| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608915
Identifier: 86608915
GI number: 86608915
Start: 1519383
End: 1519604
Strand: Reverse
Name: 86608915
Synonym: CYB_1447
Alternate gene names: NA
Gene position: 1519604-1519383 (Counterclockwise)
Preceding gene: 86608917
Following gene: 86608911
Centisome position: 49.88
GC content: 57.21
Gene sequence:
>222_bases ATGACCCGATATCGCTCCGTCGTCGTCGAAGAAGGCGGTCGGCTGAACAACTACGCCATTGAGCCAGAAATGTATGTGGA TAGCACCCCCCGCGTGGGCTTCACCGACTATGCAGAGCGCTTGAACGGGCGCTTGGCAATGATCGGCTTTGTTGCCCTGA TCCTGTTTGAAGCTCTGTCTGGTACCACCCTGATTGGCTGGCTGCAGTCCCTGGGCCGATAA
Upstream 100 bases:
>100_bases GCCCGGCAGCTCGGAGCGTTGGGCATTAACGTTGTAAATAAAACTTTACAATCCTACGCAAAGCGAGCTACGCTGGGAAA GAAAGCACGAGGAGAACCCT
Downstream 100 bases:
>100_bases GCCAAAGAACGCTTCCTAGGAAGAGGGCTGTCTCTAATCGCCGATTGACTGTTCGCGATAGTGGGACGGAGTCCTCACTT TGTTGCACAATTCTCTACAA
Product: CAB/ELIP/HLIP family protein
Products: NA
Alternate protein names: CAB/ELIP/HLIP Superfamily Protein; CAB/ELIP/HLIP Family Protein; High Light-Inducible Protein
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTRYRSVVVEEGGRLNNYAIEPEMYVDSTPRVGFTDYAERLNGRLAMIGFVALILFEALSGTTLIGWLQSLGR
Sequences:
>Translated_73_residues MTRYRSVVVEEGGRLNNYAIEPEMYVDSTPRVGFTDYAERLNGRLAMIGFVALILFEALSGTTLIGWLQSLGR >Mature_72_residues TRYRSVVVEEGGRLNNYAIEPEMYVDSTPRVGFTDYAERLNGRLAMIGFVALILFEALSGTTLIGWLQSLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8187; Mature: 8055
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYRSVVVEEGGRLNNYAIEPEMYVDSTPRVGFTDYAERLNGRLAMIGFVALILFEALS CCCCHHHHCCCCCCCCCEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC GTTLIGWLQSLGR CCHHHHHHHHHCC >Mature Secondary Structure TRYRSVVVEEGGRLNNYAIEPEMYVDSTPRVGFTDYAERLNGRLAMIGFVALILFEALS CCCHHHHCCCCCCCCCEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC GTTLIGWLQSLGR CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA