Click here to switch to the map view.

The map label for this gene is yliI [C]

Identifier: 86608848

GI number: 86608848

Start: 1442816

End: 1443910

Strand: Reverse

Name: yliI [C]

Synonym: CYB_1374

Alternate gene names: 86608848

Gene position: 1443910-1442816 (Counterclockwise)

Preceding gene: 86608850

Following gene: 86608846

Centisome position: 47.39

GC content: 63.11

Gene sequence:

>1095_bases
ATGGTGATGACCCTGCAACAGGGGGATCATGCCCAAGCCTTGCCCAGGGCCAGAACGGAGCAAGCGTTTCGGGTGGTTAC
TTTGGCCCAGGGTTTGGAGCACCCTTGGGGGATGGCCTTTTTGCCGGATGGAACTCTCTTGGTTACCGAACGCCCAGGGC
GGCTGCGCCGAGTTACCCCCCAGGGATTGGATCCCCAGCCCATAGCCGGTGTGCCCGAGGTGTTTGCCCAGGGGCAGGGG
GGCCTGCTGGACATCGCCTTGCACCCCAACCATGCAGAGAACGGCTGGATTTACCTGTCCTATGCCGCTCCTGGGCCCGG
TGGGGGAGGCACGCGGGTGGCGCGAGCCCGTCTGGGGGAAGGGGGCCTACAGGATCTGGAAGTGATTTTTGATATGGAGC
GCAAAACCCCTGCCCGGCAGCACTTTGGCTCCCGTTTGGTCTTTGACGAAGAAGGATTCCTCTACATCAGCACCGGAGAC
CGGGGAGAACGGGATCGAGCCCAAGATTTGGGGGATTCTGCCGGTAAAGTGTTGCGCATTACGGATGCGGGCGGGATCCC
GGCGGACAACCCATTTGTCGGCCGAGCGGGGGCTTTGCCGGCAATTTTTACCTACGGCAACCGCAACATTCAGGGAATAG
CCCGCCACCCCGAGACGGGAGCGATTTGGTCCCACGAGCATGGGCCCCAGGGTGGAGACGAGATCAACATCTTGGCCCCC
GGCGTCAACTACGGCTGGCCCTTGATCACCCACGGTCGAGAATATACGGGGGAACCTATCGGCCAAGGACTGGCGGCAGC
TCCTGGATTGGCTTCGCCCCTGCTGCACTGGACACCCTCAATTGCCCCTTCCGGCATGACTTTCTACACAGGGGAGGCTT
TCCCCGAATGGCGGGGCAACCTATTTGTGGGGGCGCTGGCCGGGCAACACCTGGCGCGCTTGGTACTGGATGGAGAGCGG
GTGGTGGCGGAAGAGCGCCTGCTGGAAGGGGCGGTGGGTCGCATTCGCGATGTGCGGCAGGGGCCGGATGGCTTGCTCTA
CCTGTTGACCGATGCCCCCAGTGGATCCCTGCTGCGCCTGGAGCCAGCACCCTGA

Upstream 100 bases:

>100_bases
GGCCATGAGGATCCCGGCGATCAAGCTTCTCTCCTCACTGCTGCTTTTTGGGGGGGTGTCCGTCCCCGCTGTCGTGGCGG
CCTACCCGGTCAGCCCGGAG

Downstream 100 bases:

>100_bases
AGGCACCGGCTTAGGAGATGACGGAAACTATCCTGCTCCCGCTGGGCAGCTCTTTGGCGGGACAGGGACTTTCCCCAGAG
TAGGGCCTGGGAACTCAAAA

Product: glucose/sorbosone dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MVMTLQQGDHAQALPRARTEQAFRVVTLAQGLEHPWGMAFLPDGTLLVTERPGRLRRVTPQGLDPQPIAGVPEVFAQGQG
GLLDIALHPNHAENGWIYLSYAAPGPGGGGTRVARARLGEGGLQDLEVIFDMERKTPARQHFGSRLVFDEEGFLYISTGD
RGERDRAQDLGDSAGKVLRITDAGGIPADNPFVGRAGALPAIFTYGNRNIQGIARHPETGAIWSHEHGPQGGDEINILAP
GVNYGWPLITHGREYTGEPIGQGLAAAPGLASPLLHWTPSIAPSGMTFYTGEAFPEWRGNLFVGALAGQHLARLVLDGER
VVAEERLLEGAVGRIRDVRQGPDGLLYLLTDAPSGSLLRLEPAP

Sequences:

>Translated_364_residues
MVMTLQQGDHAQALPRARTEQAFRVVTLAQGLEHPWGMAFLPDGTLLVTERPGRLRRVTPQGLDPQPIAGVPEVFAQGQG
GLLDIALHPNHAENGWIYLSYAAPGPGGGGTRVARARLGEGGLQDLEVIFDMERKTPARQHFGSRLVFDEEGFLYISTGD
RGERDRAQDLGDSAGKVLRITDAGGIPADNPFVGRAGALPAIFTYGNRNIQGIARHPETGAIWSHEHGPQGGDEINILAP
GVNYGWPLITHGREYTGEPIGQGLAAAPGLASPLLHWTPSIAPSGMTFYTGEAFPEWRGNLFVGALAGQHLARLVLDGER
VVAEERLLEGAVGRIRDVRQGPDGLLYLLTDAPSGSLLRLEPAP
>Mature_364_residues
MVMTLQQGDHAQALPRARTEQAFRVVTLAQGLEHPWGMAFLPDGTLLVTERPGRLRRVTPQGLDPQPIAGVPEVFAQGQG
GLLDIALHPNHAENGWIYLSYAAPGPGGGGTRVARARLGEGGLQDLEVIFDMERKTPARQHFGSRLVFDEEGFLYISTGD
RGERDRAQDLGDSAGKVLRITDAGGIPADNPFVGRAGALPAIFTYGNRNIQGIARHPETGAIWSHEHGPQGGDEINILAP
GVNYGWPLITHGREYTGEPIGQGLAAAPGLASPLLHWTPSIAPSGMTFYTGEAFPEWRGNLFVGALAGQHLARLVLDGER
VVAEERLLEGAVGRIRDVRQGPDGLLYLLTDAPSGSLLRLEPAP

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI124248546, Length=255, Percent_Identity=31.3725490196078, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI187936953, Length=323, Percent_Identity=27.8637770897833, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI187936955, Length=323, Percent_Identity=27.8637770897833, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI20143973, Length=244, Percent_Identity=27.0491803278689, Blast_Score=82, Evalue=9e-16,
Organism=Escherichia coli, GI1787060, Length=344, Percent_Identity=44.7674418604651, Blast_Score=287, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 38969; Mature: 38969

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMTLQQGDHAQALPRARTEQAFRVVTLAQGLEHPWGMAFLPDGTLLVTERPGRLRRVTP
CEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCEEECCC
QGLDPQPIAGVPEVFAQGQGGLLDIALHPNHAENGWIYLSYAAPGPGGGGTRVARARLGE
CCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCC
GGLQDLEVIFDMERKTPARQHFGSRLVFDEEGFLYISTGDRGERDRAQDLGDSAGKVLRI
CCHHHHHHEEECCCCCCHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCCCCCCEEEE
TDAGGIPADNPFVGRAGALPAIFTYGNRNIQGIARHPETGAIWSHEHGPQGGDEINILAP
ECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
GVNYGWPLITHGREYTGEPIGQGLAAAPGLASPLLHWTPSIAPSGMTFYTGEAFPEWRGN
CCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCC
LFVGALAGQHLARLVLDGERVVAEERLLEGAVGRIRDVRQGPDGLLYLLTDAPSGSLLRL
EEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEE
EPAP
CCCC
>Mature Secondary Structure
MVMTLQQGDHAQALPRARTEQAFRVVTLAQGLEHPWGMAFLPDGTLLVTERPGRLRRVTP
CEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCEEECCC
QGLDPQPIAGVPEVFAQGQGGLLDIALHPNHAENGWIYLSYAAPGPGGGGTRVARARLGE
CCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCC
GGLQDLEVIFDMERKTPARQHFGSRLVFDEEGFLYISTGDRGERDRAQDLGDSAGKVLRI
CCHHHHHHEEECCCCCCHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCCCCCCEEEE
TDAGGIPADNPFVGRAGALPAIFTYGNRNIQGIARHPETGAIWSHEHGPQGGDEINILAP
ECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
GVNYGWPLITHGREYTGEPIGQGLAAAPGLASPLLHWTPSIAPSGMTFYTGEAFPEWRGN
CCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCC
LFVGALAGQHLARLVLDGERVVAEERLLEGAVGRIRDVRQGPDGLLYLLTDAPSGSLLRL
EEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEE
EPAP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]