| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608643
Identifier: 86608643
GI number: 86608643
Start: 1205039
End: 1206028
Strand: Reverse
Name: 86608643
Synonym: CYB_1167
Alternate gene names: NA
Gene position: 1206028-1205039 (Counterclockwise)
Preceding gene: 86608645
Following gene: 86608642
Centisome position: 39.58
GC content: 58.18
Gene sequence:
>990_bases ATGTCGATTGTTGCCGAGTCCTTTCAAACCTATCTGCGCCGCCGCCGTCGTCTTCTAGCCCGCCGTCTCAAGCGACAGCA GGGCTGGGTCGTGGTTTTGGCTCTGCTGGCTTTGTACTTGCTCAGTTGGGATGCGCTGGGCGAAGATGGGTCACTATCGC ACCTGTGGAGGGGACAACCCCTGTGGCTGGTGTTGATCCCGCTGTTGGGGGGAGGGCTGTACAGCTTGGGCGCCGGGGTG ATCTGGATGCTGCGCCAGCGCTGGTCTGCCCAGCTGTTGGCCGAGATGATCAGCTTGCCCCATTTGACTTTGGCTGCCCT GATCTGGCTGGGGTTAGCCGTTTGGGGAGAGCACCTTTCGCCTTTCCTGTTGCGACAAAAAAACCAATTGTTGGCGGGCC TGTTGATCAGTTGGCTGTTGGCCCAGGGGTGGAGTTTTTTCCAGACAGGTTGGGTAGTAGAGGCTGGGCAACTGTGGGCC GACTATCTGCAGGAGCTGCGCGGTTCTGTATTACAGCCTTGCTACCAGCGCCTGGAAGCCTGTCGTCGCTCGCTTCATCT TTACCACGCCATTTGGCAAGACCTGCAACTGGAAGAACTGGAGGCCCAGCACCTGATTCAACTGTTGTCTGAGTCGTTGC TGCCGCTGACCCTGCCGCTCAAGGTCTATGCTCAGCGGGTTCACCATTGCTGTCAGCAGTTGGCAGCCCTGCTGGCGCAA ATGCAGGAGCGGGTAGAGCGGTTGGAGCAGGTGCTTTTGAATGTAGAGCTGGAGTTGGCCTCTCATCAGTTGCTTCAGGC TCAGCCGCAGCCGATTAACTTGCTGGCGGAAGATTGGGCCAGCTGTCAGGAGCTGGATTTGCAGGAGTTGGTTTGCTTAA ACCAAGAGCTGCTGGGCACCGACCGTTCTTTGCAGGGCTTGACCCAAGAGCTGAAAGGCTGGGCCGACAGAGCCATCCCC GCTGGATTGAAACTGGGATCCCTGGGATGA
Upstream 100 bases:
>100_bases TACAGAAGCCAGATGACCTAGCAAAGTTAAGACTTATGATCGTGAAGGAGCGCTCCAGGCCGGTGGGGGTATTGGTAGGG ATCCGCAGTGCCATTTTTTT
Downstream 100 bases:
>100_bases AGAAGGCTGACGCTCCTTCCTCTGAGCCTCCAGAGCTCAAGGCCCTGTGGGAAAGCTGGCTGGCGGATCTGGGTTGGCAG CCTTCTGAACAGCAGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSIVAESFQTYLRRRRRLLARRLKRQQGWVVVLALLALYLLSWDALGEDGSLSHLWRGQPLWLVLIPLLGGGLYSLGAGV IWMLRQRWSAQLLAEMISLPHLTLAALIWLGLAVWGEHLSPFLLRQKNQLLAGLLISWLLAQGWSFFQTGWVVEAGQLWA DYLQELRGSVLQPCYQRLEACRRSLHLYHAIWQDLQLEELEAQHLIQLLSESLLPLTLPLKVYAQRVHHCCQQLAALLAQ MQERVERLEQVLLNVELELASHQLLQAQPQPINLLAEDWASCQELDLQELVCLNQELLGTDRSLQGLTQELKGWADRAIP AGLKLGSLG
Sequences:
>Translated_329_residues MSIVAESFQTYLRRRRRLLARRLKRQQGWVVVLALLALYLLSWDALGEDGSLSHLWRGQPLWLVLIPLLGGGLYSLGAGV IWMLRQRWSAQLLAEMISLPHLTLAALIWLGLAVWGEHLSPFLLRQKNQLLAGLLISWLLAQGWSFFQTGWVVEAGQLWA DYLQELRGSVLQPCYQRLEACRRSLHLYHAIWQDLQLEELEAQHLIQLLSESLLPLTLPLKVYAQRVHHCCQQLAALLAQ MQERVERLEQVLLNVELELASHQLLQAQPQPINLLAEDWASCQELDLQELVCLNQELLGTDRSLQGLTQELKGWADRAIP AGLKLGSLG >Mature_328_residues SIVAESFQTYLRRRRRLLARRLKRQQGWVVVLALLALYLLSWDALGEDGSLSHLWRGQPLWLVLIPLLGGGLYSLGAGVI WMLRQRWSAQLLAEMISLPHLTLAALIWLGLAVWGEHLSPFLLRQKNQLLAGLLISWLLAQGWSFFQTGWVVEAGQLWAD YLQELRGSVLQPCYQRLEACRRSLHLYHAIWQDLQLEELEAQHLIQLLSESLLPLTLPLKVYAQRVHHCCQQLAALLAQM QERVERLEQVLLNVELELASHQLLQAQPQPINLLAEDWASCQELDLQELVCLNQELLGTDRSLQGLTQELKGWADRAIPA GLKLGSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37477; Mature: 37346
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVAESFQTYLRRRRRLLARRLKRQQGWVVVLALLALYLLSWDALGEDGSLSHLWRGQP CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC LWLVLIPLLGGGLYSLGAGVIWMLRQRWSAQLLAEMISLPHLTLAALIWLGLAVWGEHLS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PFLLRQKNQLLAGLLISWLLAQGWSFFQTGWVVEAGQLWADYLQELRGSVLQPCYQRLEA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRRSLHLYHAIWQDLQLEELEAQHLIQLLSESLLPLTLPLKVYAQRVHHCCQQLAALLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MQERVERLEQVLLNVELELASHQLLQAQPQPINLLAEDWASCQELDLQELVCLNQELLGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC DRSLQGLTQELKGWADRAIPAGLKLGSLG CHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SIVAESFQTYLRRRRRLLARRLKRQQGWVVVLALLALYLLSWDALGEDGSLSHLWRGQP CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC LWLVLIPLLGGGLYSLGAGVIWMLRQRWSAQLLAEMISLPHLTLAALIWLGLAVWGEHLS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PFLLRQKNQLLAGLLISWLLAQGWSFFQTGWVVEAGQLWADYLQELRGSVLQPCYQRLEA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRRSLHLYHAIWQDLQLEELEAQHLIQLLSESLLPLTLPLKVYAQRVHHCCQQLAALLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MQERVERLEQVLLNVELELASHQLLQAQPQPINLLAEDWASCQELDLQELVCLNQELLGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC DRSLQGLTQELKGWADRAIPAGLKLGSLG CHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA