Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608813

Identifier: 86608813

GI number: 86608813

Start: 1403997

End: 1405103

Strand: Direct

Name: 86608813

Synonym: CYB_1339

Alternate gene names: NA

Gene position: 1403997-1405103 (Clockwise)

Preceding gene: 86608812

Following gene: 86608814

Centisome position: 46.08

GC content: 57.45

Gene sequence:

>1107_bases
GTGTCCAAGTTCCTTTTAATTGGTTCTACTGAGCCCTTCAGCGGTAAGTCGGCTGCCATCTTGGGTTTGGCCAAGCATCT
GCAGCAGCAAGGGATAAAAGTCACCTATGGGAAGCCCATCGGTTCTTGCGAGCGGGAAGATTGCTCGCTGGAAGGGGCCG
ATCCGGATATGCGCTTTGTGGCGGAGTCTCTGCGGCTGACGATGGATCAAATGCCGCCGATGCTGCTCCGGCTCAACGAA
GAGGCTTTGCTGGCTCAAATGAAGCGAGCTCCCGGGGATCCAGCTCCAGAGTGCCCGGTTGCCCCTCTGTTGGAGTTTGT
CCAGCGCTCCCCTGCCGATTTGGTGCTGCTGGAAGGCCCAGCCGATCTTTACGAGGGGGAATTGTTTGGCCTGTCGCTGG
CCAAGATGGCCCAAGCCCTGGATGCTCCGGTACTGCTGATCAGTCGCTACCATTCCTCCTTGGCTGTTGATTCTCTTCTC
TTTGTCCATCGTCAACTGGGATCCCGCTTGGCAGGCGTGCTGCTGAACGATGTGCCGCCCGACCAGGTGCAACCGGCAAA
AACGATCATTCGGCCTTTTTTGGAGGGACACGGGATCCCGGTGCTGGGGATTTTGCCCTCCCATCGCATTTTGCGCAGCA
TCAGCGTTGGGGAGTTGGTGCGGCAACTGGATGCCGAGGTGCTCTGCTGTCCGGACCGGATGGACTTGATGGTCGAAGAC
ATCGCGGTGGGGGCGATGAACGTCAACTCGGCCTTGAAGTACTTCCGTAAGCTGGATCACAAGGCGGTGATCACCGGCGG
AGACCGCACCGATATTCAACTGGCCGCCCTAGAAACTTCCACCCTCTGCCTGATCTTGACCGGCAAGCTCCCTCTGGATC
CCCGCATTCGGTCTCGAGCAGAAGAGCTGGAAGTGCCGATTCTCTCGGTGGATCTGGACACCTTCACCACCATCAACCGC
ATCGAACGGGTTTTTGGGCAGATTCGCCTGCACGAGGAGGTGAAAGTCCGCTGCATCCAAGAGCTAATGTCAGCGAATTT
TGACTTTTCCCGTCTCTATGCTCATTTGGACTTGACACAACCCCTAGTGTCGGCGGTAGGTGCGTAG

Upstream 100 bases:

>100_bases
AGAGTCGATCCTAATCGGTTAGTCCAGAACTGAGGAGAGAGCAGCCTCCGTTAGACTGAGTAAGGGATCCCTTCGTCCCT
CTCGTTACCGGGAGCCATCC

Downstream 100 bases:

>100_bases
GATAAAGTCATTAAGGCTTCTCTACATCTGGTGTCTAAATAGGTAGTTCTCCGAGAGCGAGCACTATACCTGATCGAGAT
GAAATAAGCTCAGTTTTGAT

Product: DRTGG domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFVAESLRLTMDQMPPMLLRLNE
EALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGPADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLL
FVHRQLGSRLAGVLLNDVPPDQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED
IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRAEELEVPILSVDLDTFTTINR
IERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQPLVSAVGA

Sequences:

>Translated_368_residues
MSKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFVAESLRLTMDQMPPMLLRLNE
EALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGPADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLL
FVHRQLGSRLAGVLLNDVPPDQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED
IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRAEELEVPILSVDLDTFTTINR
IERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQPLVSAVGA
>Mature_367_residues
SKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFVAESLRLTMDQMPPMLLRLNEE
ALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGPADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLLF
VHRQLGSRLAGVLLNDVPPDQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVEDI
AVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRAEELEVPILSVDLDTFTTINRI
ERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQPLVSAVGA

Specific function: Unknown

COG id: COG0857

COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1212 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR010766 [H]

Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]

EC number: NA

Molecular weight: Translated: 40398; Mature: 40267

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFV
CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
AESLRLTMDQMPPMLLRLNEEALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGP
HHHHHHHHHHCCHHHEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCC
ADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLLFVHRQLGSRLAGVLLNDVPP
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED
CCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHCCCEEECCHHHHHHHHH
IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRA
HHHHHCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHH
EELEVPILSVDLDTFTTINRIERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQ
HHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PLVSAVGA
HHHHHHCC
>Mature Secondary Structure 
SKFLLIGSTEPFSGKSAAILGLAKHLQQQGIKVTYGKPIGSCEREDCSLEGADPDMRFV
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
AESLRLTMDQMPPMLLRLNEEALLAQMKRAPGDPAPECPVAPLLEFVQRSPADLVLLEGP
HHHHHHHHHHCCHHHEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCC
ADLYEGELFGLSLAKMAQALDAPVLLISRYHSSLAVDSLLFVHRQLGSRLAGVLLNDVPP
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DQVQPAKTIIRPFLEGHGIPVLGILPSHRILRSISVGELVRQLDAEVLCCPDRMDLMVED
CCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHCCCEEECCHHHHHHHHH
IAVGAMNVNSALKYFRKLDHKAVITGGDRTDIQLAALETSTLCLILTGKLPLDPRIRSRA
HHHHHCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHH
EELEVPILSVDLDTFTTINRIERVFGQIRLHEEVKVRCIQELMSANFDFSRLYAHLDLTQ
HHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PLVSAVGA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]