| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608789
Identifier: 86608789
GI number: 86608789
Start: 1377268
End: 1377837
Strand: Reverse
Name: 86608789
Synonym: CYB_1314
Alternate gene names: NA
Gene position: 1377837-1377268 (Counterclockwise)
Preceding gene: 86608790
Following gene: 86608788
Centisome position: 45.22
GC content: 57.19
Gene sequence:
>570_bases ATGATTTTGAATAAATCAGAGCCCATGATGAACACCGCCGAAGCCCTTGAGATTCTCAACCTTCCGCCGGACGCAACCGA GCGGCAGATCCGGGGGCGACTGTTTCAGGAATACCAAACCCTCAGTACTGCCCTCGCAGAACTGGAGGACGAGCGACAAA GACCCTTGCTAGAGGCGCAACTGGCGCGGCTGAATGAGGCGCGGGATGTATTGCTTAGCGGGGGATCCCAGGCTGAGAAG GGTTTGTCTTGGGTCAGCCCAGAGGACTTGCCCCCCCAGGTGATTGTGCTGCTTTACCAAGCCAATGGGCAGGAGGGGAT CTGTACGCGCCAGGTTGGGGGTCAAGATATCGTCATTGCTTTCGAGAGCTCGTTTGCGGCAAGAAAATATGCGCAGCGGT TGGCTCAACAGGGACTGCCCAAGCCCTTGGCAGAACGCTTTGACACGCAGGAGATCGTCGATTTTTGCCGCAGCGGAGGG TATGGGTTGATGGTGGTTCCGGCCAGCGAAACGCTGGAGCCTCTACAAGAAAGTACGGAAGCTGCCCGTGATTGGCAGGG CAGGTCTTGA
Upstream 100 bases:
>100_bases GCGAACGGTGAGTCCACCCTCTCTTCTGGCCGAGAAAGCGGGCAGCCACGATCATAGGAGAATTTCTCTCCAGAGACTCT CAAAGCAGCTAGTCTAGGCA
Downstream 100 bases:
>100_bases TGTCGTTTGGCCTCGATCCACTTGCGTTAAGGGTGCCCTCGATGATTAGTGTGGAACCGATCTCTGTGGACGAGTTTCGC CAGCTCATGGCCGCCGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQLARLNEARDVLLSGGSQAEK GLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIAFESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGG YGLMVVPASETLEPLQESTEAARDWQGRS
Sequences:
>Translated_189_residues MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQLARLNEARDVLLSGGSQAEK GLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIAFESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGG YGLMVVPASETLEPLQESTEAARDWQGRS >Mature_189_residues MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQLARLNEARDVLLSGGSQAEK GLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIAFESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGG YGLMVVPASETLEPLQESTEAARDWQGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20989; Mature: 20989
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQ CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LARLNEARDVLLSGGSQAEKGLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIA HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCEECCCCCCEEEEE FESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGGYGLMVVPASETLEPLQESTE ECCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH AARDWQGRS HHHCCCCCC >Mature Secondary Structure MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQ CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LARLNEARDVLLSGGSQAEKGLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIA HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCEECCCCCCEEEEE FESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGGYGLMVVPASETLEPLQESTE ECCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH AARDWQGRS HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA