| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yugF [H]
Identifier: 86608917
GI number: 86608917
Start: 1520351
End: 1521286
Strand: Reverse
Name: yugF [H]
Synonym: CYB_1449
Alternate gene names: 86608917
Gene position: 1521286-1520351 (Counterclockwise)
Preceding gene: 86608918
Following gene: 86608915
Centisome position: 49.93
GC content: 61.43
Gene sequence:
>936_bases TTGCCATGCAGCGCCAACGCGAACACAGAGCATCGCTGGCTCTGGCGTGACCAGCCCATTCGCTACCAACAGTCGGGATC CACAGGCCCAGCCGTGTTGCTCATCCATGGCTTTGGGGCCAGCAGCGACCATTGGCGGAAAAATTTGCCGGAGCTGGGGC AGCACTGTCAGGTGTATGCGGTCGATTTGTTGGGGTTTGGGGGATCCGCCAAGCCCCTGCCGGGATCCCCTTTGCCCTAC ACCTTTGAGACCTGGGGATCCCTGGTGGCAGACTTTGTCCGAGAGGTGGTGGGCCAGCCAGTCTATCTGGTGGGCAACTC GATTGGCTGCATTGTGGCTTTGCAGGCGGCGGTTCTGGATCCGGCCCAGGTTTTAGGGGTAGCGATGTTGGATCCCTCGC TGCGGCTGTTGCACGAGCGGAAACGGGGCCAGGTCTCCTGGCTGCGCCGCCGGTTCACCCCTTTGCTGCAATCCCTGCTG GGGTGGCCCCCCTTTGGTCGTTTCTTCTTTGCTCAGGTGGCCCAGGCTAGGGCCATTCGCAATATCCTCCTCCAAGCCTA CGGGCGCAAAGAAGCGGTTACCGAGGAGCTGATCCAGCTTTTGCTCAAACCCGCTTTGGAGCCGGGGGCGGCAGAGGTCT TTTTGGCCTTTGTGCGCTATTCTCAGGGGCCTTTGGCTGAAGATCTCTTGCCTCAGCTCACCTGTCCCGTCTTGATCTTG TGGGGGGAAGCGGATCCCTGGGAACCCATTGCTCTGGGGCGGGCCCTGGCAGAGTTTCCTTGCGTGGTGGGGTTCATCCC ATTGCCGGGGGTCGGCCATTGCCCCCAGGATGAAGCCCCCGAGCTGGTCAACCCGCTGCTGTTGGACTGGATCCGGGATC CCACCCGAAAACCTGAGAAAGGACTCCATTCTCTCCCCCCAGAAGAGGGGAGCTAG
Upstream 100 bases:
>100_bases GAGCCGGGTAGTTTACTTGCCCCGATCACAAGAACTTTGTCCCGCTGTCGCGAACGGTTAGGATCGCAACGCTGACTCAA ACCTACACTGCACCCCCATG
Downstream 100 bases:
>100_bases GAAGCGGCGCAGCAAGAGCTTCCCTGGGCTCAAGGATGGCGCGGGCTGCCCTTGGAATTCTCATAATCTACGCCCGACCA AGGTGCTCCAGTTGATCCAG
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYAVDLLGFGGSAKPLPGSPLPY TFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLL GWPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEKGLHSLPPEEGS
Sequences:
>Translated_311_residues MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYAVDLLGFGGSAKPLPGSPLPY TFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLL GWPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEKGLHSLPPEEGS >Mature_310_residues PCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYAVDLLGFGGSAKPLPGSPLPYT FETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLLG WPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLILW GEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEKGLHSLPPEEGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 34261; Mature: 34130
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYA CCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCHHHHHCCCEEEE VDLLGFGGSAKPLPGSPLPYTFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLD EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCC PAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLLGWPPFGRFFFAQVAQARAIR HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH NILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEE WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEK ECCCCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH GLHSLPPEEGS HHHCCCCCCCC >Mature Secondary Structure PCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYA CCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCHHHHHCCCEEEE VDLLGFGGSAKPLPGSPLPYTFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLD EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCC PAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLLGWPPFGRFFFAQVAQARAIR HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH NILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEE WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEK ECCCCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH GLHSLPPEEGS HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]