| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pyrG [H]
Identifier: 86608945
GI number: 86608945
Start: 1552234
End: 1553868
Strand: Reverse
Name: pyrG [H]
Synonym: CYB_1478
Alternate gene names: 86608945
Gene position: 1553868-1552234 (Counterclockwise)
Preceding gene: 86608946
Following gene: 86608942
Centisome position: 51.0
GC content: 60.12
Gene sequence:
>1635_bases ATGACCAAGTTTGTCTTCGTCACCGGTGGAGTGGTCTCCAGCATCGGCAAAGGCATTGTGGCGGCCAGCTTGGGTCGCCT GCTCAAATCCCGTAACTACACGGTGTCGATTTTGAAGCTGGATCCCTATATCAATGTGGATCCCGGCACCATGAGCCCCT ACCAACATGGGGAAGTGTTTGTTACCGACGATGGCGCCGAGACGGACTTGGACTTGGGCCACTACGAGCGCTTCACCGAC ACCAACATGTCCAAGCTCAACAACGTTACCACCGGCGCCATCTACCAGGCGGTGATCCACAAAGAGCGGCGGGGGGATTA CCAGGGCAGCACGGTGCAGGTGATCCCCCACGTCACCCAAGAGATTAAAGAGCGCATCCGGCGAGTGGCCCGCGAGACCA ACCCCGACGTGGTGCTGGTGGAGGTGGGGGGCACGGTGGGGGATATCGAGTCTTTGCCCTTTTTGGAGGCCATCCGCCAA TTTCGCAAGGATGTGGGCCGGGCCAATGTCGCCTATGTGCATGTCACCCTGGTGCCCCTGATCAAAGCGGCAGGGGAGAT GAAAACCAAGCCCACCCAGCACTCGGTGAAGGAGCTGCGCTCTATTGGTATCCAGCCGGACGTGTTGGTGTGCCGCTGCG AACAGCCATTGCCCCGCGGGATCAAGGAGAAGATCTCCGAGTTTTGCGATGTGCCGGTGGAATGTGTGATTCAGGCTCAG GATGCCCCCAGTATCTACGATGTGCCTTTGGTGCTCGAGCAGGAGGGGTTGGCGCAGCGGGTTTTGGAGATCCTCAACCT GGATCCCCAGCAGCCCGACCTACGGGAGTGGGAGCTCCTGGTGCAGCGGCTGCACCACCCCCAAGAGCAGGTGGAGATTG CCATTGTCGGCAAATACGTGCGCCTTACGGATGCCTATCTTTCGGTGGCCGAGGCCCTGCGCCATGCCGGGTTGGCCCTC AATGCCGGCGTCACGCTGCGCTGGATCTCTTCTGAGGAGATCGAAGAGCGGGGACCAGAGGCATTGCTTTCCGGCGTGGA TGGAGTGGTGGTGCCAGGGGGGTTTGGCAATCGCGGCATCGAGGGCAAAGTGGCCAGTATTTGCTACGTGAGGGAGCGGG GCATTCCCTTTCTGGGCCTGTGTCTGGGCATGCAATGCGCGGTGATCGACTGGGGATGTCACATTGCCCAACTGGAGCGG GCCAATAGCTATGAGTTTGACCCCGATACCCCCCACCCTGTCATCAGCCTGCTGCCGGAGCAGAAAGATGTAGAGGATCT GGGAGGAACCCTGCGGCTGGGCCTCTATCCCTGTCGCATCATGCCCAATACCCTAGCGGCCAAGCTCTACGGTGAGGCCA TCATCTACGAGCGGCACCGCCATCGCTATGAGTTTAACAATGCCTACCGCAGCCTTTTTCTAGACTCCGGCTATGTTATC AGCGGAGTCTCGCCGGATAACCGCTTGGTGGAGATTATCGAGCTGCCCAGCCACCCCTTCTTCATCGCCACCCAATTCCA TCCGGAGTTTCGCTCCCGCCCCAACCGCCCCCACCCCCTCTTTTTGGGGTTGATCGAAGCTGCCCTGCGCAGCCGCCCTC AGCCTCGCCCCCTGCAGTTGCAGAAGATGGGCTAG
Upstream 100 bases:
>100_bases CACCATCCTCTACAACGGCCCCATCCGCTCCCGCCGCTGACGGCAGCCTGGGATCCCTGCCATCCTTGGCATAATCAGAA AAGGGCGAGGGATCCGGGGT
Downstream 100 bases:
>100_bases TTGACAGATCCCTTGTCCAAAAGTGGGGGCACGCCTCTGGTCCTGGTTCTGCAGAGCTTTGCTGAACATAAACTGCTGCG GAATCCTGGGTTTCGCCTGT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MTKFVFVTGGVVSSIGKGIVAASLGRLLKSRNYTVSILKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTD TNMSKLNNVTTGAIYQAVIHKERRGDYQGSTVQVIPHVTQEIKERIRRVARETNPDVVLVEVGGTVGDIESLPFLEAIRQ FRKDVGRANVAYVHVTLVPLIKAAGEMKTKPTQHSVKELRSIGIQPDVLVCRCEQPLPRGIKEKISEFCDVPVECVIQAQ DAPSIYDVPLVLEQEGLAQRVLEILNLDPQQPDLREWELLVQRLHHPQEQVEIAIVGKYVRLTDAYLSVAEALRHAGLAL NAGVTLRWISSEEIEERGPEALLSGVDGVVVPGGFGNRGIEGKVASICYVRERGIPFLGLCLGMQCAVIDWGCHIAQLER ANSYEFDPDTPHPVISLLPEQKDVEDLGGTLRLGLYPCRIMPNTLAAKLYGEAIIYERHRHRYEFNNAYRSLFLDSGYVI SGVSPDNRLVEIIELPSHPFFIATQFHPEFRSRPNRPHPLFLGLIEAALRSRPQPRPLQLQKMG
Sequences:
>Translated_544_residues MTKFVFVTGGVVSSIGKGIVAASLGRLLKSRNYTVSILKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTD TNMSKLNNVTTGAIYQAVIHKERRGDYQGSTVQVIPHVTQEIKERIRRVARETNPDVVLVEVGGTVGDIESLPFLEAIRQ FRKDVGRANVAYVHVTLVPLIKAAGEMKTKPTQHSVKELRSIGIQPDVLVCRCEQPLPRGIKEKISEFCDVPVECVIQAQ DAPSIYDVPLVLEQEGLAQRVLEILNLDPQQPDLREWELLVQRLHHPQEQVEIAIVGKYVRLTDAYLSVAEALRHAGLAL NAGVTLRWISSEEIEERGPEALLSGVDGVVVPGGFGNRGIEGKVASICYVRERGIPFLGLCLGMQCAVIDWGCHIAQLER ANSYEFDPDTPHPVISLLPEQKDVEDLGGTLRLGLYPCRIMPNTLAAKLYGEAIIYERHRHRYEFNNAYRSLFLDSGYVI SGVSPDNRLVEIIELPSHPFFIATQFHPEFRSRPNRPHPLFLGLIEAALRSRPQPRPLQLQKMG >Mature_543_residues TKFVFVTGGVVSSIGKGIVAASLGRLLKSRNYTVSILKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTDT NMSKLNNVTTGAIYQAVIHKERRGDYQGSTVQVIPHVTQEIKERIRRVARETNPDVVLVEVGGTVGDIESLPFLEAIRQF RKDVGRANVAYVHVTLVPLIKAAGEMKTKPTQHSVKELRSIGIQPDVLVCRCEQPLPRGIKEKISEFCDVPVECVIQAQD APSIYDVPLVLEQEGLAQRVLEILNLDPQQPDLREWELLVQRLHHPQEQVEIAIVGKYVRLTDAYLSVAEALRHAGLALN AGVTLRWISSEEIEERGPEALLSGVDGVVVPGGFGNRGIEGKVASICYVRERGIPFLGLCLGMQCAVIDWGCHIAQLERA NSYEFDPDTPHPVISLLPEQKDVEDLGGTLRLGLYPCRIMPNTLAAKLYGEAIIYERHRHRYEFNNAYRSLFLDSGYVIS GVSPDNRLVEIIELPSHPFFIATQFHPEFRSRPNRPHPLFLGLIEAALRSRPQPRPLQLQKMG
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=48.0943738656987, Blast_Score=506, Evalue=1e-143, Organism=Homo sapiens, GI28559085, Length=547, Percent_Identity=46.9835466179159, Blast_Score=492, Evalue=1e-139, Organism=Homo sapiens, GI28559083, Length=547, Percent_Identity=46.9835466179159, Blast_Score=492, Evalue=1e-139, Organism=Homo sapiens, GI221316689, Length=547, Percent_Identity=46.9835466179159, Blast_Score=492, Evalue=1e-139, Organism=Escherichia coli, GI1789142, Length=537, Percent_Identity=54.5623836126629, Blast_Score=582, Evalue=1e-167, Organism=Caenorhabditis elegans, GI25148299, Length=602, Percent_Identity=38.0398671096345, Blast_Score=423, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6322563, Length=559, Percent_Identity=43.4704830053667, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6319432, Length=558, Percent_Identity=43.010752688172, Blast_Score=459, Evalue=1e-130, Organism=Drosophila melanogaster, GI24664469, Length=548, Percent_Identity=47.6277372262774, Blast_Score=493, Evalue=1e-139, Organism=Drosophila melanogaster, GI21357815, Length=493, Percent_Identity=46.4503042596349, Blast_Score=419, Evalue=1e-117,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60679; Mature: 60547
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVFVTGGVVSSIGKGIVAASLGRLLKSRNYTVSILKLDPYINVDPGTMSPYQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTDTNMSKLNNVTTGAIYQAVIHKERRGDYQGSTVQVIPHVTQ EECCCCCCCCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHH EIKERIRRVARETNPDVVLVEVGGTVGDIESLPFLEAIRQFRKDVGRANVAYVHVTLVPL HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHH IKAAGEMKTKPTQHSVKELRSIGIQPDVLVCRCEQPLPRGIKEKISEFCDVPVECVIQAQ HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEC DAPSIYDVPLVLEQEGLAQRVLEILNLDPQQPDLREWELLVQRLHHPQEQVEIAIVGKYV CCCCEECCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHEEEEEEEHHH RLTDAYLSVAEALRHAGLALNAGVTLRWISSEEIEERGPEALLSGVDGVVVPGGFGNRGI HHHHHHHHHHHHHHHCCEEEECCEEEEECCCHHHHHCCHHHHHCCCCCEEECCCCCCCCC EGKVASICYVRERGIPFLGLCLGMQCAVIDWGCHIAQLERANSYEFDPDTPHPVISLLPE CCCHHEEEEEHHCCCCHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHCCC QKDVEDLGGTLRLGLYPCRIMPNTLAAKLYGEAIIYERHRHRYEFNNAYRSLFLDSGYVI CCCHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEE SGVSPDNRLVEIIELPSHPFFIATQFHPEFRSRPNRPHPLFLGLIEAALRSRPQPRPLQL ECCCCCCCEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC QKMG CCCC >Mature Secondary Structure TKFVFVTGGVVSSIGKGIVAASLGRLLKSRNYTVSILKLDPYINVDPGTMSPYQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTDTNMSKLNNVTTGAIYQAVIHKERRGDYQGSTVQVIPHVTQ EECCCCCCCCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHH EIKERIRRVARETNPDVVLVEVGGTVGDIESLPFLEAIRQFRKDVGRANVAYVHVTLVPL HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHH IKAAGEMKTKPTQHSVKELRSIGIQPDVLVCRCEQPLPRGIKEKISEFCDVPVECVIQAQ HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEC DAPSIYDVPLVLEQEGLAQRVLEILNLDPQQPDLREWELLVQRLHHPQEQVEIAIVGKYV CCCCEECCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHEEEEEEEHHH RLTDAYLSVAEALRHAGLALNAGVTLRWISSEEIEERGPEALLSGVDGVVVPGGFGNRGI HHHHHHHHHHHHHHHCCEEEECCEEEEECCCHHHHHCCHHHHHCCCCCEEECCCCCCCCC EGKVASICYVRERGIPFLGLCLGMQCAVIDWGCHIAQLERANSYEFDPDTPHPVISLLPE CCCHHEEEEEHHCCCCHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHCCC QKDVEDLGGTLRLGLYPCRIMPNTLAAKLYGEAIIYERHRHRYEFNNAYRSLFLDSGYVI CCCHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEE SGVSPDNRLVEIIELPSHPFFIATQFHPEFRSRPNRPHPLFLGLIEAALRSRPQPRPLQL ECCCCCCCEEEEEECCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC QKMG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA