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The map label for this gene is psbN

Identifier: 86608846

GI number: 86608846

Start: 1442184

End: 1442315

Strand: Reverse

Name: psbN

Synonym: CYB_1372

Alternate gene names: 86608846

Gene position: 1442315-1442184 (Counterclockwise)

Preceding gene: 86608848

Following gene: 86608845

Centisome position: 47.34

GC content: 54.55

Gene sequence:

>132_bases
ATGGAGCCCACCTTTTCCCTGATTGTGGCGATTGCGGCAGTTACCATCTGCATCACTGCGTTTGCCATCTACACGGCCTT
TGGCCCCCCTTCCAAGGACTTGCAGGATCCCTACGAGATGCACGAGGATTAA

Upstream 100 bases:

>100_bases
TCACGCTATCAGAATCTGGCCGAACCTTTTTGTCTTGGGCAATGAATTGTAAACTTGTGTAATACTGTAGTCGAATACTC
TCAGGATCAAAGACAACGAT

Downstream 100 bases:

>100_bases
GGCCTGTCGTTGGGATATCTGGGTAAATGTCTGCTCGGTTGACCCCCCGTCTCTCCTTTCACAAGTACCAGGGGTTGGGG
AACGATTTTATCTTGGTGGA

Product: photosystem II reaction center protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 43

Protein sequence:

>43_residues
MEPTFSLIVAIAAVTICITAFAIYTAFGPPSKDLQDPYEMHED

Sequences:

>Translated_43_residues
MEPTFSLIVAIAAVTICITAFAIYTAFGPPSKDLQDPYEMHED
>Mature_43_residues
MEPTFSLIVAIAAVTICITAFAIYTAFGPPSKDLQDPYEMHED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBN_SYNJB (Q2JLQ9)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_477608.1
- STRING:   Q2JLQ9
- GeneID:   3901239
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_1372
- TIGR:   CYB_1372
- HOGENOM:   HBG710424
- ProtClustDB:   PRK13183
- BioCyc:   SSP321332:CYB_1372-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00293
- InterPro:   IPR003398
- ProDom:   PD005510

Pfam domain/function: PF02468 PsbN

EC number: NA

Molecular weight: Translated: 4718; Mature: 4718

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x133285f0)-;

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPTFSLIVAIAAVTICITAFAIYTAFGPPSKDLQDPYEMHED
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCH
>Mature Secondary Structure
MEPTFSLIVAIAAVTICITAFAIYTAFGPPSKDLQDPYEMHED
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA