Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608946

Identifier: 86608946

GI number: 86608946

Start: 1553929

End: 1554426

Strand: Reverse

Name: 86608946

Synonym: CYB_1479

Alternate gene names: NA

Gene position: 1554426-1553929 (Counterclockwise)

Preceding gene: 86608957

Following gene: 86608945

Centisome position: 51.02

GC content: 65.46

Gene sequence:

>498_bases
ATGAGATCCCTTTTCCCTCTCTGCCTGGCCGGAGCGCTGCTCTGGGGATCCTCGCTGCCCGCCCAGACCCAGGGGATTAG
GCCCCTCTTTCCCGAACCTTCCCAAACCCCGCTGCCCCCCAGCCCGGACATTCCCACCTTGCCCATCGTGCCGGATCCCC
GGCCTGTGCCGGCAACCCCTGCTCCCCAGCGACCGCTGCCCAGGGGGAGTTTTGAGGAGATCAGCCGCTACTTCCGCGAT
CTCAACCGCGCCAAAAACCTGGCCCGCCAAGCTGCCGAGATCGCCAATGGGGGCCTGCAGCGCTATCGCGCCGAAGCTTC
CATGCACGGGGCAGCCATCGACTCGCCGTTTGAAGAGTTTGAAGACGCCTGGATCTTCACCTTCCGGGGGGGAGAGCCCG
GCTTCGTCCAGCCCAGCATCGAAACCCAGGTGCGGGTAGACAGGCGCACCTTTCAAACCACCATCCTCTACAACGGCCCC
ATCCGCTCCCGCCGCTGA

Upstream 100 bases:

>100_bases
TTGGGAAACAGCAACCAGGCTTTTTCCTCTGCTTGTTGGGGAGAGAGGCTCAGTAGAGTAGTGATTCCAGCTAGATCACT
CACTGGTAGAGGAACTGCCT

Downstream 100 bases:

>100_bases
CGGCAGCCTGGGATCCCTGCCATCCTTGGCATAATCAGAAAAGGGCGAGGGATCCGGGGTATGACCAAGTTTGTCTTCGT
CACCGGTGGAGTGGTCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRSLFPLCLAGALLWGSSLPAQTQGIRPLFPEPSQTPLPPSPDIPTLPIVPDPRPVPATPAPQRPLPRGSFEEISRYFRD
LNRAKNLARQAAEIANGGLQRYRAEASMHGAAIDSPFEEFEDAWIFTFRGGEPGFVQPSIETQVRVDRRTFQTTILYNGP
IRSRR

Sequences:

>Translated_165_residues
MRSLFPLCLAGALLWGSSLPAQTQGIRPLFPEPSQTPLPPSPDIPTLPIVPDPRPVPATPAPQRPLPRGSFEEISRYFRD
LNRAKNLARQAAEIANGGLQRYRAEASMHGAAIDSPFEEFEDAWIFTFRGGEPGFVQPSIETQVRVDRRTFQTTILYNGP
IRSRR
>Mature_165_residues
MRSLFPLCLAGALLWGSSLPAQTQGIRPLFPEPSQTPLPPSPDIPTLPIVPDPRPVPATPAPQRPLPRGSFEEISRYFRD
LNRAKNLARQAAEIANGGLQRYRAEASMHGAAIDSPFEEFEDAWIFTFRGGEPGFVQPSIETQVRVDRRTFQTTILYNGP
IRSRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18392; Mature: 18392

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLFPLCLAGALLWGSSLPAQTQGIRPLFPEPSQTPLPPSPDIPTLPIVPDPRPVPATP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APQRPLPRGSFEEISRYFRDLNRAKNLARQAAEIANGGLQRYRAEASMHGAAIDSPFEEF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EDAWIFTFRGGEPGFVQPSIETQVRVDRRTFQTTILYNGPIRSRR
CCCEEEEEECCCCCEECCCCCHHHEEHHHEEEEEEEECCCCCCCC
>Mature Secondary Structure
MRSLFPLCLAGALLWGSSLPAQTQGIRPLFPEPSQTPLPPSPDIPTLPIVPDPRPVPATP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APQRPLPRGSFEEISRYFRDLNRAKNLARQAAEIANGGLQRYRAEASMHGAAIDSPFEEF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EDAWIFTFRGGEPGFVQPSIETQVRVDRRTFQTTILYNGPIRSRR
CCCEEEEEECCCCCEECCCCCHHHEEHHHEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA