| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is accC [H]
Identifier: 86608860
GI number: 86608860
Start: 1462919
End: 1464274
Strand: Direct
Name: accC [H]
Synonym: CYB_1391
Alternate gene names: 86608860
Gene position: 1462919-1464274 (Clockwise)
Preceding gene: 86608859
Following gene: 86608861
Centisome position: 48.02
GC content: 61.65
Gene sequence:
>1356_bases ATGCCGCCCATCACCAAGATCCTGATCGCCAACCGGGGTGAGATTGCCCTGCGCATCATCCGCACCTGTCAGGAAATGGG GATCCGAACGGTGGCCGTTTACTCCACTGCGGATCAGAACTCCCTGCACGTCCAACTGGCGGACGAGGCTGTTTGCGTAG GAGATGCCCCGGTGGCCAAAAGCTACCTCAACATTCCCAACATCATCTCGGCAGCCCTCACCCGCGGGGCCACTGCCATT CATCCGGGCTATGGGTTCTTGGCGGAGAATGCCAAATTTGCCGAGATGTGTGCCGACCACAACTTGATCTTCATCGGCCC CTCGCCAGAGGCGATGCGCAAGATGGGCGACAAGGCCACGGCCCGCGAGACCATGCAAGCGGTGGGGGTGCCGACGGTGC CGGGCAGCCGCGGGTTGATCACCTCTGAGGAGGAGGCAGTGAAGCTGGCGGAGAAAATCGGCTACCCCGTGATCATCAAA GCCACCGCCGGTGGCGGGGGGCGGGGTATGCGGGTGGCGCGGGATGCCCAGGAGCTGCTGAAGATGCTGCGCACCGCTCA GGGGGAAGCCCAAGCAGCCTTTGGCAACGGCGGGGTTTACTTGGAGAAGTTCATCGAGCGCCCCCGTCATGTGGAGTTTC AGATCTTGGCGGATAGCCAGGGCAATGTGGTGCATCTGTACGAGCGGGATTGCTCCATTCAACGGCGGCATCAAAAGCTG TTGGAAGAGGCCCCCAGCCCGGCTTTGACTGCAAGCTTGCGCGCCCGCATGGGAGCAGCGGCGGTGAAAGCGGCCAAGGT GGTGAATTACGTGGGAGCGGGCACGGTGGAGTTTTTGCTGGACAAAAATGGCCAGTTCTACTTCATCGAGATGAACACCC GCATCCAGGTGGAGCACCCGGTTACCGAGATGGTGACAGGGCTGGATCTGATTGCCGAGCAGATTCGCATTGCCCAAGGT CAACCCCTCACCTTTCGCCAGAAGGATGTGGAGTTGCGGGGCCATGCTATCGAATGCCGCATCAACGCCGAGGATCCCAA GCAGCAGTTTCGGCCTTGCGCTGGCACGATCAGCGCCTATTTGCCCCCTGGGGGGCCGGGGGTGCGCATGGATTCCCACA TCTACACCGACTACACCATTCCCCCCTACTACGATTCGCTGTTGGGCAAGCTGATCGTCTGGGGGCCTAACCGGGCGGCA GCCATCCGCCGCATGCAGCGGGCTTTGGGGGAATGTGCCATCACCGGGGTGCCCACCACGATCCCTTTCCACCAGCAGAT CCTGCGCCACGAGGCTTTTTTGCGGGGCGAGGTGTACACGGATTTCATCACCCAACACCTGCTGCCCGGCCAGTAG
Upstream 100 bases:
>100_bases CCTCTGGTTGGCATAGTAGGATGAGCACCTAAACTTAACCTTGCGTTCACAGACTGCTGGCTTTAGCGGTCAAGTTATCT CTCTGCTCTGAACCTCCCTC
Downstream 100 bases:
>100_bases CCATCGACTCTCAGGTCGGGATCCCTCTCTGGACAGCAGCTGGCCACAAGTTGAGGATAAAGTTAAGGGCTAGCAGAGGG ATGGAGGTGGCAGGATGAGG
Product: acetyl-CoA carboxylase biotin carboxylase subunit
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MPPITKILIANRGEIALRIIRTCQEMGIRTVAVYSTADQNSLHVQLADEAVCVGDAPVAKSYLNIPNIISAALTRGATAI HPGYGFLAENAKFAEMCADHNLIFIGPSPEAMRKMGDKATARETMQAVGVPTVPGSRGLITSEEEAVKLAEKIGYPVIIK ATAGGGGRGMRVARDAQELLKMLRTAQGEAQAAFGNGGVYLEKFIERPRHVEFQILADSQGNVVHLYERDCSIQRRHQKL LEEAPSPALTASLRARMGAAAVKAAKVVNYVGAGTVEFLLDKNGQFYFIEMNTRIQVEHPVTEMVTGLDLIAEQIRIAQG QPLTFRQKDVELRGHAIECRINAEDPKQQFRPCAGTISAYLPPGGPGVRMDSHIYTDYTIPPYYDSLLGKLIVWGPNRAA AIRRMQRALGECAITGVPTTIPFHQQILRHEAFLRGEVYTDFITQHLLPGQ
Sequences:
>Translated_451_residues MPPITKILIANRGEIALRIIRTCQEMGIRTVAVYSTADQNSLHVQLADEAVCVGDAPVAKSYLNIPNIISAALTRGATAI HPGYGFLAENAKFAEMCADHNLIFIGPSPEAMRKMGDKATARETMQAVGVPTVPGSRGLITSEEEAVKLAEKIGYPVIIK ATAGGGGRGMRVARDAQELLKMLRTAQGEAQAAFGNGGVYLEKFIERPRHVEFQILADSQGNVVHLYERDCSIQRRHQKL LEEAPSPALTASLRARMGAAAVKAAKVVNYVGAGTVEFLLDKNGQFYFIEMNTRIQVEHPVTEMVTGLDLIAEQIRIAQG QPLTFRQKDVELRGHAIECRINAEDPKQQFRPCAGTISAYLPPGGPGVRMDSHIYTDYTIPPYYDSLLGKLIVWGPNRAA AIRRMQRALGECAITGVPTTIPFHQQILRHEAFLRGEVYTDFITQHLLPGQ >Mature_450_residues PPITKILIANRGEIALRIIRTCQEMGIRTVAVYSTADQNSLHVQLADEAVCVGDAPVAKSYLNIPNIISAALTRGATAIH PGYGFLAENAKFAEMCADHNLIFIGPSPEAMRKMGDKATARETMQAVGVPTVPGSRGLITSEEEAVKLAEKIGYPVIIKA TAGGGGRGMRVARDAQELLKMLRTAQGEAQAAFGNGGVYLEKFIERPRHVEFQILADSQGNVVHLYERDCSIQRRHQKLL EEAPSPALTASLRARMGAAAVKAAKVVNYVGAGTVEFLLDKNGQFYFIEMNTRIQVEHPVTEMVTGLDLIAEQIRIAQGQ PLTFRQKDVELRGHAIECRINAEDPKQQFRPCAGTISAYLPPGGPGVRMDSHIYTDYTIPPYYDSLLGKLIVWGPNRAAA IRRMQRALGECAITGVPTTIPFHQQILRHEAFLRGEVYTDFITQHLLPGQ
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=444, Percent_Identity=49.7747747747748, Blast_Score=470, Evalue=1e-132, Organism=Homo sapiens, GI189095269, Length=447, Percent_Identity=49.4407158836689, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI65506442, Length=442, Percent_Identity=50, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI295821183, Length=442, Percent_Identity=50, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI106049528, Length=450, Percent_Identity=50.4444444444444, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI106049295, Length=450, Percent_Identity=50.4444444444444, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI106049292, Length=450, Percent_Identity=50.4444444444444, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI38679960, Length=507, Percent_Identity=32.9388560157791, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI38679977, Length=507, Percent_Identity=32.9388560157791, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI38679967, Length=507, Percent_Identity=32.9388560157791, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI38679974, Length=507, Percent_Identity=32.9388560157791, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI38679971, Length=507, Percent_Identity=32.9388560157791, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI134142062, Length=508, Percent_Identity=33.2677165354331, Blast_Score=275, Evalue=6e-74, Organism=Escherichia coli, GI1789654, Length=445, Percent_Identity=57.5280898876405, Blast_Score=496, Evalue=1e-141, Organism=Caenorhabditis elegans, GI71987519, Length=445, Percent_Identity=49.438202247191, Blast_Score=447, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17567343, Length=444, Percent_Identity=49.0990990990991, Blast_Score=419, Evalue=1e-117, Organism=Caenorhabditis elegans, GI17562816, Length=448, Percent_Identity=47.7678571428571, Blast_Score=411, Evalue=1e-115, Organism=Caenorhabditis elegans, GI71997163, Length=511, Percent_Identity=29.9412915851272, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI71997168, Length=511, Percent_Identity=29.9412915851272, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI133931226, Length=489, Percent_Identity=29.038854805726, Blast_Score=216, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6319695, Length=447, Percent_Identity=46.3087248322148, Blast_Score=377, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6319685, Length=441, Percent_Identity=44.2176870748299, Blast_Score=375, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=47.427293064877, Blast_Score=366, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6324343, Length=522, Percent_Identity=32.183908045977, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6323863, Length=485, Percent_Identity=31.9587628865979, Blast_Score=238, Evalue=1e-63, Organism=Drosophila melanogaster, GI24651757, Length=448, Percent_Identity=49.1071428571429, Blast_Score=449, Evalue=1e-126, Organism=Drosophila melanogaster, GI24652212, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24652210, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24652214, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI19921944, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24652216, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI281363050, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24652224, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24652222, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24652220, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24652218, Length=449, Percent_Identity=50.3340757238307, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24651759, Length=409, Percent_Identity=47.6772616136919, Blast_Score=396, Evalue=1e-110, Organism=Drosophila melanogaster, GI161076407, Length=502, Percent_Identity=32.8685258964143, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24586460, Length=502, Percent_Identity=32.8685258964143, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI161076409, Length=502, Percent_Identity=32.8685258964143, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24586458, Length=502, Percent_Identity=32.8685258964143, Blast_Score=266, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 49348; Mature: 49216
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPITKILIANRGEIALRIIRTCQEMGIRTVAVYSTADQNSLHVQLADEAVCVGDAPVAK CCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCEEEECCCHHHH SYLNIPNIISAALTRGATAIHPGYGFLAENAKFAEMCADHNLIFIGPSPEAMRKMGDKAT HHCCCHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHCCCCEEEECCCHHHHHHCCCHHH ARETMQAVGVPTVPGSRGLITSEEEAVKLAEKIGYPVIIKATAGGGGRGMRVARDAQELL HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH KMLRTAQGEAQAAFGNGGVYLEKFIERPRHVEFQILADSQGNVVHLYERDCSIQRRHQKL HHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHH LEEAPSPALTASLRARMGAAAVKAAKVVNYVGAGTVEFLLDKNGQFYFIEMNTRIQVEHP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEECCC VTEMVTGLDLIAEQIRIAQGQPLTFRQKDVELRGHAIECRINAEDPKQQFRPCAGTISAY HHHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCEEEEEEECCCCCHHHHCCCCCCCEEE LPPGGPGVRMDSHIYTDYTIPPYYDSLLGKLIVWGPNRAAAIRRMQRALGECAITGVPTT CCCCCCCCEECCEEEECCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHEEECCCCCC IPFHQQILRHEAFLRGEVYTDFITQHLLPGQ CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure PPITKILIANRGEIALRIIRTCQEMGIRTVAVYSTADQNSLHVQLADEAVCVGDAPVAK CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCEEEECCCHHHH SYLNIPNIISAALTRGATAIHPGYGFLAENAKFAEMCADHNLIFIGPSPEAMRKMGDKAT HHCCCHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHCCCCEEEECCCHHHHHHCCCHHH ARETMQAVGVPTVPGSRGLITSEEEAVKLAEKIGYPVIIKATAGGGGRGMRVARDAQELL HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH KMLRTAQGEAQAAFGNGGVYLEKFIERPRHVEFQILADSQGNVVHLYERDCSIQRRHQKL HHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHH LEEAPSPALTASLRARMGAAAVKAAKVVNYVGAGTVEFLLDKNGQFYFIEMNTRIQVEHP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEECCC VTEMVTGLDLIAEQIRIAQGQPLTFRQKDVELRGHAIECRINAEDPKQQFRPCAGTISAY HHHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCEEEEEEECCCCCHHHHCCCCCCCEEE LPPGGPGVRMDSHIYTDYTIPPYYDSLLGKLIVWGPNRAAAIRRMQRALGECAITGVPTT CCCCCCCCEECCEEEECCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHEEECCCCCC IPFHQQILRHEAFLRGEVYTDFITQHLLPGQ CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8102363; 11759840 [H]