Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608634

Identifier: 86608634

GI number: 86608634

Start: 1195964

End: 1196860

Strand: Direct

Name: 86608634

Synonym: CYB_1158

Alternate gene names: NA

Gene position: 1195964-1196860 (Clockwise)

Preceding gene: 86608633

Following gene: 86608639

Centisome position: 39.25

GC content: 58.64

Gene sequence:

>897_bases
ATGGGATTCCTAAACTGGTGGAAATCGTCTGCCGCTCCTGCGTCTGAGCCCGACCCCCGCCCTGAACCGCGGGGACAGAA
CAACTATCTGCTCATCGTCCTAGACAGTTGCCGCTTCGACAGCCTGCTGGCGGCCAACCCCAAGCACTTGCTGAAGTTGG
GCCCTCTGGAAAAGCGCTGGAGCTACGCTTCCTGGACGGCCCCTGCCCATTACAACCTGCTCATGGGCCTGCTGCCCCAC
ACCAGCCCCATCCACGTTTTTGCGTCCGAGCACTACAAGCAAGATTATCTGCGCTACAACGAGCGGCTCGGCACCCGGCA
ACCCATTGAGTTCAAGCATCTGCTGCCTCATCTCTATTTGCCGACGCTGCTGAAGCATCAACTGGGCTACACCACCCACG
CCATGGTCTCCATGCCGGTGCTCAACCCCAGCACGCTGCTGAATCGGGATTTCGATTCCTACCGCCTCATGCCCCAGCAC
AACGATATGGCGGCCATGGTGGAACAGTTGCGCTTCGAGCCGGATCGCCCCAGCTTTTACCTGTTAAACGTGGGCGAAAC
TCACTATCCCTACGCGCTGCCCGATGAGGATCCCAGCTTGTGGCCCCGCATCTCGGGGGTGAATGGGGTGTTGAAGCGGC
TGGATGAAGGAGAAGAGGACGGGATCCCCTTTTTCGATTCGGCCCAGTTGGAAGAGCTACGGCAGCGACAGATCCAGGCG
GTGCGCTACCTGGATGGGATCTTTGAACAGCTGTTCGACCTGGTTCCCAAAAACACCTACATCACGGTTACAGCCGATCA
CGGCGAACTGTTTGGGGAGGGAGGCTACTTCGGCCACGGCCCTATCCACCACGAAAAAGTGCTGGAGGTGCCTTTTATCG
AGGGCAAGATTCGCTAG

Upstream 100 bases:

>100_bases
CGGAACGCATTCGCGATCCCGCTCCTGAGGACGACGATGCGGCAGCAGCTCCCAACTGGCGGATTGTCCAGCGGCCCTAC
GCCGACGAGGAGGAGGAAGG

Downstream 100 bases:

>100_bases
GATGAGGCCCTCACCCCCAGCCCCTCTCCCTGAGGACAAGGGTGGCCATCGATAGCCCAGCAACTGGGCTTACCAGGATT
GAGCCTCTGTTTGCCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MGFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRWSYASWTAPAHYNLLMGLLPH
TSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQH
NDMAAMVEQLRFEPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA
VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR

Sequences:

>Translated_298_residues
MGFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRWSYASWTAPAHYNLLMGLLPH
TSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQH
NDMAAMVEQLRFEPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA
VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
>Mature_297_residues
GFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRWSYASWTAPAHYNLLMGLLPHT
SPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQHN
DMAAMVEQLRFEPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQAV
RYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34358; Mature: 34226

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRW
CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHCCCCHHHHC
SYASWTAPAHYNLLMGLLPHTSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYL
CCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
PTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQHNDMAAMVEQLRFEPDRPSFY
HHHHHHHHCCCEEHEEEECCCCHHHHHHCCCHHEECCCCCCCHHHHHHHHHCCCCCCCEE
LLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
GFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRW
CCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHCCCCHHHHC
SYASWTAPAHYNLLMGLLPHTSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYL
CCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
PTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQHNDMAAMVEQLRFEPDRPSFY
HHHHHHHHCCCEEHEEEECCCCHHHHHHCCCHHEECCCCCCCHHHHHHHHHCCCCCCCEE
LLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA