Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609033

Identifier: 86609033

GI number: 86609033

Start: 1639869

End: 1640783

Strand: Direct

Name: 86609033

Synonym: CYB_1569

Alternate gene names: NA

Gene position: 1639869-1640783 (Clockwise)

Preceding gene: 86609028

Following gene: 86609037

Centisome position: 53.82

GC content: 58.58

Gene sequence:

>915_bases
GTGCCTACACCGACACCTACACCGACCCCAACTCCAACACCCACCCCAACCCCGACGCCCACCCCCACCCCAACCCCGAC
ACCTACGCCCACAACGGGTGCCCCGACTTTTAGCAAGGCATTTAGCCCCACCTCGGTAGCTGCCGGCCCTACTGCCAAAA
CAACCCTGACCTACACGATCACCAACACAGCCGCTCTGCCGCTGACTGGTCTATCTTTTTCCGACACCTTGCCTGCCGGC
TTGATCGTTGCCACTCCCAACAACCTCAACAACGGCTGTGGCGGGACGCTGGCAGCTGCACCAGGAGCAACTTCCATCTT
GCTGGTCAACGGCTCATTGGCAGCCAACGCTAGCTGCACCATCAGCCTGGATCTTCAGGTTACAGCCACGACAGCGGGAT
CCCTGACCAGCCCCGCGGTAACCCTGAGCAGCAACCAAGCGCCCAATGCTACCGCTGCGGCTATCAACCTAACGGTAACG
GTGCCAGCTCCCACCTTTACCATGGCCTTTGCTCCCAACCCGCTTGGCCCAATTGGCCCAGCTCCCGTTACCGGGAATGG
AACTCTGACGTTTACAATAACCAACAACGCAGCCATTCCATTGACGGGCTTGGCCTTTAACCACACCTTGCCGGGAGCGC
CGTCTTCTGGTTTGCAAGTTGCCGCTGCGGGGATTTTTACACCTTCGTGCGGCTCCCCCACTCTCACAGCTCCGGTGAAC
GGGAACACCATTCAATTCACCGGAGGACAAGTAGCCGTAGGAGGAACTTGCACAGTGACCATCCCTGTAAAAACAGCGGT
AGCTTTGACACCAGCCGGTACCTATACTTACCCCAACTCCCCGGTGACGTTGAACAGCACTCAGGCTGCCCCTGTTACAG
CGGGGCCAGTAACCTGGACAGTTGTAGTGAATTAG

Upstream 100 bases:

>100_bases
CTATAAATTATTCTCTCTATCCTAACATAAGATCAACACGACCTAAGAGCAAGTCTGAAGGAGCTATTCCCTAGGTGGCG
GCGGAAGCGGTGGGACGATA

Downstream 100 bases:

>100_bases
TCCTTCAAAAGCAGCTCGGCAATTTGAAGGGCGTTGAGGGCCGCACCTTTGCGGATTTGATCCCCGCACAGCCACAGCTC
CAGGGCCTTGGGCTCGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTTGAPTFSKAFSPTSVAAGPTAKTTLTYTITNTAALPLTGLSFSDTLPAG
LIVATPNNLNNGCGGTLAAAPGATSILLVNGSLAANASCTISLDLQVTATTAGSLTSPAVTLSSNQAPNATAAAINLTVT
VPAPTFTMAFAPNPLGPIGPAPVTGNGTLTFTITNNAAIPLTGLAFNHTLPGAPSSGLQVAAAGIFTPSCGSPTLTAPVN
GNTIQFTGGQVAVGGTCTVTIPVKTAVALTPAGTYTYPNSPVTLNSTQAAPVTAGPVTWTVVVN

Sequences:

>Translated_304_residues
MPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTTGAPTFSKAFSPTSVAAGPTAKTTLTYTITNTAALPLTGLSFSDTLPAG
LIVATPNNLNNGCGGTLAAAPGATSILLVNGSLAANASCTISLDLQVTATTAGSLTSPAVTLSSNQAPNATAAAINLTVT
VPAPTFTMAFAPNPLGPIGPAPVTGNGTLTFTITNNAAIPLTGLAFNHTLPGAPSSGLQVAAAGIFTPSCGSPTLTAPVN
GNTIQFTGGQVAVGGTCTVTIPVKTAVALTPAGTYTYPNSPVTLNSTQAAPVTAGPVTWTVVVN
>Mature_303_residues
PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTTGAPTFSKAFSPTSVAAGPTAKTTLTYTITNTAALPLTGLSFSDTLPAGL
IVATPNNLNNGCGGTLAAAPGATSILLVNGSLAANASCTISLDLQVTATTAGSLTSPAVTLSSNQAPNATAAAINLTVTV
PAPTFTMAFAPNPLGPIGPAPVTGNGTLTFTITNNAAIPLTGLAFNHTLPGAPSSGLQVAAAGIFTPSCGSPTLTAPVNG
NTIQFTGGQVAVGGTCTVTIPVKTAVALTPAGTYTYPNSPVTLNSTQAAPVTAGPVTWTVVVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29594; Mature: 29462

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTTGAPTFSKAFSPTSVAAGPTAKTTLTYTI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEE
TNTAALPLTGLSFSDTLPAGLIVATPNNLNNGCGGTLAAAPGATSILLVNGSLAANASCT
ECCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEE
ISLDLQVTATTAGSLTSPAVTLSSNQAPNATAAAINLTVTVPAPTFTMAFAPNPLGPIGP
EEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCC
APVTGNGTLTFTITNNAAIPLTGLAFNHTLPGAPSSGLQVAAAGIFTPSCGSPTLTAPVN
CCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCC
GNTIQFTGGQVAVGGTCTVTIPVKTAVALTPAGTYTYPNSPVTLNSTQAAPVTAGPVTWT
CCEEEECCCEEEECCEEEEEEEEEEEEEEECCCCEECCCCCEEECCCCCCCEEECCEEEE
VVVN
EEEC
>Mature Secondary Structure 
PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTTGAPTFSKAFSPTSVAAGPTAKTTLTYTI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEE
TNTAALPLTGLSFSDTLPAGLIVATPNNLNNGCGGTLAAAPGATSILLVNGSLAANASCT
ECCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEE
ISLDLQVTATTAGSLTSPAVTLSSNQAPNATAAAINLTVTVPAPTFTMAFAPNPLGPIGP
EEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCC
APVTGNGTLTFTITNNAAIPLTGLAFNHTLPGAPSSGLQVAAAGIFTPSCGSPTLTAPVN
CCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCC
GNTIQFTGGQVAVGGTCTVTIPVKTAVALTPAGTYTYPNSPVTLNSTQAAPVTAGPVTWT
CCEEEECCCEEEECCEEEEEEEEEEEEEEECCCCEECCCCCEEECCCCCCCEEECCEEEE
VVVN
EEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA