAACCA ATGCCTACTACCCCCTGGAGGGATCCCCCACTCCCGAAAGCTCCCAGAGCTGGGTCTACCAGGATTTCTCGCCGGGATTG CGCTTTTTCCCCGATGGATCTTTTTCCAATGGGCGGCTGCAGCTGGCGCCGTTTAGTGATTTTGCCGTCGAGCAGGGCTT TCTCTGGGGGGATCGCAAGGCGCGGCTGGTGCAACAGTGGGATGCCCAAGGTCGTCTGGTAGAGGTAACCGCGATCCTGG AGCGGCGCGGCCAAGCTTTGGATCCCGTTGCAGACTGTGCACCCCTGAGCAGAGAGCAGCTGAGAGCCTGCCTCCAGGGG AGATGGCGGGGGATCGCCCAGAGCTTTGCGGTTGCCGAGGGCCGGTTTGCCGAAACCGAGGTGGACTCCTCGGGGGCAGA GTGGTTGAGCAACTGGGATCCCTTGCCGGGAGGGCTGTGGATTGGCGGGCCGGATCCCTTGCCCATCCCCACTGCCCAGC GGGATCGCAGCTTTTCGGTAAGCCTGAGCTGGTTTCCGCAGCCGGAAGACTGCCACTGTCTCTTGCGTTTGAGCCGAGAC TACGATGCCCGCGGTGCTTGGCAGCGGGTTACGCTGATCCGGGCGCAGAAGGATCCTGGTTGA
Upstream 100 bases:
>100_bases CTTTCATCAGAAAGCTGATGTTATCCCCAAAAGGTAAAATACCACCCCGGAGCTTCTTCCCCATCGGCTCTGTCTTCAAC GTTGCACTTCAGGCTTCTTC
Downstream 100 bases:
>100_bases GGAAGGCGCAAACCTGGTCAAACACCGTTTCCCGCTCGCAGTCCAAAGTGAGGATGTGGTCGGAGTGCTCCAGCCAAGAC AAGATCTTCTCCTCGGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKTPIQCLALHLGEWHGLFSDYRPTAHGGWELVGQKRSLITFEALELGAIRQTNAYYPLEGSPTPESSQSWVYQDFSPGL RFFPDGSFSNGRLQLAPFSDFAVEQGFLWGDRKARLVQQWDAQGRLVEVTAILERRGQALDPVADCAPLSREQLRACLQG RWRGIAQSFAVAEGRFAETEVDSSGAEWLSNWDPLPGGLWIGGPDPLPIPTAQRDRSFSVSLSWFPQPEDCHCLLRLSRD YDARGAWQRVTLIRAQKDPG
Sequences:
>Translated_260_residues MKTPIQCLALHLGEWHGLFSDYRPTAHGGWELVGQKRSLITFEALELGAIRQTNAYYPLEGSPTPESSQSWVYQDFSPGL RFFPDGSFSNGRLQLAPFSDFAVEQGFLWGDRKARLVQQWDAQGRLVEVTAILERRGQALDPVADCAPLSREQLRACLQG RWRGIAQSFAVAEGRFAETEVDSSGAEWLSNWDPLPGGLWIGGPDPLPIPTAQRDRSFSVSLSWFPQPEDCHCLLRLSRD YDARGAWQRVTLIRAQKDPG >Mature_260_residues MKTPIQCLALHLGEWHGLFSDYRPTAHGGWELVGQKRSLITFEALELGAIRQTNAYYPLEGSPTPESSQSWVYQDFSPGL RFFPDGSFSNGRLQLAPFSDFAVEQGFLWGDRKARLVQQWDAQGRLVEVTAILERRGQALDPVADCAPLSREQLRACLQG RWRGIAQSFAVAEGRFAETEVDSSGAEWLSNWDPLPGGLWIGGPDPLPIPTAQRDRSFSVSLSWFPQPEDCHCLLRLSRD YDARGAWQRVTLIRAQKDPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29145; Mature: 29145
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPIQCLALHLGEWHGLFSDYRPTAHGGWELVGQKRSLITFEALELGAIRQTNAYYPLE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEHHHCCCEECCCCEECCC GSPTPESSQSWVYQDFSPGLRFFPDGSFSNGRLQLAPFSDFAVEQGFLWGDRKARLVQQW CCCCCCCCCCEEEECCCCCCEECCCCCCCCCEEEEECCHHHHHHCCCEECCHHHHHHHHH DAQGRLVEVTAILERRGQALDPVADCAPLSREQLRACLQGRWRGIAQSFAVAEGRFAETE CCCCCEEHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VDSSGAEWLSNWDPLPGGLWIGGPDPLPIPTAQRDRSFSVSLSWFPQPEDCHCLLRLSRD CCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCC YDARGAWQRVTLIRAQKDPG CCCCCCEEEEEEEEECCCCC >Mature Secondary Structure MKTPIQCLALHLGEWHGLFSDYRPTAHGGWELVGQKRSLITFEALELGAIRQTNAYYPLE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEHHHCCCEECCCCEECCC GSPTPESSQSWVYQDFSPGLRFFPDGSFSNGRLQLAPFSDFAVEQGFLWGDRKARLVQQW CCCCCCCCCCEEEECCCCCCEECCCCCCCCCEEEEECCHHHHHHCCCEECCHHHHHHHHH DAQGRLVEVTAILERRGQALDPVADCAPLSREQLRACLQGRWRGIAQSFAVAEGRFAETE CCCCCEEHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VDSSGAEWLSNWDPLPGGLWIGGPDPLPIPTAQRDRSFSVSLSWFPQPEDCHCLLRLSRD CCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCC YDARGAWQRVTLIRAQKDPG CCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA