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The map label for this gene is hdrB2 [H]

Identifier: 86608822

GI number: 86608822

Start: 1417613

End: 1418506

Strand: Reverse

Name: hdrB2 [H]

Synonym: CYB_1348

Alternate gene names: 86608822

Gene position: 1418506-1417613 (Counterclockwise)

Preceding gene: 86608825

Following gene: 86608821

Centisome position: 46.56

GC content: 60.29

Gene sequence:

>894_bases
TTGCGCTACGCCTACTACCCCGGCTGTGTGGCCCAGGGGGCCTGTCGTGAGCTGTATGACTCCACCGACCAGATTGCGCG
GCATCTGGGCATTGAACTGGTGGAGCTGGAAGCCGCTTCCTGCTGTGGTTCGGGCACCTTCAAAGAAGAATCGGAGCTGC
TGGAAGATACGGTGAATGCCCGCAACCTGGCTTTGGCGGAAGCGCTGGGGTTGCCGATGCTCACCCACTGCAGCACCTGT
CAGGGGGTGTTGGGCCGCGTGAATGAAAAGTTAAAAGCTGCGAAAACCGCGAATCCAGAGTACTTTCACCAGGTGCAGGC
CCTGTGCCAGAAAGGAGGCTGCGAGAGCTGCTACCAGGGCACAGGCGATGTGCGCCATTTGCTGTGGGTGCTGGCTCATG
ACTACGGCCTGGAGCGATTGGCCCAACAGGTCAAACGGCCTCTCCTGGGACTGCGCTGCGCTGCCTTCTACGGGTGTTAT
CTGTTGCGGGCCTACGACATCTCCCGCTTTGATGTGGCACGGGATCCCCGTTTGATGGAGGATCTCTTCGAGCGTTTGGG
GGCCACCCCTGTTTGGTATCGCGGGCGCACCCAGTGTTGCGGCTGGCCCATTTCCAGCTATGCCCCGCAGCAGTCTTTCT
CGATGGCAGGCCGGCATCTTCTGGAGGCCATAGAGGCGGGAGCGGATTGTTTGGTCACCCCCTGTCCCCTGTGTCACCTC
AACTTGGACTCTCGGCAGCCGGAGGTGGAAGAGGTGATCGGGCGCAAGCTGGGGATCCCGATCCTGCATTTGCCACAATT
GGTGGGCCTGGCCCTGGGGATCCCGGCGAAAAACTTGGGACTGAACCGCCATGTAGTACAGGTGGAAAGAGCCCTGCAAA
AAATAGGCCGCTAA

Upstream 100 bases:

>100_bases
GTGGGCAATGGATCCATGGATTGTTATTACCGTTGAGATCGCAAACCCAATTCTCTTCTTCTTCTCACGTCTTCTCATGA
CCGCGGTTGTTCCTTCACCT

Downstream 100 bases:

>100_bases
ATCCCACTTGATGGCTGGGGGATCCCTGGGCAAACATCAGGTCTGGGAAGGATGTGTTATTCTGCCCAGCAAGGTACCCG
TCCTTGTTCAAAAACCGCAA

Product: succinate/fumarate oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MRYAYYPGCVAQGACRELYDSTDQIARHLGIELVELEAASCCGSGTFKEESELLEDTVNARNLALAEALGLPMLTHCSTC
QGVLGRVNEKLKAAKTANPEYFHQVQALCQKGGCESCYQGTGDVRHLLWVLAHDYGLERLAQQVKRPLLGLRCAAFYGCY
LLRAYDISRFDVARDPRLMEDLFERLGATPVWYRGRTQCCGWPISSYAPQQSFSMAGRHLLEAIEAGADCLVTPCPLCHL
NLDSRQPEVEEVIGRKLGIPILHLPQLVGLALGIPAKNLGLNRHVVQVERALQKIGR

Sequences:

>Translated_297_residues
MRYAYYPGCVAQGACRELYDSTDQIARHLGIELVELEAASCCGSGTFKEESELLEDTVNARNLALAEALGLPMLTHCSTC
QGVLGRVNEKLKAAKTANPEYFHQVQALCQKGGCESCYQGTGDVRHLLWVLAHDYGLERLAQQVKRPLLGLRCAAFYGCY
LLRAYDISRFDVARDPRLMEDLFERLGATPVWYRGRTQCCGWPISSYAPQQSFSMAGRHLLEAIEAGADCLVTPCPLCHL
NLDSRQPEVEEVIGRKLGIPILHLPQLVGLALGIPAKNLGLNRHVVQVERALQKIGR
>Mature_297_residues
MRYAYYPGCVAQGACRELYDSTDQIARHLGIELVELEAASCCGSGTFKEESELLEDTVNARNLALAEALGLPMLTHCSTC
QGVLGRVNEKLKAAKTANPEYFHQVQALCQKGGCESCYQGTGDVRHLLWVLAHDYGLERLAQQVKRPLLGLRCAAFYGCY
LLRAYDISRFDVARDPRLMEDLFERLGATPVWYRGRTQCCGWPISSYAPQQSFSMAGRHLLEAIEAGADCLVTPCPLCHL
NLDSRQPEVEEVIGRKLGIPILHLPQLVGLALGIPAKNLGLNRHVVQVERALQKIGR

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 32872; Mature: 32872

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYAYYPGCVAQGACRELYDSTDQIARHLGIELVELEAASCCGSGTFKEESELLEDTVNA
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHH
RNLALAEALGLPMLTHCSTCQGVLGRVNEKLKAAKTANPEYFHQVQALCQKGGCESCYQG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCC
TGDVRHLLWVLAHDYGLERLAQQVKRPLLGLRCAAFYGCYLLRAYDISRFDVARDPRLME
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
DLFERLGATPVWYRGRTQCCGWPISSYAPQQSFSMAGRHLLEAIEAGADCLVTPCPLCHL
HHHHHHCCCCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCEEEC
NLDSRQPEVEEVIGRKLGIPILHLPQLVGLALGIPAKNLGLNRHVVQVERALQKIGR
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRYAYYPGCVAQGACRELYDSTDQIARHLGIELVELEAASCCGSGTFKEESELLEDTVNA
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHH
RNLALAEALGLPMLTHCSTCQGVLGRVNEKLKAAKTANPEYFHQVQALCQKGGCESCYQG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCC
TGDVRHLLWVLAHDYGLERLAQQVKRPLLGLRCAAFYGCYLLRAYDISRFDVARDPRLME
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
DLFERLGATPVWYRGRTQCCGWPISSYAPQQSFSMAGRHLLEAIEAGADCLVTPCPLCHL
HHHHHHCCCCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCEEEC
NLDSRQPEVEEVIGRKLGIPILHLPQLVGLALGIPAKNLGLNRHVVQVERALQKIGR
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]