| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608603
Identifier: 86608603
GI number: 86608603
Start: 1161389
End: 1162006
Strand: Reverse
Name: 86608603
Synonym: CYB_1125
Alternate gene names: NA
Gene position: 1162006-1161389 (Counterclockwise)
Preceding gene: 86608604
Following gene: 86608602
Centisome position: 38.14
GC content: 52.1
Gene sequence:
>618_bases ATGCTGAACATCTCCATTCTTAAAGAAGACGAATCCTATACTTTTCGCTCTTATTTTGAGATGCCCTACGAGCCAGATGA AATCTTGGCTCAGTTCGGCTATCAACTGGAAATTGGGGAGTGGACATGGCCTGTTGCCCCTGCGCCGCCGCAAACCCCAG TTTTGAAAGATCGGATCCGACAATTGTTACCTTTGGTTAGCCTCACCAGCGAAACAGCGCGGCGGGAATTGCTGGTGGCT CCTGTGCTGACCGAAGTGGCTCTCCATTGTCGAGTTCCTTTGCGGCTGGAGTATCCCCTGATGGTCAACAATTGGTTGAA GGGCAGCCTCGATTATCTGTTGCGAGGGAAGAACATCCTGCTGGTGGTTGAAGCCAAAAAGGACGATCTAACGCGGGCCT TTGTGCAAATGGCTGTAGAAATGATTGCCCTGGCGCAGGTGGAGCAGCAGGCTCAGATCTACGGTGCAGTGACGATGGGG TCTATCTGGCAGTTCGGACAAATTCTTGCCCATCAGCAGGTGATCAAACAAGACTTAACGCTGTATCGGGTACCTGAGGA GCTAGAAACCATTGCCGGCATTCTCACTGCCATGGTCAGCAACCCCAGCCCATCGTGA
Upstream 100 bases:
>100_bases AGCCACGGAAATTCCCATTGAAGAAGTGGTGACTACCCTGAAAGAGCGGATTGAAGCAGCCCTAGCTGTGCCGGACTGAG CGTGGCTTCTCCTGAACCCG
Downstream 100 bases:
>100_bases ATTAAAAGCGTGAATTAAAAGTAAGTCATGGATCGAAAAACAGTCTGGTTTGCCCTAAAATTGATGCTGGCTGCTGCCGG GATCAGCACAGCCATCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MLNISILKEDESYTFRSYFEMPYEPDEILAQFGYQLEIGEWTWPVAPAPPQTPVLKDRIRQLLPLVSLTSETARRELLVA PVLTEVALHCRVPLRLEYPLMVNNWLKGSLDYLLRGKNILLVVEAKKDDLTRAFVQMAVEMIALAQVEQQAQIYGAVTMG SIWQFGQILAHQQVIKQDLTLYRVPEELETIAGILTAMVSNPSPS
Sequences:
>Translated_205_residues MLNISILKEDESYTFRSYFEMPYEPDEILAQFGYQLEIGEWTWPVAPAPPQTPVLKDRIRQLLPLVSLTSETARRELLVA PVLTEVALHCRVPLRLEYPLMVNNWLKGSLDYLLRGKNILLVVEAKKDDLTRAFVQMAVEMIALAQVEQQAQIYGAVTMG SIWQFGQILAHQQVIKQDLTLYRVPEELETIAGILTAMVSNPSPS >Mature_205_residues MLNISILKEDESYTFRSYFEMPYEPDEILAQFGYQLEIGEWTWPVAPAPPQTPVLKDRIRQLLPLVSLTSETARRELLVA PVLTEVALHCRVPLRLEYPLMVNNWLKGSLDYLLRGKNILLVVEAKKDDLTRAFVQMAVEMIALAQVEQQAQIYGAVTMG SIWQFGQILAHQQVIKQDLTLYRVPEELETIAGILTAMVSNPSPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23298; Mature: 23298
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNISILKEDESYTFRSYFEMPYEPDEILAQFGYQLEIGEWTWPVAPAPPQTPVLKDRIR CCEEEEEECCCCCHHHHHHCCCCCHHHHHHHCCCEEEECCEECCCCCCCCCCCHHHHHHH QLLPLVSLTSETARRELLVAPVLTEVALHCRVPLRLEYPLMVNNWLKGSLDYLLRGKNIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCEE LVVEAKKDDLTRAFVQMAVEMIALAQVEQQAQIYGAVTMGSIWQFGQILAHQQVIKQDLT EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LYRVPEELETIAGILTAMVSNPSPS EEECCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLNISILKEDESYTFRSYFEMPYEPDEILAQFGYQLEIGEWTWPVAPAPPQTPVLKDRIR CCEEEEEECCCCCHHHHHHCCCCCHHHHHHHCCCEEEECCEECCCCCCCCCCCHHHHHHH QLLPLVSLTSETARRELLVAPVLTEVALHCRVPLRLEYPLMVNNWLKGSLDYLLRGKNIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCEE LVVEAKKDDLTRAFVQMAVEMIALAQVEQQAQIYGAVTMGSIWQFGQILAHQQVIKQDLT EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LYRVPEELETIAGILTAMVSNPSPS EEECCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA