| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ntpJ [H]
Identifier: 86608812
GI number: 86608812
Start: 1402446
End: 1403918
Strand: Direct
Name: ntpJ [H]
Synonym: CYB_1338
Alternate gene names: 86608812
Gene position: 1402446-1403918 (Clockwise)
Preceding gene: 86608811
Following gene: 86608813
Centisome position: 46.03
GC content: 60.76
Gene sequence:
>1473_bases ATGAGAGAGGGCTCCGTCCCGCTTCCGCCAGAGGAGGGCTCTGAGCGCTTGGTTCCACCGGTACCATCCCGCGCCCGCCA CCTGCCGACACCGGGCTCGGCATTGTCTCAGTCCTCTAGGGCCTTTGGGAATCGTCTGCAGTGGTTTTTCGGGGGGGACA GGCGTCGCCCGCTGCCGCCGCCATTGCGGCTGGTCACAGGGTTGGGGCTCTTGGCAGTGGTGGGAACTTTGGTGCTCATG TTGCCGGGGATCGGGCGTGGGGATCCCTTGAGCTGGAATGAGGCGCTGTTTACGGCCATGTCGGCCCTGAGCGTGACGGG GCTCTCGACGATTGTGGCGGCGGAGGATCTCACCCTGTTGGGCCAGATTGTGCTGCTGATCCTGATTCAGATTGGCGGGG TGGGCTTCATGGTGTTGGCGGTGGTGGTGTTTCAATTGATCGGGCGGCGCATTTCCCTCCTCAATCGCTTGGCGCTGTGC AATTCGCTGGGGCTCATCGATCCGGGGGCGATCCTGGAATTGACTCGGCGGGTGCTGCTGGGGGTCACTCTCATTGAGTT GGGGGGGGCTTTGCTGCTCTGGGTGCATTGGCGGGATCTCTATGGGCCGGAGCGGGCGGTTTTTCTGGCTATTTTTCACG CGGTGTCCGCCTTTTGTAATGCGGGATTCGACCTGTTTGGCCGGGAAGGGATCCCTACAGATGGTCTGTCGCTGGCGATT TTGGCCGGTCTGATTTTTATCGGCGGTTTGGGCATCCCGGTTTTGTCGGATTTGTTAACCTGGCCGCGGGGCCACCGCCC CTCTCTGCACACCCGGATTACCCTGGGCGTGGTGGTGGTTTTGCTCTGCACGGGCGGCATTGGTTTGTTCTTGGGAGAGA GCTTGCCCGGTGGATCCCTGCTGGAGGTAAGCTGGCCCCACCGCTTGGGCCTGACGTTTTTTCAGTCGGTTTCTGCCCGA ACGGCTGGGTTTGCCGGGATCCCCATTGAGGATTTGACCCCGGCAAGCCAGTTGCTGCTGATGGCTCTCATGTTTATTGG GGCAGCCCCAGCTTCTATGGGGGGCGGCATGACCACCGGCACCTTGGCGGTGTTGGTGTTGGCCCTCTGGGGCTATGCCC GCGGTTTGCCCAGCGCTCAGATTGCCGGGCGCAGCTTGGATCCCTCCATGGTGCGCAAGGCGGCAGCGGTGTTAACGGTT TCTCTGTTTGTGGTATTGTTGGCGGCTTGGTTGATTTTGCTGACCCACAGTAACAGTAGGTTGGATCCGGTGTTGTTTGA GGTGATCTCCGCCTTTGCCACCTGCGGCCTCTCGACGGGCTTTACCGGGGAGCTCAACTGGTTTGGCCAACTGATCATTG TGCTGGTGATGTTCTGGGGCCGGTTGGGGGCATTGACGATTGTCTTGGCCTTGGCTCAACAACAGCCCCGCCCGTTGGTA ACCTACCCTGAAGAGTCGATCCTAATCGGTTAG
Upstream 100 bases:
>100_bases CTCCCCCCGCAGACTACCTGCTGGAAAAGGGGGATTTGCTGGTGGTTCTGGGGGCCAATACCAACATCTCGCGGCTGAAT GAAATGTAGGGAGGGCTCCG
Downstream 100 bases:
>100_bases TCCAGAACTGAGGAGAGAGCAGCCTCCGTTAGACTGAGTAAGGGATCCCTTCGTCCCTCTCGTTACCGGGAGCCATCCGT GTCCAAGTTCCTTTTAATTG
Product: Trk family K(+) transporter
Products: NA
Alternate protein names: Na(+)-translocating ATPase subunit J [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MREGSVPLPPEEGSERLVPPVPSRARHLPTPGSALSQSSRAFGNRLQWFFGGDRRRPLPPPLRLVTGLGLLAVVGTLVLM LPGIGRGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLLGQIVLLILIQIGGVGFMVLAVVVFQLIGRRISLLNRLALC NSLGLIDPGAILELTRRVLLGVTLIELGGALLLWVHWRDLYGPERAVFLAIFHAVSAFCNAGFDLFGREGIPTDGLSLAI LAGLIFIGGLGIPVLSDLLTWPRGHRPSLHTRITLGVVVVLLCTGGIGLFLGESLPGGSLLEVSWPHRLGLTFFQSVSAR TAGFAGIPIEDLTPASQLLLMALMFIGAAPASMGGGMTTGTLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTV SLFVVLLAAWLILLTHSNSRLDPVLFEVISAFATCGLSTGFTGELNWFGQLIIVLVMFWGRLGALTIVLALAQQQPRPLV TYPEESILIG
Sequences:
>Translated_490_residues MREGSVPLPPEEGSERLVPPVPSRARHLPTPGSALSQSSRAFGNRLQWFFGGDRRRPLPPPLRLVTGLGLLAVVGTLVLM LPGIGRGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLLGQIVLLILIQIGGVGFMVLAVVVFQLIGRRISLLNRLALC NSLGLIDPGAILELTRRVLLGVTLIELGGALLLWVHWRDLYGPERAVFLAIFHAVSAFCNAGFDLFGREGIPTDGLSLAI LAGLIFIGGLGIPVLSDLLTWPRGHRPSLHTRITLGVVVVLLCTGGIGLFLGESLPGGSLLEVSWPHRLGLTFFQSVSAR TAGFAGIPIEDLTPASQLLLMALMFIGAAPASMGGGMTTGTLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTV SLFVVLLAAWLILLTHSNSRLDPVLFEVISAFATCGLSTGFTGELNWFGQLIIVLVMFWGRLGALTIVLALAQQQPRPLV TYPEESILIG >Mature_490_residues MREGSVPLPPEEGSERLVPPVPSRARHLPTPGSALSQSSRAFGNRLQWFFGGDRRRPLPPPLRLVTGLGLLAVVGTLVLM LPGIGRGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLLGQIVLLILIQIGGVGFMVLAVVVFQLIGRRISLLNRLALC NSLGLIDPGAILELTRRVLLGVTLIELGGALLLWVHWRDLYGPERAVFLAIFHAVSAFCNAGFDLFGREGIPTDGLSLAI LAGLIFIGGLGIPVLSDLLTWPRGHRPSLHTRITLGVVVVLLCTGGIGLFLGESLPGGSLLEVSWPHRLGLTFFQSVSAR TAGFAGIPIEDLTPASQLLLMALMFIGAAPASMGGGMTTGTLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTV SLFVVLLAAWLILLTHSNSRLDPVLFEVISAFATCGLSTGFTGELNWFGQLIIVLVMFWGRLGALTIVLALAQQQPRPLV TYPEESILIG
Specific function: Involved in ATP-driven sodium extrusion [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 51914; Mature: 51914
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREGSVPLPPEEGSERLVPPVPSRARHLPTPGSALSQSSRAFGNRLQWFFGGDRRRPLPP CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC PLRLVTGLGLLAVVGTLVLMLPGIGRGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQIVLLILIQIGGVGFMVLAVVVFQLIGRRISLLNRLALCNSLGLIDPGAILELTRRVLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GVTLIELGGALLLWVHWRDLYGPERAVFLAIFHAVSAFCNAGFDLFGREGIPTDGLSLAI HHHHHHHCCHHEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHH LAGLIFIGGLGIPVLSDLLTWPRGHRPSLHTRITLGVVVVLLCTGGIGLFLGESLPGGSL HHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCE LEVSWPHRLGLTFFQSVSARTAGFAGIPIEDLTPASQLLLMALMFIGAAPASMGGGMTTG EEECCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHCCCCCHHH TLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTVSLFVVLLAAWLILLTHSNSR HHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LDPVLFEVISAFATCGLSTGFTGELNWFGQLIIVLVMFWGRLGALTIVLALAQQQPRPLV CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TYPEESILIG ECCCCCCCCC >Mature Secondary Structure MREGSVPLPPEEGSERLVPPVPSRARHLPTPGSALSQSSRAFGNRLQWFFGGDRRRPLPP CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC PLRLVTGLGLLAVVGTLVLMLPGIGRGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQIVLLILIQIGGVGFMVLAVVVFQLIGRRISLLNRLALCNSLGLIDPGAILELTRRVLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GVTLIELGGALLLWVHWRDLYGPERAVFLAIFHAVSAFCNAGFDLFGREGIPTDGLSLAI HHHHHHHCCHHEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHH LAGLIFIGGLGIPVLSDLLTWPRGHRPSLHTRITLGVVVVLLCTGGIGLFLGESLPGGSL HHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCE LEVSWPHRLGLTFFQSVSARTAGFAGIPIEDLTPASQLLLMALMFIGAAPASMGGGMTTG EEECCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHCCCCCHHH TLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTVSLFVVLLAAWLILLTHSNSR HHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LDPVLFEVISAFATCGLSTGFTGELNWFGQLIIVLVMFWGRLGALTIVLALAQQQPRPLV CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TYPEESILIG ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8157629 [H]