| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608813
Identifier: 86608813
GI number: 86608813
Start: 1403997
End: 1405103
Strand: Direct
Name: 86608813
Synonym: CYB_1339
Alternate gene names: NA
Gene position: 1403997-1405103 (Clockwise)
Preceding gene: 86608812
Following gene: 86608814
Centisome position: 46.08
GC content: 57.45
Gene sequence:
>1107_bases GTGTCCAAGTTCCTTTTAATTGGTTCTACTGAGCCCTTCAGCGGTAAGTCGGCTGCCATCTTGGGTTTGGCCAAGCATCT GCAGCAGCAAGGGATAAAAGTCACCTATGGGAAGCCCATCGGTTCTTGCGAGCGGGAAGATTGCTCGCTGGAAGGGGCCG ATCCGGATATGCGCTTTGTGGCGGAGTCTCTGCGGCTGACGATGGATCAAATGCCGCCGATGCTGCTCCGGCTCAACGAA GAGGCTTTGCTGGCTCAAATGAAGCGAGCTCCCGGGGATCCAGCTCCAGAGTGCCCGGTTGCCCCTCTGTTGGAGTTTGT CCAGCGCTCCCCTGCCGATTTGGTGCTGCTGGAAGGCCCAGCCGATCTTTACGAGGGGGAATTGTTTGGCCTGTCGCTGG CCAAGATGGCCCAAGCCCTGGATGCTCCGGTACTGCTGATCAGTCGCTACCATTCCTCCTTGGCTGTTGATTCTCTTCTC TTTGTCCATCGTCAACTGGGATCCCGCTTGGCAGGCGTGCTGCTGAACGATGTGCCGCCCGACCAGGTGCAACCGGCAAA AACGATCATTCGGCCTTTTTTGGAGGGACACGGGATCCCGGTGCTGGGGATTTTGCCCTCCCATCGCATTTTGCGCAGCA TCAGCGTTGGGGAGTTGGTGCGGCAACTGGATGCCGAGGTGCTCTGCTGTCCGGACCGGATGGACTTGATGGTCGAAGAC ATCGCGGTGGGGGCGATGAACGTCAACTCGGCCTTGAAGTACTTCCGTAAGCTGGATCACAAGGCGGTGATCACCGGCGG AGACCGCACCGATATTCAACTGGCCGCCCTAGAAACTTCCACCCTCTGCCTGATCTTGACCGGCAAGCTCCCTCTGGATC CCCGCATTCGGTCTCGAGCAGAAGAGCTGGAAGTGCCGATTCTCTCGGTGGATCTGGACACCTTCACCACCATCAACCGC ATCGAACGGGTTTTTGGGCAGATTCGCCTGCACGAGGAGGTGAAAGTCCGCTGCATCCAAGAGCTAATGTCAGCGAATTT TGACTTTTCCCGTCTCTATGCTCATTTGGACTTGACACAACCCCTAGTGTCGGCGGTAGGTGCGTAG
Upstream 100 bases:
>100_bases AGAGTCGATCCTAATCGGTTAGTCCAGAACTGAGGAGAGAGCAGCCTCCGTTAGACTGAGTAAGGGATCCCTTCGTCCCT CTCGTTACCGGGAGCCATCC
Downstream 100 bases:
>100_bases GATAAAGTCATTAAGGCTTCTCTACATCTGGTGTCTAAATAGGTAGTTCTCCGAGAGCGAGCACTATACCTGATCGAGAT GAAATAAGCTCAGTTTTGAT
Product: DRTGG domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFVAESLRLTMDQMPPMLLRLNE EALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGPADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLL FVHRQLGSRLAGVLLNDVPPDQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRAEELEVPILSVDLDTFTTINR IERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQPLVSAVGA
Sequences:
>Translated_368_residues MSKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFVAESLRLTMDQMPPMLLRLNE EALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGPADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLL FVHRQLGSRLAGVLLNDVPPDQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRAEELEVPILSVDLDTFTTINR IERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQPLVSAVGA >Mature_367_residues SKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFVAESLRLTMDQMPPMLLRLNEE ALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGPADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLLF VHRQLGSRLAGVLLNDVPPDQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVEDI AVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRAEELEVPILSVDLDTFTTINRI ERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQPLVSAVGA
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 40398; Mature: 40267
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFV CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH AESLRLTMDQMPPMLLRLNEEALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGP HHHHHHHHHHCCHHHEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCC ADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLLFVHRQLGSRLAGVLLNDVPP HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED CCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHCCCEEECCHHHHHHHHH IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRA HHHHHCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHH EELEVPILSVDLDTFTTINRIERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQ HHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH PLVSAVGA HHHHHHCC >Mature Secondary Structure SKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFV CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH AESLRLTMDQMPPMLLRLNEEALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGP HHHHHHHHHHCCHHHEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCC ADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLLFVHRQLGSRLAGVLLNDVPP HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED CCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHCCCEEECCHHHHHHHHH IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRA HHHHHCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHH EELEVPILSVDLDTFTTINRIERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQ HHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH PLVSAVGA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]