| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608765
Identifier: 86608765
GI number: 86608765
Start: 1345865
End: 1348027
Strand: Reverse
Name: 86608765
Synonym: CYB_1290
Alternate gene names: NA
Gene position: 1348027-1345865 (Counterclockwise)
Preceding gene: 86608768
Following gene: 86608760
Centisome position: 44.25
GC content: 46.83
Gene sequence:
>2163_bases ATGGAAAATTCCAACAAAGAAACTCTGCAACCGCGAGTTCTCCTGAGCTGGCCAGTTGCGCCAGACTACATCCCACCGCC GCAGCTTTCAGATCGGCAAGTAACTGTCTGTCCCAAAAAAAGAGTGGGGGGCTGTGGACTAGGCTATGTCAACCGTCGTG AAGGCTTGGTGGAGTGTCCGGAAGGAGATTATGACCTCTATGACTTTGTCCAGCAGTCTGAGCAGATTGTGGATAAAGAG TTTGACTTGGTGATTGTACTAGCTTCCAGCTGCGACTACAGCAACCCCTTCAACACGAAAAAATTTGGCTGTCCAACCGT CTTACTAGCCGGAGATACGCATCATCGCCACTTCCCCATCCAACATCTTTTGGCCTACTGGGGCGTTGAAGCCTTTGATT ATGTTGTTACTGCTCACAACCGCCAGCACCTGCACTGGTTTGCCGCGGCGGGCGCGGAAAACCTGGCCTGGCTACCTCTC ATCTTCATGCATACGGTTGTCCACAAGTGGGTAGAAGCAAGAGAAAGCCAAGTTGTCTTTATTGGCCATCAGGGATCCGG GCATCCCAGACGTTCCCGTCTGGTCGAAGCCATAAAGAGGGCACACTTGCCCATTCTTGCCAAAACTGCCAACCGTCAAG AGGCAGCCCGCCTATTTGCCGAATCGCTGATTTCGTTTAACTGCAGCCTGAATGGGGATCTGAACCTTAGGAACCTGGAA GTGATTTCTGCGGGTGGCTTTTTGCTGACAGACAAGCTCTCCTTTGCATCCGGCTTTGATGAGTATCTGAGCCCCGGCTT ATACTGCGACGTCTATAGTTCTGAGCTGGAGCTAGTTGAGAAAATCAAGTTTTACCTAGAAAATCCAGGGCTGGCTCTAG AGATAGCTAAAAGAGCTTATGAAAAGTTTCTTGTGGACTGGCATCCCAAGCATCGGATAGCCGATCTGATGAATTGGGTT TTCAAGGGAGAGCTACCCAACTTTTACGCAGCTAAGTCCGATCCCAGATTTTTCATTAGCACTGCCTACAGAGATCTTGT CAATACACGCCTTGCTATCTACGAACCTGTTCAGGAGTTACACCGTGTAGAGGAGCAACTTAAGGTACTGGTTAGCAAAG ACTGCCCAGTAGCAGTTGTGGCAGATCTCCTGGATCTGCCGAGACTAGAAGTCTATGTTGAGGCCGGGTTCCCAGTGTCT GAGCTTCCCAAGGACGAGAGGGTCGTTTCCAGAGTACATGTCTGGGAGGAAGAGTCCAGCCACTTAGGTACTGCGACTTG GGATGTTCTGATTGCCAGATCCAACAGCCATCTTACTTCTCGACTCCTGCCCTACTTAAAATTTGTTTTTGTCCTTGATG AACAAAATCAATTGGTGTTCTCGAACGCAACAAAGTTAGCGAACGTTGAAAGAGTTCCCTTGGGCGTGAATAGAGCGGAT GGATCTTCTTGGACACTACATCTCAATTTTTATAGGGAGGAAGAAGACGCAGCGCTATTCACGACTGACGAAATCTTTAG TAAGCAGTCATATCCTTTTTTAAACTTCGTCGATGGCGTATCAATAATTGTTGATGTAGGAGCAAACATAGGCATCGCAA GCGCCTACTTTCGAATGCTTTATCCAAATGCTACTATTCTTTGCTTCGAGCCTGACCCTGTAGCTCTTCACTTGCTGAAG CTAAACAGCCTAGAGATAGGCGGCTGCACTGTATACCCTTTTGGGCTGTACAGTGATGATATCACCAAGACTTTCTACAG TAGTCTTGTATCGTCCCTTTGTAGTTCGATACACAAGAACCAACATGGTGACTTTCCAAGAGTTGTACAGCTTGTAAAGG CAAGCTCATTCCTAGGCTCATTTCTAAAGAGTGCTGGCGCTTACAACATCGATATTCTCAAGATAGATGCTGAAGGTAGT GAGACCCAAGTATTAAAGGATTTGTTCGAAATTCTAGTCGACATTAAGATAATATACCTAGAGTTTCACTCTGAAGAAGA TAGACGATTAATAGACCAGATCCTATGCCCTACCCATGTTTTGTACAAGGGAAACATAGTTCACACACATAGAGGTACTC TTTGCTACTTGAGTAGAAGGTATATCCTTCATGACGTTTCAATAGAACCTCTTCGGTCAAAAGTTCTCCCAGTCAGTAGC TAA
Upstream 100 bases:
>100_bases ATTATGGATGCACGTAGGGCAGGATAGTGCAAAACTAGCCCTCTTTGTAGCCTGGGCAGAAGTTACACTTTGTCAGCAGC ACTGATTAGAAGGACGAGCT
Downstream 100 bases:
>100_bases GGCCACTGGGGAAGTTGACAAAGGAGGTTCTAGCTAGAGCATGTAGTTTCAGGATCGACGCCCACTTCGAGCATTTTTGC GTTGGGGGCTCTATCCGTGC
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: Methyltransferase FkbM Family; TPR Repeat-Containing Protein
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MENSNKETLQPRVLLSWPVAPDYIPPPQLSDRQVTVCPKKRVGGCGLGYVNRREGLVECPEGDYDLYDFVQQSEQIVDKE FDLVIVLASSCDYSNPFNTKKFGCPTVLLAGDTHHRHFPIQHLLAYWGVEAFDYVVTAHNRQHLHWFAAAGAENLAWLPL IFMHTVVHKWVEARESQVVFIGHQGSGHPRRSRLVEAIKRAHLPILAKTANRQEAARLFAESLISFNCSLNGDLNLRNLE VISAGGFLLTDKLSFASGFDEYLSPGLYCDVYSSELELVEKIKFYLENPGLALEIAKRAYEKFLVDWHPKHRIADLMNWV FKGELPNFYAAKSDPRFFISTAYRDLVNTRLAIYEPVQELHRVEEQLKVLVSKDCPVAVVADLLDLPRLEVYVEAGFPVS ELPKDERVVSRVHVWEEESSHLGTATWDVLIARSNSHLTSRLLPYLKFVFVLDEQNQLVFSNATKLANVERVPLGVNRAD GSSWTLHLNFYREEEDAALFTTDEIFSKQSYPFLNFVDGVSIIVDVGANIGIASAYFRMLYPNATILCFEPDPVALHLLK LNSLEIGGCTVYPFGLYSDDITKTFYSSLVSSLCSSIHKNQHGDFPRVVQLVKASSFLGSFLKSAGAYNIDILKIDAEGS ETQVLKDLFEILVDIKIIYLEFHSEEDRRLIDQILCPTHVLYKGNIVHTHRGTLCYLSRRYILHDVSIEPLRSKVLPVSS
Sequences:
>Translated_720_residues MENSNKETLQPRVLLSWPVAPDYIPPPQLSDRQVTVCPKKRVGGCGLGYVNRREGLVECPEGDYDLYDFVQQSEQIVDKE FDLVIVLASSCDYSNPFNTKKFGCPTVLLAGDTHHRHFPIQHLLAYWGVEAFDYVVTAHNRQHLHWFAAAGAENLAWLPL IFMHTVVHKWVEARESQVVFIGHQGSGHPRRSRLVEAIKRAHLPILAKTANRQEAARLFAESLISFNCSLNGDLNLRNLE VISAGGFLLTDKLSFASGFDEYLSPGLYCDVYSSELELVEKIKFYLENPGLALEIAKRAYEKFLVDWHPKHRIADLMNWV FKGELPNFYAAKSDPRFFISTAYRDLVNTRLAIYEPVQELHRVEEQLKVLVSKDCPVAVVADLLDLPRLEVYVEAGFPVS ELPKDERVVSRVHVWEEESSHLGTATWDVLIARSNSHLTSRLLPYLKFVFVLDEQNQLVFSNATKLANVERVPLGVNRAD GSSWTLHLNFYREEEDAALFTTDEIFSKQSYPFLNFVDGVSIIVDVGANIGIASAYFRMLYPNATILCFEPDPVALHLLK LNSLEIGGCTVYPFGLYSDDITKTFYSSLVSSLCSSIHKNQHGDFPRVVQLVKASSFLGSFLKSAGAYNIDILKIDAEGS ETQVLKDLFEILVDIKIIYLEFHSEEDRRLIDQILCPTHVLYKGNIVHTHRGTLCYLSRRYILHDVSIEPLRSKVLPVSS >Mature_720_residues MENSNKETLQPRVLLSWPVAPDYIPPPQLSDRQVTVCPKKRVGGCGLGYVNRREGLVECPEGDYDLYDFVQQSEQIVDKE FDLVIVLASSCDYSNPFNTKKFGCPTVLLAGDTHHRHFPIQHLLAYWGVEAFDYVVTAHNRQHLHWFAAAGAENLAWLPL IFMHTVVHKWVEARESQVVFIGHQGSGHPRRSRLVEAIKRAHLPILAKTANRQEAARLFAESLISFNCSLNGDLNLRNLE VISAGGFLLTDKLSFASGFDEYLSPGLYCDVYSSELELVEKIKFYLENPGLALEIAKRAYEKFLVDWHPKHRIADLMNWV FKGELPNFYAAKSDPRFFISTAYRDLVNTRLAIYEPVQELHRVEEQLKVLVSKDCPVAVVADLLDLPRLEVYVEAGFPVS ELPKDERVVSRVHVWEEESSHLGTATWDVLIARSNSHLTSRLLPYLKFVFVLDEQNQLVFSNATKLANVERVPLGVNRAD GSSWTLHLNFYREEEDAALFTTDEIFSKQSYPFLNFVDGVSIIVDVGANIGIASAYFRMLYPNATILCFEPDPVALHLLK LNSLEIGGCTVYPFGLYSDDITKTFYSSLVSSLCSSIHKNQHGDFPRVVQLVKASSFLGSFLKSAGAYNIDILKIDAEGS ETQVLKDLFEILVDIKIIYLEFHSEEDRRLIDQILCPTHVLYKGNIVHTHRGTLCYLSRRYILHDVSIEPLRSKVLPVSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81569; Mature: 81569
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSNKETLQPRVLLSWPVAPDYIPPPQLSDRQVTVCPKKRVGGCGLGYVNRREGLVECP CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECC EGDYDLYDFVQQSEQIVDKEFDLVIVLASSCDYSNPFNTKKFGCPTVLLAGDTHHRHFPI CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCH QHLLAYWGVEAFDYVVTAHNRQHLHWFAAAGAENLAWLPLIFMHTVVHKWVEARESQVVF HHHHHHHCHHHHEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE IGHQGSGHPRRSRLVEAIKRAHLPILAKTANRQEAARLFAESLISFNCSLNGDLNLRNLE EECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEE VISAGGFLLTDKLSFASGFDEYLSPGLYCDVYSSELELVEKIKFYLENPGLALEIAKRAY EEECCCEEEEECCHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEHHHHHHHH EKFLVDWHPKHRIADLMNWVFKGELPNFYAAKSDPRFFISTAYRDLVNTRLAIYEPVQEL HHHHHCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHH HRVEEQLKVLVSKDCPVAVVADLLDLPRLEVYVEAGFPVSELPKDERVVSRVHVWEEESS HHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCC HLGTATWDVLIARSNSHLTSRLLPYLKFVFVLDEQNQLVFSNATKLANVERVPLGVNRAD CCCCEEEEEEEEECCCHHHHHHHHHHEEEEEECCCCCEEEECCHHHCCCEECCCCCCCCC GSSWTLHLNFYREEEDAALFTTDEIFSKQSYPFLNFVDGVSIIVDVGANIGIASAYFRML CCEEEEEEEEEECCCCCEEEEEHHHHCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHH YPNATILCFEPDPVALHLLKLNSLEIGGCTVYPFGLYSDDITKTFYSSLVSSLCSSIHKN CCCCEEEEECCCCEEEEEEEECCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC QHGDFPRVVQLVKASSFLGSFLKSAGAYNIDILKIDAEGSETQVLKDLFEILVDIKIIYL CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCEEEEEE EFHSEEDRRLIDQILCPTHVLYKGNIVHTHRGTLCYLSRRYILHDVSIEPLRSKVLPVSS EECCCHHHHHHHHHHCCCEEEEECCEEEECCCCEEEEECEEEEEECCCCHHHHCCCCCCC >Mature Secondary Structure MENSNKETLQPRVLLSWPVAPDYIPPPQLSDRQVTVCPKKRVGGCGLGYVNRREGLVECP CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECC EGDYDLYDFVQQSEQIVDKEFDLVIVLASSCDYSNPFNTKKFGCPTVLLAGDTHHRHFPI CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCH QHLLAYWGVEAFDYVVTAHNRQHLHWFAAAGAENLAWLPLIFMHTVVHKWVEARESQVVF HHHHHHHCHHHHEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE IGHQGSGHPRRSRLVEAIKRAHLPILAKTANRQEAARLFAESLISFNCSLNGDLNLRNLE EECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEE VISAGGFLLTDKLSFASGFDEYLSPGLYCDVYSSELELVEKIKFYLENPGLALEIAKRAY EEECCCEEEEECCHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEHHHHHHHH EKFLVDWHPKHRIADLMNWVFKGELPNFYAAKSDPRFFISTAYRDLVNTRLAIYEPVQEL HHHHHCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHH HRVEEQLKVLVSKDCPVAVVADLLDLPRLEVYVEAGFPVSELPKDERVVSRVHVWEEESS HHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCC HLGTATWDVLIARSNSHLTSRLLPYLKFVFVLDEQNQLVFSNATKLANVERVPLGVNRAD CCCCEEEEEEEEECCCHHHHHHHHHHEEEEEECCCCCEEEECCHHHCCCEECCCCCCCCC GSSWTLHLNFYREEEDAALFTTDEIFSKQSYPFLNFVDGVSIIVDVGANIGIASAYFRML CCEEEEEEEEEECCCCCEEEEEHHHHCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHH YPNATILCFEPDPVALHLLKLNSLEIGGCTVYPFGLYSDDITKTFYSSLVSSLCSSIHKN CCCCEEEEECCCCEEEEEEEECCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC QHGDFPRVVQLVKASSFLGSFLKSAGAYNIDILKIDAEGSETQVLKDLFEILVDIKIIYL CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCEEEEEE EFHSEEDRRLIDQILCPTHVLYKGNIVHTHRGTLCYLSRRYILHDVSIEPLRSKVLPVSS EECCCHHHHHHHHHHCCCEEEEECCEEEECCCCEEEEECEEEEEECCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA