Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86608623

Identifier: 86608623

GI number: 86608623

Start: 1182311

End: 1184686

Strand: Direct

Name: 86608623

Synonym: CYB_1145

Alternate gene names: NA

Gene position: 1182311-1184686 (Clockwise)

Preceding gene: 86608622

Following gene: 86608624

Centisome position: 38.81

GC content: 59.89

Gene sequence:

>2376_bases
ATGGTTCTGGCAGAACAGCTCTCGACAAAACCGCTCACCGCCGACGAGCTTCGCAAAATGGATGCCTACTGGCGGGCCGC
CAACTATCTGTCGGTCGGGCAAATCTATTTGATGGACAACCCGCTGCTGCGAGAACCCCTAAAACTGGAACATGTGAAGC
CACGCCTGCTGGGGCACTGGGGCACCACACCCGGGTTGAACTTCATCTACGTGCATCTCAACCGCATCATCAAACGGGAA
AACCTCAACATCCTCTACATCACCGGCCCCGGCCACGGTGGCCCTGCTCTGGTGGCCAACACCTACTTGGAAGGCACCTA
CAGCGAGGTGTATCCCAACATCGGCCAAGACGCCGAAGGCATGCGCAAGCTCTTCAAGCAATTCTCCTTCCCCGGCGGCG
TGCCCAGCCACGTGGCTCCGGAAACCCCTGGCTCCATCCACGAGGGGGGAGAACTGGGCTATGCCCTGGCCCACGCCTTT
GGGGCTGCCTTTGATAACCCCGATCTGCTGGTGGCCTGTGTGGTGGGGGATGGAGAAGCGGAAACCGGCCCCTTGGCCGC
TTCCTGGCATTCCAACAAGTTCCTCAACCCCATCCACGACGGAGCAGTGCTGCCGATTCTGCACCTGAACGGCTACAAGA
TCGCCAATCCCACCGTTTTGGCCCGCCTCAGCCGTGACGAGCTGCAAAGCCTGTTTGTGGGCTACGGCTACAAGCCCTAC
TTCGTAGAAGGCTGCGAGCCGGCAGAGATGCACCAGTTGATGGCCGCCACTTTGGACACGGTGATCCACGAGATCCAAGA
AATCCAGCAGCATGCCCGCAGCAAAGGGGATCCCACTCGTCCCCAATGGCCGATGATCATCCTGCGCACCCCCAAAGGCT
GGACCGGCCCCAAAGAGGTGGACGGCAAAAAGGTGGAAGATTTCTGGCGCTCCCACCAAGTGCCCCTGGCGGATCTGGCC
AAAAAACCGGAGCACCTCAAGGCTCTGGAGGACTGGATGCGCAGCTACAAGCCGGAAGAACTCTTCGATGAAAATGGCCG
TCTGCTGCCGGAGCTGCAAGAGCTGGCCCCCAAAGGGGAAAAACGCATGGGGGCTTTGCCCCACGCCAACGGCGGCCTGC
TGACGCGGGAGCTGAAAATGCCGGATTTCCGTCGCTACGCCGTGCCTGTCCCCCGCCCCGGCACCACCGAAGCCGAAGCC
ACCCGAGTGCTGGGGCAATTTCTGCGGGATGTGATGAAGCTCAACCCCCACAACTTCCGCCTCTTTGGCCCCGATGAAAC
CGCTTCCAACCGCTTGGATGCTGTGTTTGAGGCCAGCGACCGCACCTGGGTAGCTCCCATCTACGATTGCGACGAGCACC
TCTCCCCAGATGGACGGGTGATGGAGATCCTCAGCGAGCACGTCTGTCAGGGCTGGCTAGAAGGCTACCTGTTGACCGGG
CGACACGGGTTCTTTTCCTGTTACGAAGCCTTCATCCACCTGGTGGACTCGATGTTCAACCAACACGCCAAATGGTTGAA
AACCACCCGGCACATTCCTTGGCGGCGGCCCATTCCTTCCCTCAACTACCTGCTGACTTCCCATGTGTGGCGGCAGGATC
ACAACGGCTTCAGCCACCAGGATCCCGGCTTTTTGGATCACGTGGTCAACAAAAAGGCCGAAATCATCCGCGTCTACCTG
CCCCCGGATACCAATACTTTGCTCTCGGTGGCCGACCACTGTCTGCGCAGTCGCCACTACGTGAACGTGATCGTGGCAGG
CAAACAGCCGGCCCTGCAGTACCTGGACATGGATGCGGCCATCAAACACTGCACCCAGGGCTTGGGAATCTGGGAATGGG
CCAGCAACGATCAGGGTTCAGAGCCGGATGTGGTGATGGCCTGCTGTGGCGATGTGCCGACGATGGAAACCCTGGCGGCG
GTGGACTTTTTGCGGCAGCACCTGCCGGAGATCAAGATCCGGGTGGTGAACGTGGTGAACCTAATGAAGCTGCAGCCGCC
CAGCGAACACCCCCACGGCATTAGCGACAAGGAGTTTGTCAGTATCTTCACCCCCGACAAGCCCATCGTGTTTGCCTTCC
ACGGCTATCCTTGGCTCATCCACCGCCTCACCTACCGCCGTCCCAACCACCACAACCTGCACGTGCGCGGCTACAAGGAG
GAAGGCACCACCACCACCCCCTTCGACATGTGCGTTCTCAACCAGGTGGATCGCTTTAACTTGGCCAACGACGTCTTGGA
GCGGGTGGATCGCTTCAAGTACCGGCGGGATCACGTCCAGCAGCTTATCCGGGACAAGCTGGTGGAGCACAAGCAGTACA
TCTGCAAACACGGGGAAGATCTGCCGGAGGTGCGCAACTGGAAGTGGCCCTATTGA

Upstream 100 bases:

>100_bases
CGCTCACCCAATGAGCCAAATCCAAAGGAATCCCAAGATCCCCCGGCAATTGGGCAAACCCGGATCACCATAGGAGTAGA
GATACCTATGGGGTACAGCT

Downstream 100 bases:

>100_bases
AGGGATCCCCACTCAACTAACTTTCGCCTCTGAGCTCTGGCAGGATAGAGTTTTTGAGGGTTTGGAGGTTGAGAGTGTGA
GGGGTTCAGAAAGGGTGGAT

Product: phosphoketolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MVLAEQLSTKPLTADELRKMDAYWRAANYLSVGQIYLMDNPLLREPLKLEHVKPRLLGHWGTTPGLNFIYVHLNRIIKRE
NLNILYITGPGHGGPALVANTYLEGTYSEVYPNIGQDAEGMRKLFKQFSFPGGVPSHVAPETPGSIHEGGELGYALAHAF
GAAFDNPDLLVACVVGDGEAETGPLAASWHSNKFLNPIHDGAVLPILHLNGYKIANPTVLARLSRDELQSLFVGYGYKPY
FVEGCEPAEMHQLMAATLDTVIHEIQEIQQHARSKGDPTRPQWPMIILRTPKGWTGPKEVDGKKVEDFWRSHQVPLADLA
KKPEHLKALEDWMRSYKPEELFDENGRLLPELQELAPKGEKRMGALPHANGGLLTRELKMPDFRRYAVPVPRPGTTEAEA
TRVLGQFLRDVMKLNPHNFRLFGPDETASNRLDAVFEASDRTWVAPIYDCDEHLSPDGRVMEILSEHVCQGWLEGYLLTG
RHGFFSCYEAFIHLVDSMFNQHAKWLKTTRHIPWRRPIPSLNYLLTSHVWRQDHNGFSHQDPGFLDHVVNKKAEIIRVYL
PPDTNTLLSVADHCLRSRHYVNVIVAGKQPALQYLDMDAAIKHCTQGLGIWEWASNDQGSEPDVVMACCGDVPTMETLAA
VDFLRQHLPEIKIRVVNVVNLMKLQPPSEHPHGISDKEFVSIFTPDKPIVFAFHGYPWLIHRLTYRRPNHHNLHVRGYKE
EGTTTTPFDMCVLNQVDRFNLANDVLERVDRFKYRRDHVQQLIRDKLVEHKQYICKHGEDLPEVRNWKWPY

Sequences:

>Translated_791_residues
MVLAEQLSTKPLTADELRKMDAYWRAANYLSVGQIYLMDNPLLREPLKLEHVKPRLLGHWGTTPGLNFIYVHLNRIIKRE
NLNILYITGPGHGGPALVANTYLEGTYSEVYPNIGQDAEGMRKLFKQFSFPGGVPSHVAPETPGSIHEGGELGYALAHAF
GAAFDNPDLLVACVVGDGEAETGPLAASWHSNKFLNPIHDGAVLPILHLNGYKIANPTVLARLSRDELQSLFVGYGYKPY
FVEGCEPAEMHQLMAATLDTVIHEIQEIQQHARSKGDPTRPQWPMIILRTPKGWTGPKEVDGKKVEDFWRSHQVPLADLA
KKPEHLKALEDWMRSYKPEELFDENGRLLPELQELAPKGEKRMGALPHANGGLLTRELKMPDFRRYAVPVPRPGTTEAEA
TRVLGQFLRDVMKLNPHNFRLFGPDETASNRLDAVFEASDRTWVAPIYDCDEHLSPDGRVMEILSEHVCQGWLEGYLLTG
RHGFFSCYEAFIHLVDSMFNQHAKWLKTTRHIPWRRPIPSLNYLLTSHVWRQDHNGFSHQDPGFLDHVVNKKAEIIRVYL
PPDTNTLLSVADHCLRSRHYVNVIVAGKQPALQYLDMDAAIKHCTQGLGIWEWASNDQGSEPDVVMACCGDVPTMETLAA
VDFLRQHLPEIKIRVVNVVNLMKLQPPSEHPHGISDKEFVSIFTPDKPIVFAFHGYPWLIHRLTYRRPNHHNLHVRGYKE
EGTTTTPFDMCVLNQVDRFNLANDVLERVDRFKYRRDHVQQLIRDKLVEHKQYICKHGEDLPEVRNWKWPY
>Mature_791_residues
MVLAEQLSTKPLTADELRKMDAYWRAANYLSVGQIYLMDNPLLREPLKLEHVKPRLLGHWGTTPGLNFIYVHLNRIIKRE
NLNILYITGPGHGGPALVANTYLEGTYSEVYPNIGQDAEGMRKLFKQFSFPGGVPSHVAPETPGSIHEGGELGYALAHAF
GAAFDNPDLLVACVVGDGEAETGPLAASWHSNKFLNPIHDGAVLPILHLNGYKIANPTVLARLSRDELQSLFVGYGYKPY
FVEGCEPAEMHQLMAATLDTVIHEIQEIQQHARSKGDPTRPQWPMIILRTPKGWTGPKEVDGKKVEDFWRSHQVPLADLA
KKPEHLKALEDWMRSYKPEELFDENGRLLPELQELAPKGEKRMGALPHANGGLLTRELKMPDFRRYAVPVPRPGTTEAEA
TRVLGQFLRDVMKLNPHNFRLFGPDETASNRLDAVFEASDRTWVAPIYDCDEHLSPDGRVMEILSEHVCQGWLEGYLLTG
RHGFFSCYEAFIHLVDSMFNQHAKWLKTTRHIPWRRPIPSLNYLLTSHVWRQDHNGFSHQDPGFLDHVVNKKAEIIRVYL
PPDTNTLLSVADHCLRSRHYVNVIVAGKQPALQYLDMDAAIKHCTQGLGIWEWASNDQGSEPDVVMACCGDVPTMETLAA
VDFLRQHLPEIKIRVVNVVNLMKLQPPSEHPHGISDKEFVSIFTPDKPIVFAFHGYPWLIHRLTYRRPNHHNLHVRGYKE
EGTTTTPFDMCVLNQVDRFNLANDVLERVDRFKYRRDHVQQLIRDKLVEHKQYICKHGEDLPEVRNWKWPY

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 90196; Mature: 90196

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLAEQLSTKPLTADELRKMDAYWRAANYLSVGQIYLMDNPLLREPLKLEHVKPRLLGHW
CCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEECEEEEECCCHHCCCCHHHCCCHHHHCCC
GTTPGLNFIYVHLNRIIKRENLNILYITGPGHGGPALVANTYLEGTYSEVYPNIGQDAEG
CCCCCCEEEEEHHHHHHHHCCCEEEEEECCCCCCCHHEEHHHHCCCHHHHCCCCCCCHHH
MRKLFKQFSFPGGVPSHVAPETPGSIHEGGELGYALAHAFGAAFDNPDLLVACVVGDGEA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
ETGPLAASWHSNKFLNPIHDGAVLPILHLNGYKIANPTVLARLSRDELQSLFVGYGYKPY
CCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEECCCHHEECCCHHHHHHHHHCCCCCCE
FVEGCEPAEMHQLMAATLDTVIHEIQEIQQHARSKGDPTRPQWPMIILRTPKGWTGPKEV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC
DGKKVEDFWRSHQVPLADLAKKPEHLKALEDWMRSYKPEELFDENGRLLPELQELAPKGE
CCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCCC
KRMGALPHANGGLLTRELKMPDFRRYAVPVPRPGTTEAEATRVLGQFLRDVMKLNPHNFR
HHCCCCCCCCCCEEEEECCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
LFGPDETASNRLDAVFEASDRTWVAPIYDCDEHLSPDGRVMEILSEHVCQGWLEGYLLTG
EECCCCCCCCHHHHHEECCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCEEEEC
RHGFFSCYEAFIHLVDSMFNQHAKWLKTTRHIPWRRPIPSLNYLLTSHVWRQDHNGFSHQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
DPGFLDHVVNKKAEIIRVYLPPDTNTLLSVADHCLRSRHYVNVIVAGKQPALQYLDMDAA
CCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH
IKHCTQGLGIWEWASNDQGSEPDVVMACCGDVPTMETLAAVDFLRQHLPEIKIRVVNVVN
HHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHEEEHHHHHH
LMKLQPPSEHPHGISDKEFVSIFTPDKPIVFAFHGYPWLIHRLTYRRPNHHNLHVRGYKE
HHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECC
EGTTTTPFDMCVLNQVDRFNLANDVLERVDRFKYRRDHVQQLIRDKLVEHKQYICKHGED
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPEVRNWKWPY
CCHHCCCCCCC
>Mature Secondary Structure
MVLAEQLSTKPLTADELRKMDAYWRAANYLSVGQIYLMDNPLLREPLKLEHVKPRLLGHW
CCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEECEEEEECCCHHCCCCHHHCCCHHHHCCC
GTTPGLNFIYVHLNRIIKRENLNILYITGPGHGGPALVANTYLEGTYSEVYPNIGQDAEG
CCCCCCEEEEEHHHHHHHHCCCEEEEEECCCCCCCHHEEHHHHCCCHHHHCCCCCCCHHH
MRKLFKQFSFPGGVPSHVAPETPGSIHEGGELGYALAHAFGAAFDNPDLLVACVVGDGEA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
ETGPLAASWHSNKFLNPIHDGAVLPILHLNGYKIANPTVLARLSRDELQSLFVGYGYKPY
CCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEECCCHHEECCCHHHHHHHHHCCCCCCE
FVEGCEPAEMHQLMAATLDTVIHEIQEIQQHARSKGDPTRPQWPMIILRTPKGWTGPKEV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC
DGKKVEDFWRSHQVPLADLAKKPEHLKALEDWMRSYKPEELFDENGRLLPELQELAPKGE
CCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCCC
KRMGALPHANGGLLTRELKMPDFRRYAVPVPRPGTTEAEATRVLGQFLRDVMKLNPHNFR
HHCCCCCCCCCCEEEEECCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
LFGPDETASNRLDAVFEASDRTWVAPIYDCDEHLSPDGRVMEILSEHVCQGWLEGYLLTG
EECCCCCCCCHHHHHEECCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCEEEEC
RHGFFSCYEAFIHLVDSMFNQHAKWLKTTRHIPWRRPIPSLNYLLTSHVWRQDHNGFSHQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
DPGFLDHVVNKKAEIIRVYLPPDTNTLLSVADHCLRSRHYVNVIVAGKQPALQYLDMDAA
CCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH
IKHCTQGLGIWEWASNDQGSEPDVVMACCGDVPTMETLAAVDFLRQHLPEIKIRVVNVVN
HHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHEEEHHHHHH
LMKLQPPSEHPHGISDKEFVSIFTPDKPIVFAFHGYPWLIHRLTYRRPNHHNLHVRGYKE
HHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEECC
EGTTTTPFDMCVLNQVDRFNLANDVLERVDRFKYRRDHVQQLIRDKLVEHKQYICKHGED
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPEVRNWKWPY
CCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]