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The map label for this gene is yjcF [C]

Identifier: 86608622

GI number: 86608622

Start: 1181165

End: 1182199

Strand: Direct

Name: yjcF [C]

Synonym: CYB_1144

Alternate gene names: 86608622

Gene position: 1181165-1182199 (Clockwise)

Preceding gene: 86608621

Following gene: 86608623

Centisome position: 38.77

GC content: 64.73

Gene sequence:

>1035_bases
ATGGCAACCGGGAGCGCCCCTGCCCACGCCTTGGTGTTGGGAGGTATCGAGGGGGCGCGGAGACGACTCGCCCATAGCGA
TGAAGCCGTGCGCTTAGCCACGCTATCCCAGTTGCTGCAGTACGGGTCGGCGGGCCTGGCCGAACTCATTGCAGCCCTCG
CCGGCAACAGCTCTTGGGCGGTGCGGCTGGAAGCTTGGCGGCTGTTGTCTCAGCTTGGCCAGCCGGAGGCAGAACAGGCC
TGTTGCACCTACAGCCCCTTTCGCCCGGTGGGGGGAGCGCAAGGGGTGATCGTGGCCTATCGGCGTGGGGAGCGGAACTT
TGCCTACGCCGACCTGGAGGGAGTGGATCTGCAAGAGGCGCGGCTAGGGGGCGTTAACCTCTACGAAGCCAATTTGAGAA
AGGCCAACCTGCGCCTTTGCAACTTCAACGGCGCCCACCTGCGCCGGGCGGATCTGCGCCAGGCCAATTTGCAAGAGGCC
AAGCTAAGCGGCGCCGTCCTCGAAGGAGCCGATCTGCGGGGATCCGACCTCAGAGGGGCCAAGGTCAGCGGCACCAGCCT
GCGGGGATCCCGGCTTTCGGAAGAGACCCACCTGGAAGAACGGGTGCGCCACATCTGGCAGTTGCAGAACTGGGGGGGAC
AGGGACAGGATTTCTCCGGCCAAGACCTGAGCAAAGCCGATCTGCGGGAACTGGTGCTCTGTCAGATCCGGCTGAGGGGA
GCGGATCTGAACCGGGCCGATCTGCGCGGATCCAACCTAGAGGGAGCGGACTTGGGGGGAGCCAACCTACAGCGAGCGGA
CTTGCGGGGGGCCAACTTGCAAAATGCCGACCTGGAAGGGGCCAATCTCAGCGGCGCCGAGCTGCGTCAGGCCCAGTTTC
AGGGGGCTAACCTGCGGCGGGCCGATGTCAGCGGGGCCAACCTAACCCAAGCCAACCTGGAAGGAGCTCAGATCGAAGGG
TTAAAGCACAGCGGATCCCGGATTGCCGGCCTGATCTTTCCCGACGGCACCCCGATCAAGCCCTGGTGGTGGTAA

Upstream 100 bases:

>100_bases
GGTTCATCGGGATCTGCCCATGGTAGGTAAGCCTCAGCCGGCTGTCAGAACTGGCCAGGGATCCCGGCCCCAACCTTGGG
ATCTGGTGTTGGGGGGGCAA

Downstream 100 bases:

>100_bases
CAGGTGCCTACCGCTCACCCAATGAGCCAAATCCAAAGGAATCCCAAGATCCCCCGGCAATTGGGCAAACCCGGATCACC
ATAGGAGTAGAGATACCTAT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MATGSAPAHALVLGGIEGARRRLAHSDEAVRLATLSQLLQYGSAGLAELIAALAGNSSWAVRLEAWRLLSQLGQPEAEQA
CCTYSPFRPVGGAQGVIVAYRRGERNFAYADLEGVDLQEARLGGVNLYEANLRKANLRLCNFNGAHLRRADLRQANLQEA
KLSGAVLEGADLRGSDLRGAKVSGTSLRGSRLSEETHLEERVRHIWQLQNWGGQGQDFSGQDLSKADLRELVLCQIRLRG
ADLNRADLRGSNLEGADLGGANLQRADLRGANLQNADLEGANLSGAELRQAQFQGANLRRADVSGANLTQANLEGAQIEG
LKHSGSRIAGLIFPDGTPIKPWWW

Sequences:

>Translated_344_residues
MATGSAPAHALVLGGIEGARRRLAHSDEAVRLATLSQLLQYGSAGLAELIAALAGNSSWAVRLEAWRLLSQLGQPEAEQA
CCTYSPFRPVGGAQGVIVAYRRGERNFAYADLEGVDLQEARLGGVNLYEANLRKANLRLCNFNGAHLRRADLRQANLQEA
KLSGAVLEGADLRGSDLRGAKVSGTSLRGSRLSEETHLEERVRHIWQLQNWGGQGQDFSGQDLSKADLRELVLCQIRLRG
ADLNRADLRGSNLEGADLGGANLQRADLRGANLQNADLEGANLSGAELRQAQFQGANLRRADVSGANLTQANLEGAQIEG
LKHSGSRIAGLIFPDGTPIKPWWW
>Mature_343_residues
ATGSAPAHALVLGGIEGARRRLAHSDEAVRLATLSQLLQYGSAGLAELIAALAGNSSWAVRLEAWRLLSQLGQPEAEQAC
CTYSPFRPVGGAQGVIVAYRRGERNFAYADLEGVDLQEARLGGVNLYEANLRKANLRLCNFNGAHLRRADLRQANLQEAK
LSGAVLEGADLRGSDLRGAKVSGTSLRGSRLSEETHLEERVRHIWQLQNWGGQGQDFSGQDLSKADLRELVLCQIRLRGA
DLNRADLRGSNLEGADLGGANLQRADLRGANLQNADLEGANLSGAELRQAQFQGANLRRADVSGANLTQANLEGAQIEGL
KHSGSRIAGLIFPDGTPIKPWWW

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=177, Percent_Identity=32.7683615819209, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI221377802, Length=216, Percent_Identity=29.6296296296296, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 37024; Mature: 36893

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGSAPAHALVLGGIEGARRRLAHSDEAVRLATLSQLLQYGSAGLAELIAALAGNSSWA
CCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE
VRLEAWRLLSQLGQPEAEQACCTYSPFRPVGGAQGVIVAYRRGERNFAYADLEGVDLQEA
EEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHH
RLGGVNLYEANLRKANLRLCNFNGAHLRRADLRQANLQEAKLSGAVLEGADLRGSDLRGA
HCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
KVSGTSLRGSRLSEETHLEERVRHIWQLQNWGGQGQDFSGQDLSKADLRELVLCQIRLRG
EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEECC
ADLNRADLRGSNLEGADLGGANLQRADLRGANLQNADLEGANLSGAELRQAQFQGANLRR
CCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE
ADVSGANLTQANLEGAQIEGLKHSGSRIAGLIFPDGTPIKPWWW
ECCCCCCCEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
ATGSAPAHALVLGGIEGARRRLAHSDEAVRLATLSQLLQYGSAGLAELIAALAGNSSWA
CCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE
VRLEAWRLLSQLGQPEAEQACCTYSPFRPVGGAQGVIVAYRRGERNFAYADLEGVDLQEA
EEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHH
RLGGVNLYEANLRKANLRLCNFNGAHLRRADLRQANLQEAKLSGAVLEGADLRGSDLRGA
HCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
KVSGTSLRGSRLSEETHLEERVRHIWQLQNWGGQGQDFSGQDLSKADLRELVLCQIRLRG
EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEECC
ADLNRADLRGSNLEGADLGGANLQRADLRGANLQNADLEGANLSGAELRQAQFQGANLRR
CCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE
ADVSGANLTQANLEGAQIEGLKHSGSRIAGLIFPDGTPIKPWWW
ECCCCCCCEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]