| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608189
Identifier: 86608189
GI number: 86608189
Start: 720895
End: 722103
Strand: Reverse
Name: 86608189
Synonym: CYB_0703
Alternate gene names: NA
Gene position: 722103-720895 (Counterclockwise)
Preceding gene: 86608190
Following gene: 86608187
Centisome position: 23.7
GC content: 63.44
Gene sequence:
>1209_bases GTGGCTGTCCCCACTCTTCCCAGCCGGGATCCCGCTTGGCCTGAGCGCCTGGCCCTGGTGCACGAGTACCTGATCTGGCC GGGGGGATCGGAAAAGGTTTTGCAGGAGCTGGTGGCTTTTGCCCCACAGGCCCCCCTTTACGTCAGTCTCTTCTCCGCTC ACACCCTGCCGCCGAGCTGGCAGGAGCTGACAATTCACACCTCCTTTTTGCAAGGCTGGGCCAAGTGGCTGGGGGTGCTG CGCCCTGACTACCATGCCCGCCTCAAGTATCTGCTGCCCTGGATGCCGTTGGCCTATGAGAGCTTCGACCTCTCCGGCTA TGACTGTGTGATCTCCAGCAGCCACGCCTTTGCCAAAGGGATCCTGACGGGAGCCTCTACCCTGCACCTGAGCTACATCC ACAGCCCCACCCGTTACCTCTGGGAGAACCGGGAGCTGTATCTGCAGCGAGAAGGGCTGGGGAGAAGCGGGCCTGTTGGC GCAATTGGCCAATGGCTGCTGCACCGCTTGCGCCAATGGGATTTTCTGGCAGCTCAACGTCCAGATCTGTTGATCGCCAA CTCCCAGCACATTCGCCGCCGCATTGCCAAGCTCTATCGCCGCGAGGCTGTGGTCATTTATCCGCCCGTTCCGCTGCAGG GGTTGGAGCCGGTGGCGGATCCCAGCGCCGATTATGACCTGGTGGCAGGCCGACTGGTGCCCTACAAACGGGTGGATCTG GCGATTGCCGCCTGTGAACGGCTGGGTCGTCGGCTGCTGGTTGTGGGCGAAGGGCCGGAGCTGGCTCGGCTCAAGCGACT GGCGGGGCCGCAGGTGGAGTTTTTGCCCCATCAGCCCCCCGATCGTTTCCGGGAACTGCTAGCCAATTGCCGGCTGCTGC TGTTCCCCTGGGAGGAGGATTTTGGCCTAGTGGCAGTGGAGGCCCAGGCCTGCGGCCGCCCCGTGGTTGCCCTCAACCGG GGAGGTGCCCAAGAGACGGTCATCCACGGCCAAACCGGCATCCTCATTCCCGAGGCCAGTGTGGAAGCGCTGGTGGAAGG GCTGCGGCAGGCGGATCGACAGGAATGGGATCCGCAGCGGATTCGGGCCCATGCTCTGCAATTTGCCCCGGAGCGATTTC ACGCCCAATTGGGATCCCTGCTGCGCTGGGCTTGGCCTCGTTTTCAAGCCGGAGAACGGTTGGATCCCCGAGAATGGAGC GCTCAGTAG
Upstream 100 bases:
>100_bases AGCGGATCGACGAGAAAGCCAAGCAGGTGAGCGGCCCAATTGGCAAAAAGCGCCGCTCTGCCAAGTCCTGACCGTGCCTG AGCCTTGGGGATCCCTTCCT
Downstream 100 bases:
>100_bases GGCCGCCGCTGCACAAAAGTCGGCAACTCAATCCGGTTGCGACTGCCCGTTTCCCCTCCTGCCCGTGAAGCGGCCAAAGC GGAGCGTTTCAGGAGCCTTT
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAVPTLPSRDPAWPERLALVHEYLIWPGGSEKVLQELVAFAPQAPLYVSLFSAHTLPPSWQELTIHTSFLQGWAKWLGVL RPDYHARLKYLLPWMPLAYESFDLSGYDCVISSSHAFAKGILTGASTLHLSYIHSPTRYLWENRELYLQREGLGRSGPVG AIGQWLLHRLRQWDFLAAQRPDLLIANSQHIRRRIAKLYRREAVVIYPPVPLQGLEPVADPSADYDLVAGRLVPYKRVDL AIAACERLGRRLLVVGEGPELARLKRLAGPQVEFLPHQPPDRFRELLANCRLLLFPWEEDFGLVAVEAQACGRPVVALNR GGAQETVIHGQTGILIPEASVEALVEGLRQADRQEWDPQRIRAHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPREWS AQ
Sequences:
>Translated_402_residues MAVPTLPSRDPAWPERLALVHEYLIWPGGSEKVLQELVAFAPQAPLYVSLFSAHTLPPSWQELTIHTSFLQGWAKWLGVL RPDYHARLKYLLPWMPLAYESFDLSGYDCVISSSHAFAKGILTGASTLHLSYIHSPTRYLWENRELYLQREGLGRSGPVG AIGQWLLHRLRQWDFLAAQRPDLLIANSQHIRRRIAKLYRREAVVIYPPVPLQGLEPVADPSADYDLVAGRLVPYKRVDL AIAACERLGRRLLVVGEGPELARLKRLAGPQVEFLPHQPPDRFRELLANCRLLLFPWEEDFGLVAVEAQACGRPVVALNR GGAQETVIHGQTGILIPEASVEALVEGLRQADRQEWDPQRIRAHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPREWS AQ >Mature_401_residues AVPTLPSRDPAWPERLALVHEYLIWPGGSEKVLQELVAFAPQAPLYVSLFSAHTLPPSWQELTIHTSFLQGWAKWLGVLR PDYHARLKYLLPWMPLAYESFDLSGYDCVISSSHAFAKGILTGASTLHLSYIHSPTRYLWENRELYLQREGLGRSGPVGA IGQWLLHRLRQWDFLAAQRPDLLIANSQHIRRRIAKLYRREAVVIYPPVPLQGLEPVADPSADYDLVAGRLVPYKRVDLA IAACERLGRRLLVVGEGPELARLKRLAGPQVEFLPHQPPDRFRELLANCRLLLFPWEEDFGLVAVEAQACGRPVVALNRG GAQETVIHGQTGILIPEASVEALVEGLRQADRQEWDPQRIRAHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPREWSA Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45587; Mature: 45456
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPTLPSRDPAWPERLALVHEYLIWPGGSEKVLQELVAFAPQAPLYVSLFSAHTLPPSW CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHCCCCCCC QELTIHTSFLQGWAKWLGVLRPDYHARLKYLLPWMPLAYESFDLSGYDCVISSSHAFAKG HHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHH ILTGASTLHLSYIHSPTRYLWENRELYLQREGLGRSGPVGAIGQWLLHRLRQWDFLAAQR HHCCCCCEEEEECCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PDLLIANSQHIRRRIAKLYRREAVVIYPPVPLQGLEPVADPSADYDLVAGRLVPYKRVDL CCEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHH AIAACERLGRRLLVVGEGPELARLKRLAGPQVEFLPHQPPDRFRELLANCRLLLFPWEED HHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCEEEEEECCCC FGLVAVEAQACGRPVVALNRGGAQETVIHGQTGILIPEASVEALVEGLRQADRQEWDPQR CCEEEEEHHHCCCCEEEECCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHCCCCHHH IRAHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPREWSAQ HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AVPTLPSRDPAWPERLALVHEYLIWPGGSEKVLQELVAFAPQAPLYVSLFSAHTLPPSW CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHCCCCCCC QELTIHTSFLQGWAKWLGVLRPDYHARLKYLLPWMPLAYESFDLSGYDCVISSSHAFAKG HHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHH ILTGASTLHLSYIHSPTRYLWENRELYLQREGLGRSGPVGAIGQWLLHRLRQWDFLAAQR HHCCCCCEEEEECCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PDLLIANSQHIRRRIAKLYRREAVVIYPPVPLQGLEPVADPSADYDLVAGRLVPYKRVDL CCEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHH AIAACERLGRRLLVVGEGPELARLKRLAGPQVEFLPHQPPDRFRELLANCRLLLFPWEED HHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCEEEEEECCCC FGLVAVEAQACGRPVVALNRGGAQETVIHGQTGILIPEASVEALVEGLRQADRQEWDPQR CCEEEEEHHHCCCCEEEECCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHCCCCHHH IRAHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPREWSAQ HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]