| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608826
Identifier: 86608826
GI number: 86608826
Start: 1421296
End: 1421493
Strand: Reverse
Name: 86608826
Synonym: CYB_1352
Alternate gene names: NA
Gene position: 1421493-1421296 (Counterclockwise)
Preceding gene: 86608829
Following gene: 86608825
Centisome position: 46.66
GC content: 58.08
Gene sequence:
>198_bases ATGGGGCACCTGCACCACCAAATCCATGTTCAAGCTACCCACCACTCGGATCGGGCCTGCCATCGGGCTTGTGGGGAAAT CCTGTTGGAAAAGCAGAGATCCAGAGATCTTTGGTTTGGATCCCTGGGCAGCTATTGTATCAGCCGCCGGTCTTGGCCAG GGATCCCCTTGAGCGCCCTACCACGCGACAAGGGCTGA
Upstream 100 bases:
>100_bases GGGCTCCCGCCCGCGCCGCTGCCACCGCTTGATTGGCTCCCTTACCGCCAGGGTAGGTGGCGTAGTCGGATCCCAGCACC GTTTCCCCAGGGCCGGGATG
Downstream 100 bases:
>100_bases TAGCAGTCGTGGTTTTTATTACCATCTATTTCAACTTTTATTACCATCTATTTCAACTGATCGCGCTAGCGGGCCGGAGG CCTTAGCAGGAAGCAACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MGHLHHQIHVQATHHSDRACHRACGEILLEKQRSRDLWFGSLGSYCISRRSWPGIPLSALPRDKG
Sequences:
>Translated_65_residues MGHLHHQIHVQATHHSDRACHRACGEILLEKQRSRDLWFGSLGSYCISRRSWPGIPLSALPRDKG >Mature_64_residues GHLHHQIHVQATHHSDRACHRACGEILLEKQRSRDLWFGSLGSYCISRRSWPGIPLSALPRDKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7412; Mature: 7280
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHLHHQIHVQATHHSDRACHRACGEILLEKQRSRDLWFGSLGSYCISRRSWPGIPLSAL CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC PRDKG CCCCC >Mature Secondary Structure GHLHHQIHVQATHHSDRACHRACGEILLEKQRSRDLWFGSLGSYCISRRSWPGIPLSAL CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC PRDKG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA