Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608788

Identifier: 86608788

GI number: 86608788

Start: 1376501

End: 1377226

Strand: Reverse

Name: 86608788

Synonym: CYB_1313

Alternate gene names: NA

Gene position: 1377226-1376501 (Counterclockwise)

Preceding gene: 86608789

Following gene: 86608787

Centisome position: 45.2

GC content: 57.44

Gene sequence:

>726_bases
ATGATTAGTGTGGAACCGATCTCTGTGGACGAGTTTCGCCAGCTCATGGCCGCCGATCTGGACGCTTGCTGCGAGGCCTT
TGATTTGCGGGCGGAGTACCTGCGTCTGCAGCAACAGCGGCTACGCTCCTGGGGCATGCTGGCCTTTGGTTTGATAGCAA
TAGCCTTGGTCATCTTCTTGGGGATGCGGGATCCCGGCTCTTGGGTGCCCTATGCCGCGGCTGCCGGGATCCTACTGCTG
CTCCTGTTGGGGATCCTGAGAGCCAACTTGCGCTTGGGAAAAAGCCTGCATCGCATCCGCCAGCGTTGGCAGGAAGCCCA
CCTGCTCAACAGCACCCCTGAGATGATGAAGTTTGCCACCGATCTGGCCCGCAAAGTAAAAGACTACAACCACTGGGTCA
ACGAGCTCCAACAATCCCTGCAGGGGGGGCAGCATTGGCGGGATTTTCGGCAACTCAGCGAGGCCGAGCAGAAGTACATC
CAATCGCTGTTTTTACAAGTGCGGGCCCAACTGGTGATGGCCCTACAGGTGTGCCGAGCTTTGATCGAGGATCCACAAGC
CTCTGTGGCTCAGTATCTCAACCAAATGGTTGCCCGGGATCAGCAACTGTTGGAGCAATTTACCGCCAAAAACCTGACCG
CCAACCGCTACGTGACCTTGGCTCGCCAGCTATCTGTGCTGGAGGAAGATTTGCAAGCCCAGCTCAGAGCCTTGGGATCC
CGATGA

Upstream 100 bases:

>100_bases
CGCTGGAGCCTCTACAAGAAAGTACGGAAGCTGCCCGTGATTGGCAGGGCAGGTCTTGATGTCGTTTGGCCTCGATCCAC
TTGCGTTAAGGGTGCCCTCG

Downstream 100 bases:

>100_bases
TACCCTGTTGGAGGTGTCCAGCAGCGTATTCATGGGCAGTAGAGGCACTCGAAAATTGTACGGCCTGTTGCTTGCCGGCG
GACTGGGCTTGCTGGGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MISVEPISVDEFRQLMAADLDACCEAFDLRAEYLRLQQQRLRSWGMLAFGLIAIALVIFLGMRDPGSWVPYAAAAGILLL
LLLGILRANLRLGKSLHRIRQRWQEAHLLNSTPEMMKFATDLARKVKDYNHWVNELQQSLQGGQHWRDFRQLSEAEQKYI
QSLFLQVRAQLVMALQVCRALIEDPQASVAQYLNQMVARDQQLLEQFTAKNLTANRYVTLARQLSVLEEDLQAQLRALGS
R

Sequences:

>Translated_241_residues
MISVEPISVDEFRQLMAADLDACCEAFDLRAEYLRLQQQRLRSWGMLAFGLIAIALVIFLGMRDPGSWVPYAAAAGILLL
LLLGILRANLRLGKSLHRIRQRWQEAHLLNSTPEMMKFATDLARKVKDYNHWVNELQQSLQGGQHWRDFRQLSEAEQKYI
QSLFLQVRAQLVMALQVCRALIEDPQASVAQYLNQMVARDQQLLEQFTAKNLTANRYVTLARQLSVLEEDLQAQLRALGS
R
>Mature_241_residues
MISVEPISVDEFRQLMAADLDACCEAFDLRAEYLRLQQQRLRSWGMLAFGLIAIALVIFLGMRDPGSWVPYAAAAGILLL
LLLGILRANLRLGKSLHRIRQRWQEAHLLNSTPEMMKFATDLARKVKDYNHWVNELQQSLQGGQHWRDFRQLSEAEQKYI
QSLFLQVRAQLVMALQVCRALIEDPQASVAQYLNQMVARDQQLLEQFTAKNLTANRYVTLARQLSVLEEDLQAQLRALGS
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27666; Mature: 27666

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVEPISVDEFRQLMAADLDACCEAFDLRAEYLRLQQQRLRSWGMLAFGLIAIALVIFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMRDPGSWVPYAAAAGILLLLLLGILRANLRLGKSLHRIRQRWQEAHLLNSTPEMMKFAT
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DLARKVKDYNHWVNELQQSLQGGQHWRDFRQLSEAEQKYIQSLFLQVRAQLVMALQVCRA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIEDPQASVAQYLNQMVARDQQLLEQFTAKNLTANRYVTLARQLSVLEEDLQAQLRALGS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA