| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608621
Identifier: 86608621
GI number: 86608621
Start: 1180686
End: 1181060
Strand: Direct
Name: 86608621
Synonym: CYB_1143
Alternate gene names: NA
Gene position: 1180686-1181060 (Clockwise)
Preceding gene: 86608619
Following gene: 86608622
Centisome position: 38.75
GC content: 59.2
Gene sequence:
>375_bases ATGTCTCACTTCACCACCCTGCAAGTGCAAATCAAAGACGCCGATCTCCTGGAAGAGACTCTGAAGGAATTGGGCTACGC TGTGCAGCGGAATGCCAGCCTGCGGGGCTATCTCTGGAACCGCACCCGCGCCGATCTGGTGATCCGGCAAAAGAATGGCT TCGACATCGGGTTTCGTCGCAACGGGGATCACTACGAGCTGGTGGCCGATCTGTGGGGGGCGGGCATCGATCCCAAGACC TTCCTGGAGCCGATTTTGCAGCGCTACGCCCACAAAAGTTTGCTGCGCTCAGCCCGTGAGCAGGGCTATACCATCGAGGC CGAAGAAGTGCTGGAGGATGGCACCATCCGCGTGGTGGTGGGGCGTTGGCTATAA
Upstream 100 bases:
>100_bases TCGCTCGACCCACCGCAGGATGGTTTACATTTCTTCCACCACCCCAAGGGCGCTTTATAGTGAGGATCCGGTCTCCATCG GTCAAAGGATTGGAAGGGCC
Downstream 100 bases:
>100_bases GCCAGGTTCATCGGGATCTGCCCATGGTAGGTAAGCCTCAGCCGGCTGTCAGAACTGGCCAGGGATCCCGGCCCCAACCT TGGGATCTGGTGTTGGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSHFTTLQVQIKDADLLEETLKELGYAVQRNASLRGYLWNRTRADLVIRQKNGFDIGFRRNGDHYELVADLWGAGIDPKT FLEPILQRYAHKSLLRSAREQGYTIEAEEVLEDGTIRVVVGRWL
Sequences:
>Translated_124_residues MSHFTTLQVQIKDADLLEETLKELGYAVQRNASLRGYLWNRTRADLVIRQKNGFDIGFRRNGDHYELVADLWGAGIDPKT FLEPILQRYAHKSLLRSAREQGYTIEAEEVLEDGTIRVVVGRWL >Mature_123_residues SHFTTLQVQIKDADLLEETLKELGYAVQRNASLRGYLWNRTRADLVIRQKNGFDIGFRRNGDHYELVADLWGAGIDPKTF LEPILQRYAHKSLLRSAREQGYTIEAEEVLEDGTIRVVVGRWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14332; Mature: 14201
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFTTLQVQIKDADLLEETLKELGYAVQRNASLRGYLWNRTRADLVIRQKNGFDIGFRR CCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEECEEE NGDHYELVADLWGAGIDPKTFLEPILQRYAHKSLLRSAREQGYTIEAEEVLEDGTIRVVV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCEEEEE GRWL ECCC >Mature Secondary Structure SHFTTLQVQIKDADLLEETLKELGYAVQRNASLRGYLWNRTRADLVIRQKNGFDIGFRR CCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEECEEE NGDHYELVADLWGAGIDPKTFLEPILQRYAHKSLLRSAREQGYTIEAEEVLEDGTIRVVV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCEEEEE GRWL ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA