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The map label for this gene is 86608117

Identifier: 86608117

GI number: 86608117

Start: 637944

End: 638417

Strand: Reverse

Name: 86608117

Synonym: CYB_0627

Alternate gene names: NA

Gene position: 638417-637944 (Counterclockwise)

Preceding gene: 86608121

Following gene: 86608112

Centisome position: 20.95

GC content: 55.91

Gene sequence:

>474_bases
ATGCTGACTCAACTGCGCGAACTGAGCATCGCTGCCGACGGGCGCTATCTCAGGGATGAGGAGCTGCAGTTCATGGAGAC
CTATCTAGCCTCCTTTGACCTTCGCCTGAGCGCCTATCGCAAGATTCAGGCGGCGGAGGCCCAGATCATCCGGGATGTGG
AGATGAAAATGCGCGCGCTGGATCCCTACTTGCTCATGCGAGGGGTGGAAGACTTCAGCAACAAGTGGAAGGCTGACACC
GTGCGGGTTTTGCGCCTTTCGGCTTTGGCCATGCTCCTGGACGATGAGCAACGCTACAAAGATCGATTTCTCTACTGGTT
CCAAACACTGATGCGAGCCTTCCGCACCCAACGCAGTTGCGAGGCCACCTATCGCTTCCTACAAGAAGTGATAGCCAATT
ACCTCACCCCCGAAGAAACCAAGTTGATCAGGCCGATTCTGGAAACCAACCGCACGCTGTTGGGCCTCAACTAG

Upstream 100 bases:

>100_bases
GCCAGGAGTTTGGGGATAGGATTGAGGGACCAAGGCTGTGCCGTCAGCCAGGATAGGTGGTGTTTTTTCCATTCTCATTC
CAGCTTGCCCAGGGATCCCT

Downstream 100 bases:

>100_bases
GCAGCCGTCTCAGCAGACTCTCCAGAACCAGCCGACTCCACCACCTCCAGCTCATCAGCCTGGAGATGGGCACGGAACTT
GTTGTCAAACTGCACCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Allophycocyanin Alpha Subunit ApcA; Allophycocyanin Alpha Subunit; Allophycocyanin Beta-18 Subunit

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLTQLRELSIAADGRYLRDEELQFMETYLASFDLRLSAYRKIQAAEAQIIRDVEMKMRALDPYLLMRGVEDFSNKWKADT
VRVLRLSALAMLLDDEQRYKDRFLYWFQTLMRAFRTQRSCEATYRFLQEVIANYLTPEETKLIRPILETNRTLLGLN

Sequences:

>Translated_157_residues
MLTQLRELSIAADGRYLRDEELQFMETYLASFDLRLSAYRKIQAAEAQIIRDVEMKMRALDPYLLMRGVEDFSNKWKADT
VRVLRLSALAMLLDDEQRYKDRFLYWFQTLMRAFRTQRSCEATYRFLQEVIANYLTPEETKLIRPILETNRTLLGLN
>Mature_157_residues
MLTQLRELSIAADGRYLRDEELQFMETYLASFDLRLSAYRKIQAAEAQIIRDVEMKMRALDPYLLMRGVEDFSNKWKADT
VRVLRLSALAMLLDDEQRYKDRFLYWFQTLMRAFRTQRSCEATYRFLQEVIANYLTPEETKLIRPILETNRTLLGLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18747; Mature: 18747

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQLRELSIAADGRYLRDEELQFMETYLASFDLRLSAYRKIQAAEAQIIRDVEMKMRAL
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPYLLMRGVEDFSNKWKADTVRVLRLSALAMLLDDEQRYKDRFLYWFQTLMRAFRTQRSC
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EATYRFLQEVIANYLTPEETKLIRPILETNRTLLGLN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MLTQLRELSIAADGRYLRDEELQFMETYLASFDLRLSAYRKIQAAEAQIIRDVEMKMRAL
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPYLLMRGVEDFSNKWKADTVRVLRLSALAMLLDDEQRYKDRFLYWFQTLMRAFRTQRSC
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EATYRFLQEVIANYLTPEETKLIRPILETNRTLLGLN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA