| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608634
Identifier: 86608634
GI number: 86608634
Start: 1195964
End: 1196860
Strand: Direct
Name: 86608634
Synonym: CYB_1158
Alternate gene names: NA
Gene position: 1195964-1196860 (Clockwise)
Preceding gene: 86608633
Following gene: 86608639
Centisome position: 39.25
GC content: 58.64
Gene sequence:
>897_bases ATGGGATTCCTAAACTGGTGGAAATCGTCTGCCGCTCCTGCGTCTGAGCCCGACCCCCGCCCTGAACCGCGGGGACAGAA CAACTATCTGCTCATCGTCCTAGACAGTTGCCGCTTCGACAGCCTGCTGGCGGCCAACCCCAAGCACTTGCTGAAGTTGG GCCCTCTGGAAAAGCGCTGGAGCTACGCTTCCTGGACGGCCCCTGCCCATTACAACCTGCTCATGGGCCTGCTGCCCCAC ACCAGCCCCATCCACGTTTTTGCGTCCGAGCACTACAAGCAAGATTATCTGCGCTACAACGAGCGGCTCGGCACCCGGCA ACCCATTGAGTTCAAGCATCTGCTGCCTCATCTCTATTTGCCGACGCTGCTGAAGCATCAACTGGGCTACACCACCCACG CCATGGTCTCCATGCCGGTGCTCAACCCCAGCACGCTGCTGAATCGGGATTTCGATTCCTACCGCCTCATGCCCCAGCAC AACGATATGGCGGCCATGGTGGAACAGTTGCGCTTCGAGCCGGATCGCCCCAGCTTTTACCTGTTAAACGTGGGCGAAAC TCACTATCCCTACGCGCTGCCCGATGAGGATCCCAGCTTGTGGCCCCGCATCTCGGGGGTGAATGGGGTGTTGAAGCGGC TGGATGAAGGAGAAGAGGACGGGATCCCCTTTTTCGATTCGGCCCAGTTGGAAGAGCTACGGCAGCGACAGATCCAGGCG GTGCGCTACCTGGATGGGATCTTTGAACAGCTGTTCGACCTGGTTCCCAAAAACACCTACATCACGGTTACAGCCGATCA CGGCGAACTGTTTGGGGAGGGAGGCTACTTCGGCCACGGCCCTATCCACCACGAAAAAGTGCTGGAGGTGCCTTTTATCG AGGGCAAGATTCGCTAG
Upstream 100 bases:
>100_bases CGGAACGCATTCGCGATCCCGCTCCTGAGGACGACGATGCGGCAGCAGCTCCCAACTGGCGGATTGTCCAGCGGCCCTAC GCCGACGAGGAGGAGGAAGG
Downstream 100 bases:
>100_bases GATGAGGCCCTCACCCCCAGCCCCTCTCCCTGAGGACAAGGGTGGCCATCGATAGCCCAGCAACTGGGCTTACCAGGATT GAGCCTCTGTTTGCCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MGFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRWSYASWTAPAHYNLLMGLLPH TSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQH NDMAAMVEQLRFEPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
Sequences:
>Translated_298_residues MGFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRWSYASWTAPAHYNLLMGLLPH TSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQH NDMAAMVEQLRFEPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR >Mature_297_residues GFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRWSYASWTAPAHYNLLMGLLPHT SPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQHN DMAAMVEQLRFEPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQAV RYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34358; Mature: 34226
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRW CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHCCCCHHHHC SYASWTAPAHYNLLMGLLPHTSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYL CCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH PTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQHNDMAAMVEQLRFEPDRPSFY HHHHHHHHCCCEEHEEEECCCCHHHHHHCCCHHEECCCCCCCHHHHHHHHHCCCCCCCEE LLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR HHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure GFLNWWKSSAAPASEPDPRPEPRGQNNYLLIVLDSCRFDSLLAANPKHLLKLGPLEKRW CCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHCCCCHHHHC SYASWTAPAHYNLLMGLLPHTSPIHVFASEHYKQDYLRYNERLGTRQPIEFKHLLPHLYL CCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH PTLLKHQLGYTTHAMVSMPVLNPSTLLNRDFDSYRLMPQHNDMAAMVEQLRFEPDRPSFY HHHHHHHHCCCEEHEEEECCCCHHHHHHCCCHHEECCCCCCCHHHHHHHHHCCCCCCCEE LLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEDGIPFFDSAQLEELRQRQIQA EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VRYLDGIFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR HHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA