| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608599
Identifier: 86608599
GI number: 86608599
Start: 1159139
End: 1159597
Strand: Direct
Name: 86608599
Synonym: CYB_1121
Alternate gene names: NA
Gene position: 1159139-1159597 (Clockwise)
Preceding gene: 86608597
Following gene: 86608600
Centisome position: 38.05
GC content: 58.39
Gene sequence:
>459_bases ATGGTTTTGACGTTGGCGACTCTGCTGGGCGGCTGGGTTGGCGGAGGGTTGTTGCAGGGATCCCTCTGGGTTGCCGCTCA GCCTACCTTTCAGACAGTGCCGTTGCCGCGCTTACCGGTGGGTGTCGATCAATTGGTTTTTGATCGCCCAGTGGCCCGCT TCAACCCCGACCTGCCGGCAGAGCTGGTGATCCGCAATCGCACCGGTCTGCCTTTGGAATACGGCTTTACCGATCCCCGC CAGAAAGTCTCGGAACTGCCTGCCGGCGAAACGTTGCGCCTGAGCAACCTGTTGATCCCCAATTGCATGGCCATCAACAC GCCGATGTTGGCTCCTGTGGGCTACCAGGTGAGCGTGGATCCCTTGAATGTGATCACCGTAGAGGTGCGGCTGGTCAACG ATGTCTCCGGCGATCATTGCCTCGATCTGCAAGAGACAGGGGCTATTTTTGTGAATTGA
Upstream 100 bases:
>100_bases TTTTTGGGAACAATACAAGCAGGCAAGGGATCCAACTCCCACCAGTCTGGAAGCACATCCTGAGGCGAAAGCCATGAGCT ATGCAGAACGGAGCAAAAGA
Downstream 100 bases:
>100_bases TATCAATAAACTGACATAAATCGATCGGCGATCGGCGGTCACGACACAAGTTAGTTGATCAAAGGGATCCCTTACATCCT CACCTACAGTCATCTTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MVLTLATLLGGWVGGGLLQGSLWVAAQPTFQTVPLPRLPVGVDQLVFDRPVARFNPDLPAELVIRNRTGLPLEYGFTDPR QKVSELPAGETLRLSNLLIPNCMAINTPMLAPVGYQVSVDPLNVITVEVRLVNDVSGDHCLDLQETGAIFVN
Sequences:
>Translated_152_residues MVLTLATLLGGWVGGGLLQGSLWVAAQPTFQTVPLPRLPVGVDQLVFDRPVARFNPDLPAELVIRNRTGLPLEYGFTDPR QKVSELPAGETLRLSNLLIPNCMAINTPMLAPVGYQVSVDPLNVITVEVRLVNDVSGDHCLDLQETGAIFVN >Mature_152_residues MVLTLATLLGGWVGGGLLQGSLWVAAQPTFQTVPLPRLPVGVDQLVFDRPVARFNPDLPAELVIRNRTGLPLEYGFTDPR QKVSELPAGETLRLSNLLIPNCMAINTPMLAPVGYQVSVDPLNVITVEVRLVNDVSGDHCLDLQETGAIFVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16425; Mature: 16425
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLTLATLLGGWVGGGLLQGSLWVAAQPTFQTVPLPRLPVGVDQLVFDRPVARFNPDLPA CEEEEEHHHHHHHCCCEECCEEEEEECCCEECCCCCCCCCCHHHHHHCCCHHHCCCCCCC ELVIRNRTGLPLEYGFTDPRQKVSELPAGETLRLSNLLIPNCMAINTPMLAPVGYQVSVD EEEEECCCCCCEEECCCCHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEEEC PLNVITVEVRLVNDVSGDHCLDLQETGAIFVN CEEEEEEEEEEEECCCCCEEECCCCCCEEEEC >Mature Secondary Structure MVLTLATLLGGWVGGGLLQGSLWVAAQPTFQTVPLPRLPVGVDQLVFDRPVARFNPDLPA CEEEEEHHHHHHHCCCEECCEEEEEECCCEECCCCCCCCCCHHHHHHCCCHHHCCCCCCC ELVIRNRTGLPLEYGFTDPRQKVSELPAGETLRLSNLLIPNCMAINTPMLAPVGYQVSVD EEEEECCCCCCEEECCCCHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEEEC PLNVITVEVRLVNDVSGDHCLDLQETGAIFVN CEEEEEEEEEEEECCCCCEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA