| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is coaX
Identifier: 86608977
GI number: 86608977
Start: 1582707
End: 1583471
Strand: Direct
Name: coaX
Synonym: CYB_1510
Alternate gene names: 86608977
Gene position: 1582707-1583471 (Clockwise)
Preceding gene: 86608976
Following gene: 86608978
Centisome position: 51.95
GC content: 66.41
Gene sequence:
>765_bases ATGAGTTTTGAGGAGGGGGCAGATCTCAACGCTTCGCACTGTTGTCGTGAGTGGCTGGCAGCCGTGCTGGGCAACACTCA CGTGCGCTGGGGTTGGTTTGTGGAGGAGACCCTGGTGAAGGTGGAGCGGTTTCCTGCTCACCAGCCCTTGTCCTGGCCGC AGCAGACAGAGCTGTGGCTGGCTCCTGTGGGCTCTGCCCCCCTGCCGCCAGCATCGCCCTGGGTGCATCAGTTGGAGCTG TCGCAGGTGCCGCTGCGGGATCCCTACCCGGGGTTGGGGCTGGATCGGGCCTTGGCCCTGTGGGCTGCCGGGATCCACTA CGGCTGGCCCTGTTTGGTCATCGACGCGGGTACTGCCCTGACCCTCACAGGAGCTGACTCTGAAGGATCCCTGGTGGGAG GGGCCATCTTGCCCGGCCTGGGGTTGCAGGCGCAGGCGTTGGCTGATCACACAGCCCTGCTGCCCAAAGTGCAGTGGGAT CCGCAGGATCCCTTGCCCCCTCGCTGGGCCAACGACACCGTGGCTGCCATCCGCAGCGGCATCCTCCACACCCTCTTGGC TGGCTTGCGCGAGTTCATTGCCGACTGGCGTCGCCGCTTTCCCCAAGGCCCCCTGCTGCTGACCGGCGGGGATGGGAAGT GGCTCCACCCTCACTTGGGCCCGCTTGACCCAGAGCTGCGCTGGGATCCCCACCTGGTGTTGCGGGGAATTGCCGGCTGC CGCCAGCTGCACCGCACTGCCCGCCACTCCCCTAGTGCAGAATAG
Upstream 100 bases:
>100_bases GCTTTGACGACAGAATGGCAGCTTGCTACCGCTAAGAGGTTGGCCGGGATCCCTGTCGACCAGCCGGTGGAGCTGTTTCG CGTGGAGGCAGAGCTGTTGC
Downstream 100 bases:
>100_bases AAAACAGTCTCTCCCAGCCGCCTGCGAGTAACGGCTTCTTGCTTGGGGATCCCATGGCCAACGGCAACTCCTTCGGTGTC CTGTTTTGCGTGACCACCTA
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSFEEGADLNASHCCREWLAAVLGNTHVRWGWFVEETLVKVERFPAHQPLSWPQQTELWLAPVGSAPLPPASPWVHQLEL SQVPLRDPYPGLGLDRALALWAAGIHYGWPCLVIDAGTALTLTGADSEGSLVGGAILPGLGLQAQALADHTALLPKVQWD PQDPLPPRWANDTVAAIRSGILHTLLAGLREFIADWRRRFPQGPLLLTGGDGKWLHPHLGPLDPELRWDPHLVLRGIAGC RQLHRTARHSPSAE
Sequences:
>Translated_254_residues MSFEEGADLNASHCCREWLAAVLGNTHVRWGWFVEETLVKVERFPAHQPLSWPQQTELWLAPVGSAPLPPASPWVHQLEL SQVPLRDPYPGLGLDRALALWAAGIHYGWPCLVIDAGTALTLTGADSEGSLVGGAILPGLGLQAQALADHTALLPKVQWD PQDPLPPRWANDTVAAIRSGILHTLLAGLREFIADWRRRFPQGPLLLTGGDGKWLHPHLGPLDPELRWDPHLVLRGIAGC RQLHRTARHSPSAE >Mature_253_residues SFEEGADLNASHCCREWLAAVLGNTHVRWGWFVEETLVKVERFPAHQPLSWPQQTELWLAPVGSAPLPPASPWVHQLELS QVPLRDPYPGLGLDRALALWAAGIHYGWPCLVIDAGTALTLTGADSEGSLVGGAILPGLGLQAQALADHTALLPKVQWDP QDPLPPRWANDTVAAIRSGILHTLLAGLREFIADWRRRFPQGPLLLTGGDGKWLHPHLGPLDPELRWDPHLVLRGIAGCR QLHRTARHSPSAE
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_SYNJB (Q2JLD5)
Other databases:
- EMBL: CP000240 - RefSeq: YP_477739.1 - ProteinModelPortal: Q2JLD5 - SMR: Q2JLD5 - STRING: Q2JLD5 - GeneID: 3901509 - GenomeReviews: CP000240_GR - KEGG: cyb:CYB_1510 - TIGR: CYB_1510 - eggNOG: COG1521 - HOGENOM: HBG634537 - OMA: HWGYFQG - ProtClustDB: PRK13331 - BioCyc: SSP321332:CYB_1510-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 27836; Mature: 27705
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: ACT_SITE 95-95 BINDING 89-89 BINDING 118-118 BINDING 173-173
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEEGADLNASHCCREWLAAVLGNTHVRWGWFVEETLVKVERFPAHQPLSWPQQTELWL CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE APVGSAPLPPASPWVHQLELSQVPLRDPYPGLGLDRALALWAAGIHYGWPCLVIDAGTAL EECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEE TLTGADSEGSLVGGAILPGLGLQAQALADHTALLPKVQWDPQDPLPPRWANDTVAAIRSG EEECCCCCCCEECHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH ILHTLLAGLREFIADWRRRFPQGPLLLTGGDGKWLHPHLGPLDPELRWDPHLVLRGIAGC HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH RQLHRTARHSPSAE HHHHHHHCCCCCCC >Mature Secondary Structure SFEEGADLNASHCCREWLAAVLGNTHVRWGWFVEETLVKVERFPAHQPLSWPQQTELWL CCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE APVGSAPLPPASPWVHQLELSQVPLRDPYPGLGLDRALALWAAGIHYGWPCLVIDAGTAL EECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEE TLTGADSEGSLVGGAILPGLGLQAQALADHTALLPKVQWDPQDPLPPRWANDTVAAIRSG EEECCCCCCCEECHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH ILHTLLAGLREFIADWRRRFPQGPLLLTGGDGKWLHPHLGPLDPELRWDPHLVLRGIAGC HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH RQLHRTARHSPSAE HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA