Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608924

Identifier: 86608924

GI number: 86608924

Start: 1533167

End: 1533661

Strand: Reverse

Name: 86608924

Synonym: CYB_1456

Alternate gene names: NA

Gene position: 1533661-1533167 (Counterclockwise)

Preceding gene: 86608925

Following gene: 86608923

Centisome position: 50.34

GC content: 59.19

Gene sequence:

>495_bases
ATGTCTCCCCAACCGATTTCTCCCCATCCAGGACAAGAATCTGTCTGGGACTATCCGCGCCCACCTCGTCTGGAGCCCAC
CACAGAACTGGTGGAAGTTCTCTTCAATGGCGAGCTCATTGCCCAAAGCCGCCGTTGCTACCGCGTCCTGGAAACCAGCC
ACCCGCCCACCTACTACATTCCCCCCACCGACGTTCGACTGCAGTATCTCCGCCCCAGCTCTCGCACCTCTTTCTGTGAG
TTCAAAGGGGCTGCCTGCTACTGGACAGTTCAGGTCGGATCCCAAACAGCCGTAGATGCCGCCTGGAGCTATCCGGATCC
CAGCCCGGCGTTTTTGCCCATCCGCGACTACCTTGCCTTTTATCCAGGCCGTGTGCAGGAGTGCCGGGTAGGTGGAGAAC
GAGTCCGGCCTCAACCCGGAGATTTCTACGGCGGTTGGATCACCTCAAAGGTCGTAGGCCCTTTCAAAGGAGAGCCGGGT
AGCTGGAACTGGTAG

Upstream 100 bases:

>100_bases
GTTATTCAGCCGCTGCCGGAGCAACAGTCTTTGCTGCTGATCCAGTACGCCAAACTGCTGGAGGCCACCCGTCTGCTTTA
GATATTGAAGATATTGACCC

Downstream 100 bases:

>100_bases
GGGCGGAGCAGCGATTCCCGAGGGGGGATCCCTTTTACCCACGAAAAGGACTACAGTTAAGTCGATGCGGGTAAGTTGTC
CAAGGACTCCGTCCCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSPQPISPHPGQESVWDYPRPPRLEPTTELVEVLFNGELIAQSRRCYRVLETSHPPTYYIPPTDVRLQYLRPSSRTSFCE
FKGAACYWTVQVGSQTAVDAAWSYPDPSPAFLPIRDYLAFYPGRVQECRVGGERVRPQPGDFYGGWITSKVVGPFKGEPG
SWNW

Sequences:

>Translated_164_residues
MSPQPISPHPGQESVWDYPRPPRLEPTTELVEVLFNGELIAQSRRCYRVLETSHPPTYYIPPTDVRLQYLRPSSRTSFCE
FKGAACYWTVQVGSQTAVDAAWSYPDPSPAFLPIRDYLAFYPGRVQECRVGGERVRPQPGDFYGGWITSKVVGPFKGEPG
SWNW
>Mature_163_residues
SPQPISPHPGQESVWDYPRPPRLEPTTELVEVLFNGELIAQSRRCYRVLETSHPPTYYIPPTDVRLQYLRPSSRTSFCEF
KGAACYWTVQVGSQTAVDAAWSYPDPSPAFLPIRDYLAFYPGRVQECRVGGERVRPQPGDFYGGWITSKVVGPFKGEPGS
WNW

Specific function: Unknown

COG id: COG2343

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18627; Mature: 18496

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQPISPHPGQESVWDYPRPPRLEPTTELVEVLFNGELIAQSRRCYRVLETSHPPTYYI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCEEEE
PPTDVRLQYLRPSSRTSFCEFKGAACYWTVQVGSQTAVDAAWSYPDPSPAFLPIRDYLAF
CCCCCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCEEECCCCCCCCEEEHHHHHHH
YPGRVQECRVGGERVRPQPGDFYGGWITSKVVGPFKGEPGSWNW
CCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPQPISPHPGQESVWDYPRPPRLEPTTELVEVLFNGELIAQSRRCYRVLETSHPPTYYI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCEEEE
PPTDVRLQYLRPSSRTSFCEFKGAACYWTVQVGSQTAVDAAWSYPDPSPAFLPIRDYLAF
CCCCCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCEEECCCCCCCCEEEHHHHHHH
YPGRVQECRVGGERVRPQPGDFYGGWITSKVVGPFKGEPGSWNW
CCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA