| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608190
Identifier: 86608190
GI number: 86608190
Start: 722133
End: 722546
Strand: Reverse
Name: 86608190
Synonym: CYB_0705
Alternate gene names: NA
Gene position: 722546-722133 (Counterclockwise)
Preceding gene: 86608191
Following gene: 86608189
Centisome position: 23.72
GC content: 58.21
Gene sequence:
>414_bases ATGGCGGTGCAAGAGGAGGTTTTTTTTGAGGGCGGCCCCCACAGTGGCGATTTGGTGTTGAACTCCTTCATTGGGGCTAC ACTTGTCGGCTTGCCTCTGTTTGTGGGGGCACTGGTGCGTAAGCTGTGGGTACACTATCGGATTACCAATCGTCGCATCA CCGTGATTGGGGGATGGGGCGGCAAGGAGCGCTCAGATGTAATCTACGGCGAGATCGCCAAGGTGGTCATGGTGCCACGG GGCTTGGGCGTGTGGGGAGATATGGTGCTCACCCTCAAGGACGGCAGTCGCCTGGAGATGCGGGCCTTGCCTCGCTTCCG CGAGATCTACAACTACATCAATGAGCGGATCGACGAGAAAGCCAAGCAGGTGAGCGGCCCAATTGGCAAAAAGCGCCGCT CTGCCAAGTCCTGA
Upstream 100 bases:
>100_bases GACCCAATCCCGAACCTGCCGTTAGCCCCAGTTGGGGAAAGCTGAGAAATCGTTTAAGATCGTTAACGGCAACACTCTAA ACAACCGGACGGTGCTCTGC
Downstream 100 bases:
>100_bases CCGTGCCTGAGCCTTGGGGATCCCTTCCTGTGGCTGTCCCCACTCTTCCCAGCCGGGATCCCGCTTGGCCTGAGCGCCTG GCCCTGGTGCACGAGTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAVQEEVFFEGGPHSGDLVLNSFIGATLVGLPLFVGALVRKLWVHYRITNRRITVIGGWGGKERSDVIYGEIAKVVMVPR GLGVWGDMVLTLKDGSRLEMRALPRFREIYNYINERIDEKAKQVSGPIGKKRRSAKS
Sequences:
>Translated_137_residues MAVQEEVFFEGGPHSGDLVLNSFIGATLVGLPLFVGALVRKLWVHYRITNRRITVIGGWGGKERSDVIYGEIAKVVMVPR GLGVWGDMVLTLKDGSRLEMRALPRFREIYNYINERIDEKAKQVSGPIGKKRRSAKS >Mature_136_residues AVQEEVFFEGGPHSGDLVLNSFIGATLVGLPLFVGALVRKLWVHYRITNRRITVIGGWGGKERSDVIYGEIAKVVMVPRG LGVWGDMVLTLKDGSRLEMRALPRFREIYNYINERIDEKAKQVSGPIGKKRRSAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15342; Mature: 15211
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQEEVFFEGGPHSGDLVLNSFIGATLVGLPLFVGALVRKLWVHYRITNRRITVIGGWG CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCC GKERSDVIYGEIAKVVMVPRGLGVWGDMVLTLKDGSRLEMRALPRFREIYNYINERIDEK CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHH AKQVSGPIGKKRRSAKS HHHHCCCCCCCCCCCCC >Mature Secondary Structure AVQEEVFFEGGPHSGDLVLNSFIGATLVGLPLFVGALVRKLWVHYRITNRRITVIGGWG CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCC GKERSDVIYGEIAKVVMVPRGLGVWGDMVLTLKDGSRLEMRALPRFREIYNYINERIDEK CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHH AKQVSGPIGKKRRSAKS HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA