| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608633
Identifier: 86608633
GI number: 86608633
Start: 1195470
End: 1195976
Strand: Direct
Name: 86608633
Synonym: CYB_1157
Alternate gene names: NA
Gene position: 1195470-1195976 (Clockwise)
Preceding gene: 86608630
Following gene: 86608634
Centisome position: 39.24
GC content: 57.79
Gene sequence:
>507_bases ATGCAAGAATTTCGTCCCGCTAACGCGATCAGAAACCTTCGCTTCATACTCCTGGGCTTGTGGATCTTGAGCCTGCTCGT TCTCCTCATCCAAAACTGGGGATCCCCGGCAAGGGTTGTGGTGGGTGGGCAATCGGGATCCCCGCTTCCTCTATCGTTGG TGCTATTGGCCTCTTATGGGGCAGGGATGGGGCTGGGATTTTTGTATGTAGGCTCCTGGCGATTGCACGACCGGGTGTTC CAGCGACAGGCCATCCGTAAGTTAACTCAGTTGAGCGACCGAGTTCGCTTTTTGGAAGCCCAGCTGATTCCCCCCGACCA CTATTTGCCCCAAGATCTGCCGGAGTACGAGCCGGATCCCCAAGCAGGCCGCTATTCCTATTCCAATATCCCGCCGGAAC GCATTCGCGATCCCGCTCCTGAGGACGACGATGCGGCAGCAGCTCCCAACTGGCGGATTGTCCAGCGGCCCTACGCCGAC GAGGAGGAGGAAGGATGGGATTCCTAA
Upstream 100 bases:
>100_bases GGCTGTTGAGAACAACTCCGCTTGAGCTTCCAGCGTCTTTGCTGCCAGGCCAGTGGAGAAAGGGAAGAATGGTAGCCTAA TAAAGGGTAGGGTTGAGGCC
Downstream 100 bases:
>100_bases ACTGGTGGAAATCGTCTGCCGCTCCTGCGTCTGAGCCCGACCCCCGCCCTGAACCGCGGGGACAGAACAACTATCTGCTC ATCGTCCTAGACAGTTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQEFRPANAIRNLRFILLGLWILSLLVLLIQNWGSPARVVVGGQSGSPLPLSLVLLASYGAGMGLGFLYVGSWRLHDRVF QRQAIRKLTQLSDRVRFLEAQLIPPDHYLPQDLPEYEPDPQAGRYSYSNIPPERIRDPAPEDDDAAAAPNWRIVQRPYAD EEEEGWDS
Sequences:
>Translated_168_residues MQEFRPANAIRNLRFILLGLWILSLLVLLIQNWGSPARVVVGGQSGSPLPLSLVLLASYGAGMGLGFLYVGSWRLHDRVF QRQAIRKLTQLSDRVRFLEAQLIPPDHYLPQDLPEYEPDPQAGRYSYSNIPPERIRDPAPEDDDAAAAPNWRIVQRPYAD EEEEGWDS >Mature_168_residues MQEFRPANAIRNLRFILLGLWILSLLVLLIQNWGSPARVVVGGQSGSPLPLSLVLLASYGAGMGLGFLYVGSWRLHDRVF QRQAIRKLTQLSDRVRFLEAQLIPPDHYLPQDLPEYEPDPQAGRYSYSNIPPERIRDPAPEDDDAAAAPNWRIVQRPYAD EEEEGWDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19050; Mature: 19050
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFRPANAIRNLRFILLGLWILSLLVLLIQNWGSPARVVVGGQSGSPLPLSLVLLASYG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHC AGMGLGFLYVGSWRLHDRVFQRQAIRKLTQLSDRVRFLEAQLIPPDHYLPQDLPEYEPDP CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QAGRYSYSNIPPERIRDPAPEDDDAAAAPNWRIVQRPYADEEEEGWDS CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MQEFRPANAIRNLRFILLGLWILSLLVLLIQNWGSPARVVVGGQSGSPLPLSLVLLASYG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHC AGMGLGFLYVGSWRLHDRVFQRQAIRKLTQLSDRVRFLEAQLIPPDHYLPQDLPEYEPDP CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QAGRYSYSNIPPERIRDPAPEDDDAAAAPNWRIVQRPYADEEEEGWDS CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA