| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is aroC [H]
Identifier: 86608978
GI number: 86608978
Start: 1583525
End: 1584661
Strand: Direct
Name: aroC [H]
Synonym: CYB_1511
Alternate gene names: 86608978
Gene position: 1583525-1584661 (Clockwise)
Preceding gene: 86608977
Following gene: 86608979
Centisome position: 51.98
GC content: 66.49
Gene sequence:
>1137_bases ATGGCCAACGGCAACTCCTTCGGTGTCCTGTTTTGCGTGACCACCTATGGCGAGTCCCACGGGGGGGCGGTGGGGGTGGT GGTGGATGGCTGCCCGCCGCGGCTGCCCTTGAGCGAGGCCGACATTCAGGCAGAGCTGGATCGGCGGCGTCCTGGCCAGA GCCCCATCACGACGCCCCGCCAGGAAGCGGATCGCTGCCAGATCCTCTCCGGGGTTTTTCAGGGCTTTACGCTGGGCACC CCCATCCACATCCTGGTGCGCAACCAAGATGCCCGCCCCCAGGACTACCAGGAGATGGCCACCACCTTCCGCCCTTCCCA TGCCGATGCCACCTACCAGGCCAAGTACGGCATCCGCAACTGGCAGGGGGGCGGACGGGCCTCAGCGCGAGAAACCATTG GCCGGGTGGCTGCCGGGGCCATTGCCAAGAAGATCCTGCGCCTAGCGGCAGGGGTGGAGATCCTGGCCTACGTGCAGCGG GTAAAAGACGTGGAAGCCCAGGTGGATCCCAGCTCGGTAACTGCAGAGCAGGTGGAGGCCAACATCGTCCGCTGCCCCGA TCCCCAAGCGGCGGCGGCCATGATCCAAAAAATTGAGGAGGCGGCGCGGGAAGGGGATTCGCTGGGGGGAGTGGTGGAGT GTGTAGCCCGCCGGGTGCCGCGCGGGCTGGGATCCCCGGTGTTTGACAAGCTGGAGGCCGACTTGGCCAAGGCGGTGATG TCCCTGCCAGCCAGCAAGGGGTTTGAGATTGGCTCGGGGTTTGCCGGCACCTACCTGACGGGCAAGCAGCACAACGACGA GTTTTACATGACCCCCGGCGGCTGGCGCACCCGCAGCAACCGCTCCGGCGGCATCCAGGGGGGCATCAGCAACGGCGAAG ACATCGTCCTGCGGGTAGCCTTTAAGCCCACTGCCACCATTCGCCAGCCTCAAAACACCGTCACCCTCAATGGGCAAGAG ACGGTTTTGGCGGCGCGGGGACGCCACGATCCCTGTGTCTTGCCGCGGGCAGTGCCGATGGTGGAGGCGATGGTGGCCCT GGTCCTCTGCGACCATCTGCTGCGCCACCACGCCCAGTGCGGATCCCTGGTCTTGTCGGAGGTGCCCCTCCCTGTCGCCG CTGCTCCCCAGGCCTAG
Upstream 100 bases:
>100_bases GCCGCCAGCTGCACCGCACTGCCCGCCACTCCCCTAGTGCAGAATAGAAAACAGTCTCTCCCAGCCGCCTGCGAGTAACG GCTTCTTGCTTGGGGATCCC
Downstream 100 bases:
>100_bases GAGTCCCCGGCTATGGCCAAGGCCAAAACCGTCTGGGAGTGCAGCCAGTGCGGCGAGCGCTATGCCAAGTTTTTGGGCCG CTGCGACCATTGCGGCGCCT
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MANGNSFGVLFCVTTYGESHGGAVGVVVDGCPPRLPLSEADIQAELDRRRPGQSPITTPRQEADRCQILSGVFQGFTLGT PIHILVRNQDARPQDYQEMATTFRPSHADATYQAKYGIRNWQGGGRASARETIGRVAAGAIAKKILRLAAGVEILAYVQR VKDVEAQVDPSSVTAEQVEANIVRCPDPQAAAAMIQKIEEAAREGDSLGGVVECVARRVPRGLGSPVFDKLEADLAKAVM SLPASKGFEIGSGFAGTYLTGKQHNDEFYMTPGGWRTRSNRSGGIQGGISNGEDIVLRVAFKPTATIRQPQNTVTLNGQE TVLAARGRHDPCVLPRAVPMVEAMVALVLCDHLLRHHAQCGSLVLSEVPLPVAAAPQA
Sequences:
>Translated_378_residues MANGNSFGVLFCVTTYGESHGGAVGVVVDGCPPRLPLSEADIQAELDRRRPGQSPITTPRQEADRCQILSGVFQGFTLGT PIHILVRNQDARPQDYQEMATTFRPSHADATYQAKYGIRNWQGGGRASARETIGRVAAGAIAKKILRLAAGVEILAYVQR VKDVEAQVDPSSVTAEQVEANIVRCPDPQAAAAMIQKIEEAAREGDSLGGVVECVARRVPRGLGSPVFDKLEADLAKAVM SLPASKGFEIGSGFAGTYLTGKQHNDEFYMTPGGWRTRSNRSGGIQGGISNGEDIVLRVAFKPTATIRQPQNTVTLNGQE TVLAARGRHDPCVLPRAVPMVEAMVALVLCDHLLRHHAQCGSLVLSEVPLPVAAAPQA >Mature_377_residues ANGNSFGVLFCVTTYGESHGGAVGVVVDGCPPRLPLSEADIQAELDRRRPGQSPITTPRQEADRCQILSGVFQGFTLGTP IHILVRNQDARPQDYQEMATTFRPSHADATYQAKYGIRNWQGGGRASARETIGRVAAGAIAKKILRLAAGVEILAYVQRV KDVEAQVDPSSVTAEQVEANIVRCPDPQAAAAMIQKIEEAAREGDSLGGVVECVARRVPRGLGSPVFDKLEADLAKAVMS LPASKGFEIGSGFAGTYLTGKQHNDEFYMTPGGWRTRSNRSGGIQGGISNGEDIVLRVAFKPTATIRQPQNTVTLNGQET VLAARGRHDPCVLPRAVPMVEAMVALVLCDHLLRHHAQCGSLVLSEVPLPVAAAPQA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=366, Percent_Identity=51.3661202185792, Blast_Score=335, Evalue=2e-93, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=54.7683923705722, Blast_Score=398, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 40291; Mature: 40160
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGNSFGVLFCVTTYGESHGGAVGVVVDGCPPRLPLSEADIQAELDRRRPGQSPITTPR CCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCH QEADRCQILSGVFQGFTLGTPIHILVRNQDARPQDYQEMATTFRPSHADATYQAKYGIRN HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC WQGGGRASARETIGRVAAGAIAKKILRLAAGVEILAYVQRVKDVEAQVDPSSVTAEQVEA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC NIVRCPDPQAAAAMIQKIEEAAREGDSLGGVVECVARRVPRGLGSPVFDKLEADLAKAVM CEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH SLPASKGFEIGSGFAGTYLTGKQHNDEFYMTPGGWRTRSNRSGGIQGGISNGEDIVLRVA HCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEE FKPTATIRQPQNTVTLNGQETVLAARGRHDPCVLPRAVPMVEAMVALVLCDHLLRHHAQC ECCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GSLVLSEVPLPVAAAPQA HHHHHHHCCCCCCCCCCC >Mature Secondary Structure ANGNSFGVLFCVTTYGESHGGAVGVVVDGCPPRLPLSEADIQAELDRRRPGQSPITTPR CCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCH QEADRCQILSGVFQGFTLGTPIHILVRNQDARPQDYQEMATTFRPSHADATYQAKYGIRN HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC WQGGGRASARETIGRVAAGAIAKKILRLAAGVEILAYVQRVKDVEAQVDPSSVTAEQVEA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC NIVRCPDPQAAAAMIQKIEEAAREGDSLGGVVECVARRVPRGLGSPVFDKLEADLAKAVM CEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH SLPASKGFEIGSGFAGTYLTGKQHNDEFYMTPGGWRTRSNRSGGIQGGISNGEDIVLRVA HCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEE FKPTATIRQPQNTVTLNGQETVLAARGRHDPCVLPRAVPMVEAMVALVLCDHLLRHHAQC ECCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GSLVLSEVPLPVAAAPQA HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA