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The map label for this gene is perM [C]

Identifier: 86608635

GI number: 86608635

Start: 1197014

End: 1198162

Strand: Reverse

Name: perM [C]

Synonym: CYB_1159

Alternate gene names: 86608635

Gene position: 1198162-1197014 (Counterclockwise)

Preceding gene: 86608636

Following gene: 86608632

Centisome position: 39.33

GC content: 60.92

Gene sequence:

>1149_bases
ATGAATCGCTTCTCACCCTTGCAGCGGTTGCTGCTCACCTGGATCTTGATCGTCATCAGCGGCTGGCTGGCCATACAGGT
GGGTCGGCTGTTTGGGCATTTGCTCACCACCATCCTGACAGCGGCGGTGCTGGCCTTTTTGCTCAACTACCCGGTGCAGG
TGCTGCGGCGCTATCGGGTCAGTCGAGGTTTGGCGGTCACCCTGGTCTTTGCTCTCTCGGTGGTGCTGCTGGTCTTGGTG
GGGATCGCCGTGGTGCCGGTCTTGGCCAAGCAAGTGGTGCAGCTGGGGGCGCGGATCCCAGAGTGGGTGGACACCTTACA
AAATTGGCTCGACCAGATTAGCCTTTGGGCCGCCGAGCGCAACATCAACCTTGGCCAGACGGAGCTGGTCAATACCCTTC
TCAACCGCCTGCAGGCCAGCGCCGAGAAAATTGCCGGCCAATCCCTAGATCTCCTTCTGGGTACGTTCAACCAGGTGATC
GACTTGGTGCTGGTGCTGGTGTTGGCCCTCTACATGCTGCTCTACGGGGGCCAGTTCTGGCAGGGGTTGCTCAGCCTCTT
CCCCAAACCTTGGGGGCCGCGCATTGGCGAAGCCCTAGCCCTCAGCTTTCAGAACTTCCTCATCAGCCAGTTGGTGTTGG
GGTTCATCATGGCCCTGATGCTGGTGCCGGTTTTTGGGTTTTTGCGGGTACCTTTCGGGCTCCTGTTTGGCCTGCTGATC
GGCCTGCTGGAGGTCATCCCCCTGGTGGGGGGGGTGATTGGCATTGGGGCGGCGGCGGTGTTGCTGGCCTTTCAGGACAT
TTGGCTCAGCCTTAAAGTGGTGCTGGTTTCCCTGATCGTGCAGCAGGTGAAGGATCGGGTCATCGCCCCCCGCCTGATGG
GAGAGCTGATCGGGCTAAATCCAGTGTGGATCTTGATTGCCCTGTTGGTGGGGGCGCAACTGGGGGGCATCCTGGGCGTG
ATCGTCGCCATTCCCCTCAGCAGTGTGGTGAAAAGCCTTTACGAGATCGCCCGCTCTGCCGACCTGGCCGCCGAAGATGA
GTTGGGTTCCGGTGTAAAAGGATCCCCGCAAGGGCTCCGTCCGAGTAGCGCCAACGGCGAACCCCGCCGGGATCCTACCC
TGCCCAAGCCGGAGACCCAGCAGATCTAG

Upstream 100 bases:

>100_bases
ACCTGGCCAGCGGCATTACCGGCCAGGTGATCTACGTGGATAGTGGGTATAGCATCCTGGGTTTTTAAGCGCTTTGGGAT
CCCTTGGGGATGGCTCCGGC

Downstream 100 bases:

>100_bases
CTGCTCCAAAAGGGAAGAGGCTCTGCCCATGCGATTCAGGCGATCGCGTTAACCGGCAGGCAAACAGAGGCTCAATCCTG
GTAAGCCCAGTTGCTGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNRFSPLQRLLLTWILIVISGWLAIQVGRLFGHLLTTILTAAVLAFLLNYPVQVLRRYRVSRGLAVTLVFALSVVLLVLV
GIAVVPVLAKQVVQLGARIPEWVDTLQNWLDQISLWAAERNINLGQTELVNTLLNRLQASAEKIAGQSLDLLLGTFNQVI
DLVLVLVLALYMLLYGGQFWQGLLSLFPKPWGPRIGEALALSFQNFLISQLVLGFIMALMLVPVFGFLRVPFGLLFGLLI
GLLEVIPLVGGVIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKDRVIAPRLMGELIGLNPVWILIALLVGAQLGGILGV
IVAIPLSSVVKSLYEIARSADLAAEDELGSGVKGSPQGLRPSSANGEPRRDPTLPKPETQQI

Sequences:

>Translated_382_residues
MNRFSPLQRLLLTWILIVISGWLAIQVGRLFGHLLTTILTAAVLAFLLNYPVQVLRRYRVSRGLAVTLVFALSVVLLVLV
GIAVVPVLAKQVVQLGARIPEWVDTLQNWLDQISLWAAERNINLGQTELVNTLLNRLQASAEKIAGQSLDLLLGTFNQVI
DLVLVLVLALYMLLYGGQFWQGLLSLFPKPWGPRIGEALALSFQNFLISQLVLGFIMALMLVPVFGFLRVPFGLLFGLLI
GLLEVIPLVGGVIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKDRVIAPRLMGELIGLNPVWILIALLVGAQLGGILGV
IVAIPLSSVVKSLYEIARSADLAAEDELGSGVKGSPQGLRPSSANGEPRRDPTLPKPETQQI
>Mature_382_residues
MNRFSPLQRLLLTWILIVISGWLAIQVGRLFGHLLTTILTAAVLAFLLNYPVQVLRRYRVSRGLAVTLVFALSVVLLVLV
GIAVVPVLAKQVVQLGARIPEWVDTLQNWLDQISLWAAERNINLGQTELVNTLLNRLQASAEKIAGQSLDLLLGTFNQVI
DLVLVLVLALYMLLYGGQFWQGLLSLFPKPWGPRIGEALALSFQNFLISQLVLGFIMALMLVPVFGFLRVPFGLLFGLLI
GLLEVIPLVGGVIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKDRVIAPRLMGELIGLNPVWILIALLVGAQLGGILGV
IVAIPLSSVVKSLYEIARSADLAAEDELGSGVKGSPQGLRPSSANGEPRRDPTLPKPETQQI

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=330, Percent_Identity=24.8484848484848, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41433; Mature: 41433

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFSPLQRLLLTWILIVISGWLAIQVGRLFGHLLTTILTAAVLAFLLNYPVQVLRRYRV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGLAVTLVFALSVVLLVLVGIAVVPVLAKQVVQLGARIPEWVDTLQNWLDQISLWAAER
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NINLGQTELVNTLLNRLQASAEKIAGQSLDLLLGTFNQVIDLVLVLVLALYMLLYGGQFW
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
QGLLSLFPKPWGPRIGEALALSFQNFLISQLVLGFIMALMLVPVFGFLRVPFGLLFGLLI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLEVIPLVGGVIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKDRVIAPRLMGELIGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVWILIALLVGAQLGGILGVIVAIPLSSVVKSLYEIARSADLAAEDELGSGVKGSPQGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC
PSSANGEPRRDPTLPKPETQQI
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRFSPLQRLLLTWILIVISGWLAIQVGRLFGHLLTTILTAAVLAFLLNYPVQVLRRYRV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGLAVTLVFALSVVLLVLVGIAVVPVLAKQVVQLGARIPEWVDTLQNWLDQISLWAAER
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NINLGQTELVNTLLNRLQASAEKIAGQSLDLLLGTFNQVIDLVLVLVLALYMLLYGGQFW
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
QGLLSLFPKPWGPRIGEALALSFQNFLISQLVLGFIMALMLVPVFGFLRVPFGLLFGLLI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLEVIPLVGGVIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKDRVIAPRLMGELIGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVWILIALLVGAQLGGILGVIVAIPLSSVVKSLYEIARSADLAAEDELGSGVKGSPQGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC
PSSANGEPRRDPTLPKPETQQI
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]