The gene/protein map for NC_006396 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86608923

Identifier: 86608923

GI number: 86608923

Start: 1530948

End: 1533032

Strand: Reverse

Name: 86608923

Synonym: CYB_1455

Alternate gene names: NA

Gene position: 1533032-1530948 (Counterclockwise)

Preceding gene: 86608924

Following gene: 86608922

Centisome position: 50.32

GC content: 63.88

Gene sequence:

>2085_bases
GTGCGGGTGCCCCTCGACTATTATCGGGTTTTGATGCTGTCGGCACGGGCAGATGAGCATCAGATTGAACAGGCATACCG
GGAGCGGATCGATCTCAAGCCGGGCGAGCGCTCCTGGCTGTCGGGGTTCTCGCCACAGGCTGTGGAAGCTCGCGCCCAGA
TGATCCAAGAGGCGGCTTCTGTGCTGCTGAACCCTGAGGCACGACGAAACTACGACGAACACCTCATGCCAACGGATCCC
ACCTTGACGGTGGAGGAGGCGCACCTACCGGGAGTGCTGTGCTTGTATTGCGAAGCCGGAGAGTACCAGGCTGCGTTGGA
CTTGGCTCAACACCTGTTGGAGCAGGGCCACCCTGCTCGTTCCGATGCCATTTTGGCGCGGGCCATCGCTCGTCTGGAAC
TGGGTCGAGAAGCCTGGCAACAGGGATCCTATGAAGAGGCGGCGCGTTCCCTACAGGCGGGCTTGGCGGAGCTGGAGGAG
TATCAGGCCTTTCCGCAGATGCAAGCGGAGATCCGTATCGATTTGGGCAAGCTGCGTCCCTATCGCATTTTGCAACTCCT
CAGCCACGAGGCCCATGCTCCCGCCCCAGCCGGAAGAGAGACTCTTGTGCTCCGCACCGCTGATGCGAATGGGGAGCGGC
AGCAGGGACTGGCTCTCCTCAAAGCCATGCTGGACGAACGGGGCGGCATCGAGGGGATGGGGCAAGATGGCTCTGGCCTC
AGCACCGAAGATTTCCTGCGCTTTATCCAACGGGTACGTCGCCACCTCACCCTCAAAGAACAGCAGGAGTTGTTCGAGCG
GGAGGCTGAGCGTCCCTCGATGGTGGCCGCCTACTTGGCCGTGCAGGTGTTGCTGGCGGCAGGTTATCTGGAAAACCGCC
CGGCTCTGGTGCGGCGTGCTCGCGGCTACCTGGCTCGTCTGGCGCAGCGGCAGGATGTGCATCTGGAGCAGGCCATCTGT
AGTCTGTTGCTGGGGCAGACCGAAGACGCGCTCGCCCATCTGCGCTCCACCCAAGAAGTAGAGGCCTTGCAGTTTATCGA
AGAACACTCCGCCGGTTCTCCCGACCATCTGCCGGGTCTGTGCCGCTTCACAGAAAAATGGTTTCAGGAGGAGGTGTTCC
CGGAGTTCCGCGGTCTGGAAGCCGCCCAAGTGACGTTGCAAGCCTACTTCGACAACCCCCAAGTACAAGCTTACCTGGAC
GAAATGCCCAGCCGCGAAGACCCGCCGGCAGGGATGCTCTCTCCCAGTGCTCCGCACCGCTGTCGCGAACAAGCCCCCCA
TCCCCCACCTCATTTGCCTGCCGTGGTGGGTCCTGAGCCAACCCAGGAATTGTATCGCCCACCCGCCCCTTGGCAACAGG
GGGTGCCAGAACCCCCGCGCCTCTCGGATTTGCCCTCTTACCGCAGCACCCCCAAGGCGGGCGTCTCTGCTCTTGCGGAT
GAGAGTTCTAGTGCTCCGCACCGCTGTCGCGAACGCGCCCAAGACCGTTCCCCTCAGGGGGACGGAGTCCAGGGCCTAAG
GTCCGCTGGCGCGATCGGTTTGCAGGATGTGGAGCGTTACCGCCGCAGCCGCTTGGGATCCCGTAAGCGTCCTGCCCTTC
CCGCCGTGGGCTTCGCACCGCTGACGCGAGTGGCCGGGGTAGTTGGTGTGGGCATTCTCTCCCTGCTGGTCATCTGGCAA
ATGCTGCGGGGCCTCTTCACGCCGCCGCCGGCACCACCGCTGGAGCAACCCCAGGTGCAAATTGAGCAGCCGCCGGTTGA
CATATCGCTACGCGACGCCTCCGCGAACGACAATCCCGGCCAGACAGAACCCGCTCCCCCGCCTGAGCTAACTGGCCCTC
TGGCGGAGTGGCAAGGAGTACAACAGGTGCGGGTGGTCTCCAACGATGGCCTCAACATTCGCCAGCAACCCAGCCTGACG
GGAGCCATTGTCGGGACAGCCCCACGCCAAGCCCTGCTGCGGGTGGTGGAGGTGCAGGCTGGGGAGGGACAGGTGCCCGT
CTGGCTGCGCATCGAGCGAGATGGCGCGCCCGGGGGATGGGTCGCCGCCCAGTCGGGCTCCACCCGTCTGGTGGAACGGC
TCTAG

Upstream 100 bases:

>100_bases
TTACCCACGAAAAGGACTACAGTTAAGTCGATGCGGGTAAGTTGTCCAAGGACTCCGTCCCGCTGGCACGAACAGGAGAG
CGCGGACAAAAACCATGACG

Downstream 100 bases:

>100_bases
CTCTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCGATAGCATCCTGTTTGTTTCCAAACAG
AATGGCGGTATCCCGCAAAG

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MRVPLDYYRVLMLSARADEHQIEQAYRERIDLKPGERSWLSGFSPQAVEARAQMIQEAASVLLNPEARRNYDEHLMPTDP
TLTVEEAHLPGVLCLYCEAGEYQAALDLAQHLLEQGHPARSDAILARAIARLELGREAWQQGSYEEAARSLQAGLAELEE
YQAFPQMQAEIRIDLGKLRPYRILQLLSHEAHAPAPAGRETLVLRTADANGERQQGLALLKAMLDERGGIEGMGQDGSGL
STEDFLRFIQRVRRHLTLKEQQELFEREAERPSMVAAYLAVQVLLAAGYLENRPALVRRARGYLARLAQRQDVHLEQAIC
SLLLGQTEDALAHLRSTQEVEALQFIEEHSAGSPDHLPGLCRFTEKWFQEEVFPEFRGLEAAQVTLQAYFDNPQVQAYLD
EMPSREDPPAGMLSPSAPHRCREQAPHPPPHLPAVVGPEPTQELYRPPAPWQQGVPEPPRLSDLPSYRSTPKAGVSALAD
ESSSAPHRCRERAQDRSPQGDGVQGLRSAGAIGLQDVERYRRSRLGSRKRPALPAVGFAPLTRVAGVVGVGILSLLVIWQ
MLRGLFTPPPAPPLEQPQVQIEQPPVDISLRDASANDNPGQTEPAPPPELTGPLAEWQGVQQVRVVSNDGLNIRQQPSLT
GAIVGTAPRQALLRVVEVQAGEGQVPVWLRIERDGAPGGWVAAQSGSTRLVERL

Sequences:

>Translated_694_residues
MRVPLDYYRVLMLSARADEHQIEQAYRERIDLKPGERSWLSGFSPQAVEARAQMIQEAASVLLNPEARRNYDEHLMPTDP
TLTVEEAHLPGVLCLYCEAGEYQAALDLAQHLLEQGHPARSDAILARAIARLELGREAWQQGSYEEAARSLQAGLAELEE
YQAFPQMQAEIRIDLGKLRPYRILQLLSHEAHAPAPAGRETLVLRTADANGERQQGLALLKAMLDERGGIEGMGQDGSGL
STEDFLRFIQRVRRHLTLKEQQELFEREAERPSMVAAYLAVQVLLAAGYLENRPALVRRARGYLARLAQRQDVHLEQAIC
SLLLGQTEDALAHLRSTQEVEALQFIEEHSAGSPDHLPGLCRFTEKWFQEEVFPEFRGLEAAQVTLQAYFDNPQVQAYLD
EMPSREDPPAGMLSPSAPHRCREQAPHPPPHLPAVVGPEPTQELYRPPAPWQQGVPEPPRLSDLPSYRSTPKAGVSALAD
ESSSAPHRCRERAQDRSPQGDGVQGLRSAGAIGLQDVERYRRSRLGSRKRPALPAVGFAPLTRVAGVVGVGILSLLVIWQ
MLRGLFTPPPAPPLEQPQVQIEQPPVDISLRDASANDNPGQTEPAPPPELTGPLAEWQGVQQVRVVSNDGLNIRQQPSLT
GAIVGTAPRQALLRVVEVQAGEGQVPVWLRIERDGAPGGWVAAQSGSTRLVERL
>Mature_694_residues
MRVPLDYYRVLMLSARADEHQIEQAYRERIDLKPGERSWLSGFSPQAVEARAQMIQEAASVLLNPEARRNYDEHLMPTDP
TLTVEEAHLPGVLCLYCEAGEYQAALDLAQHLLEQGHPARSDAILARAIARLELGREAWQQGSYEEAARSLQAGLAELEE
YQAFPQMQAEIRIDLGKLRPYRILQLLSHEAHAPAPAGRETLVLRTADANGERQQGLALLKAMLDERGGIEGMGQDGSGL
STEDFLRFIQRVRRHLTLKEQQELFEREAERPSMVAAYLAVQVLLAAGYLENRPALVRRARGYLARLAQRQDVHLEQAIC
SLLLGQTEDALAHLRSTQEVEALQFIEEHSAGSPDHLPGLCRFTEKWFQEEVFPEFRGLEAAQVTLQAYFDNPQVQAYLD
EMPSREDPPAGMLSPSAPHRCREQAPHPPPHLPAVVGPEPTQELYRPPAPWQQGVPEPPRLSDLPSYRSTPKAGVSALAD
ESSSAPHRCRERAQDRSPQGDGVQGLRSAGAIGLQDVERYRRSRLGSRKRPALPAVGFAPLTRVAGVVGVGILSLLVIWQ
MLRGLFTPPPAPPLEQPQVQIEQPPVDISLRDASANDNPGQTEPAPPPELTGPLAEWQGVQQVRVVSNDGLNIRQQPSLT
GAIVGTAPRQALLRVVEVQAGEGQVPVWLRIERDGAPGGWVAAQSGSTRLVERL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76642; Mature: 76642

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPLDYYRVLMLSARADEHQIEQAYRERIDLKPGERSWLSGFSPQAVEARAQMIQEAAS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
VLLNPEARRNYDEHLMPTDPTLTVEEAHLPGVLCLYCEAGEYQAALDLAQHLLEQGHPAR
HHCCCHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
SDAILARAIARLELGREAWQQGSYEEAARSLQAGLAELEEYQAFPQMQAEIRIDLGKLRP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCH
YRILQLLSHEAHAPAPAGRETLVLRTADANGERQQGLALLKAMLDERGGIEGMGQDGSGL
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
STEDFLRFIQRVRRHLTLKEQQELFEREAERPSMVAAYLAVQVLLAAGYLENRPALVRRA
CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RGYLARLAQRQDVHLEQAICSLLLGQTEDALAHLRSTQEVEALQFIEEHSAGSPDHLPGL
HHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
CRFTEKWFQEEVFPEFRGLEAAQVTLQAYFDNPQVQAYLDEMPSREDPPAGMLSPSAPHR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHH
CREQAPHPPPHLPAVVGPEPTQELYRPPAPWQQGVPEPPRLSDLPSYRSTPKAGVSALAD
HHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC
ESSSAPHRCRERAQDRSPQGDGVQGLRSAGAIGLQDVERYRRSRLGSRKRPALPAVGFAP
CCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
LTRVAGVVGVGILSLLVIWQMLRGLFTPPPAPPLEQPQVQIEQPPVDISLRDASANDNPG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC
QTEPAPPPELTGPLAEWQGVQQVRVVSNDGLNIRQQPSLTGAIVGTAPRQALLRVVEVQA
CCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCC
GEGQVPVWLRIERDGAPGGWVAAQSGSTRLVERL
CCCCCCEEEEEECCCCCCCEEEECCCCHHHHHCC
>Mature Secondary Structure
MRVPLDYYRVLMLSARADEHQIEQAYRERIDLKPGERSWLSGFSPQAVEARAQMIQEAAS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
VLLNPEARRNYDEHLMPTDPTLTVEEAHLPGVLCLYCEAGEYQAALDLAQHLLEQGHPAR
HHCCCHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
SDAILARAIARLELGREAWQQGSYEEAARSLQAGLAELEEYQAFPQMQAEIRIDLGKLRP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCH
YRILQLLSHEAHAPAPAGRETLVLRTADANGERQQGLALLKAMLDERGGIEGMGQDGSGL
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
STEDFLRFIQRVRRHLTLKEQQELFEREAERPSMVAAYLAVQVLLAAGYLENRPALVRRA
CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RGYLARLAQRQDVHLEQAICSLLLGQTEDALAHLRSTQEVEALQFIEEHSAGSPDHLPGL
HHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
CRFTEKWFQEEVFPEFRGLEAAQVTLQAYFDNPQVQAYLDEMPSREDPPAGMLSPSAPHR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHH
CREQAPHPPPHLPAVVGPEPTQELYRPPAPWQQGVPEPPRLSDLPSYRSTPKAGVSALAD
HHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC
ESSSAPHRCRERAQDRSPQGDGVQGLRSAGAIGLQDVERYRRSRLGSRKRPALPAVGFAP
CCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
LTRVAGVVGVGILSLLVIWQMLRGLFTPPPAPPLEQPQVQIEQPPVDISLRDASANDNPG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC
QTEPAPPPELTGPLAEWQGVQQVRVVSNDGLNIRQQPSLTGAIVGTAPRQALLRVVEVQA
CCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCC
GEGQVPVWLRIERDGAPGGWVAAQSGSTRLVERL
CCCCCCEEEEEECCCCCCCEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA