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The map label for this gene is psbE [H]

Identifier: 86608962

GI number: 86608962

Start: 1572633

End: 1572878

Strand: Direct

Name: psbE [H]

Synonym: CYB_1495

Alternate gene names: 86608962

Gene position: 1572633-1572878 (Clockwise)

Preceding gene: 86608960

Following gene: 86608963

Centisome position: 51.62

GC content: 54.88

Gene sequence:

>246_bases
ATGGCTGGCAGCACCGGAGAGCGACCTTTTGTCGATATCATTACCAGTGTCCGCTACTGGGTTATTCACGCCCTGACCAT
TCCCGCTTTGTTTTTGGCAGGCTGGCTTTTTGTGAGCACCGGCCTGGCCTATGATATTTTTGGCACCCCACGCCCCAATG
AGTATTTCACGGCAGAACGCCAGGAGTTGCCGATCGTCAGCGATCGCTTCAATGCTCTGGAGGAGTTGGAGAGGCTGACT
CGCTAG

Upstream 100 bases:

>100_bases
GGTCTCGTAACTTGTAGTTGTGCATCCAAATCCTTATCATTGTGTTATAGACTCAGAAAGTTCAGAAAGCACTTTTGCCC
CTACCCTAGGGAGGAGTTTC

Downstream 100 bases:

>100_bases
GAGTGCCCGTGGGTAAGTGGACTATTCGTTGTTGCAATTTGTAAGTTGATTGAGCTTTTTGCGTAGGGTGATATCTATGG
CCACTAAATCTGATGAACCC

Product: cytochrome b559 subunit alpha

Products: NA

Alternate protein names: PSII reaction center subunit V [H]

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MAGSTGERPFVDIITSVRYWVIHALTIPALFLAGWLFVSTGLAYDIFGTPRPNEYFTAERQELPIVSDRFNALEELERLT
R

Sequences:

>Translated_81_residues
MAGSTGERPFVDIITSVRYWVIHALTIPALFLAGWLFVSTGLAYDIFGTPRPNEYFTAERQELPIVSDRFNALEELERLT
R
>Mature_80_residues
AGSTGERPFVDIITSVRYWVIHALTIPALFLAGWLFVSTGLAYDIFGTPRPNEYFTAERQELPIVSDRFNALEELERLTR

Specific function: This b-type cytochrome is tightly associated with the reaction center of photosystem II and possibly is part of the water-oxidation complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbE/psbF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006217
- InterPro:   IPR006216
- InterPro:   IPR013081
- InterPro:   IPR013082 [H]

Pfam domain/function: PF00283 Cytochrom_B559; PF00284 Cytochrom_B559a [H]

EC number: NA

Molecular weight: Translated: 9248; Mature: 9116

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00537 CYTOCHROME_B559

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSTGERPFVDIITSVRYWVIHALTIPALFLAGWLFVSTGLAYDIFGTPRPNEYFTAER
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC
QELPIVSDRFNALEELERLTR
CCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGSTGERPFVDIITSVRYWVIHALTIPALFLAGWLFVSTGLAYDIFGTPRPNEYFTAER
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC
QELPIVSDRFNALEELERLTR
CCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA