| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is glgP [H]
Identifier: 86608121
GI number: 86608121
Start: 642012
End: 644168
Strand: Reverse
Name: glgP [H]
Synonym: CYB_0632
Alternate gene names: 86608121
Gene position: 644168-642012 (Counterclockwise)
Preceding gene: 86608122
Following gene: 86608117
Centisome position: 21.14
GC content: 59.85
Gene sequence:
>2157_bases GTGCTGCCGGAAGCGCTCACGCCCCTGTGCGAGATCGCCCGCAACTATTGGTGGACCTGGAACCCGGATCACCTCACCAT TTTCCGGGAAATGGATCCCGCCCTGTGGGAAAAAACCTCCCACAACCCGGTGCGCATGCTGGAGGAGGTTTCCTACTTGC GGTTGGCAGCCTTGGCCACCGATGTGAACTACCTCAACACGTTGAACCGGATGGTGCAGTCCTATCGGCAGTACATGACG GCTGAGGATACCTGGGCCAAGCGCACCATGAAAACCTACGACTGGCAGCGTCCTATTGCCTATTTCTGTGCCGAATACGG CTTGCACGAGTCTTTGCCCACCTACTCTGGCGGGCTGGGTATGTTGGCCGCCGATCACCTCAAGTCGGCTTCAGATTTGG GAGTGCCCCTGGTGGCCATCGGGTTGCTCTACCGTCAGGGCTACTTCCAACAGCGCCTGGACAACAATGGCTGGCAGGGG GAGCTTTACGAAGACTCTGAGTTTGAGTCTCTGCCGTTGACTCTGGTGCGCCAGCCGGATGGCAGCCCTCTGTTGGTGGA AGTGGCGATGCGGCAGCGGTTGGTGAAGGCGCGTGCCTGGCGAGCAGACGTGGGCCGGGTGCCGCTCTTTCTGCTGGACA CCGACCTGCCGGAGAACGACCCCATCGACCGCTGGATTACCGCCCACCTCTACGGGGGCAGCACCGATACCCGCATCGCC CAAGAGTGCATCCTGGGTATCGGTGGGGTGCGTCTGCTGCGCCAGTTGGGTTTGGATCCCATGGTCTATCACATGAATGA AGGGCACGCTGCTTTCCTAACGCTGGAGTTGCTGCGGGAGGAAGTGGCGCGGGGCACCCCCTTCGAGACGGCGGAGGCCA AGGTGCGGGAAAAATGTGTGTTTACCACCCATACACCGGTGCCGGCTGGCCACGATGCCTTTAGCCCCAATGAGATGGAT GCGTTCTTTGCCTCCTTCTGGCCTCAACTGGGCCTGACGCGGGAACAATTTTTGGCTTTGGGAGCTCGGCGCACCGGGGA TCCCTGGGAGCGCTTTAACATGACGGTGCTGGCTTTGCGGTACGCGCGGGCAGCCAATGGCGTAAGCAAGCTCCACGGAC GGGTTTCTCGCGAAATGTGGCATGTGCTCTACCCTGAGCGATCGGTGGATGAGGTGCCCATCAGCTCCATTACCAATGGG GTTCACGCCCGTACCTGGGTTTCCCCCCTCTTCTGGAATCTCTACGACCAGTACTTGGGCCCCGATTGGCCGGAGCGGGT GTCAGACCCGGAACTGTGGGCCAAGGTGGAAGAGATCCCAGATGAAGAACTGTGGCGGCGCAAAGAAGCTCTGCGGGAGC GGCTGGTGTCTTTCACCCGTCACCGGGTGTTGCGGGCCCGGCGCAATCGCGGCGAAAGCAACGAACGCATCCAAGCGGTC AACCAGTTGCTGGATCCCAAGGTCTTGACGATTGGGTTTGCCCGTCGCTTCAGCACCTACAAGCGAGGAGATTTGATCCT GCGAAATCTGGAGCGAATTACCCGCATCTTCACCAACAAAGAGTACCCTGTGCAAATTATCTTCGCCGGCAAGGCCCATC CGCGGGATGAAGGGGGCAAGCGCCTGATCCAGCGGGTGGTGGAATGGTCGAACCGGCCTGAGGTGGCCAACCGGGTCGCC TTCATCGAAAACTACGATGCCTATGTCGGTCGCAATTTGGTGCAGGGGGTCGATGTGTGGCTGAACAACCCGCGACGCCC TCTGGAAGCCTCTGGCACCTCAGGGCAAAAGGTGGGCTTCAGTGGGGGATTGAATTTGTCGGTGCTGGATGGCTGGTGGC CGGAGGGTTACAACGGTCGCAATGGCTGGGCTATTGGCCAAGAAATCGAAGGTCTGGATCCCGCTGCCCAAGACGACTTG GACGCCAACTCCCTCTACGACTTGTTGGAGTATGAAGTAATCCCCATGTTCTACGACCGGGATGAGAAAGGGATCCCACG TCGTTGGATTGCCCGCATGAAGGAGGCGATCCGCACGCTCAACCCCGTTTTCAACACCGACCGCATGGTAGCGGAGTACG TGCTGAAAATCTACGAGCCTCAGCCCCTGGAAGCAGAGGCGAGCCGGACTTTGTTGGGTTCGGCTGTTGCCGGCTAG
Upstream 100 bases:
>100_bases CGACCTCTACCTCTTCTTTTTCGAGCCCATAACTTTAACCCCAGGTATCTGTCCTATGTCCATTGCCACCTTAGCTCCTG CTTTTCCCGAACGTTGTCCG
Downstream 100 bases:
>100_bases GGTGGACTCCCCCTCTCCCAGCGCAAATCATACAAAACATTGGGATCCCTCTCTCCTCAAGAGGAAAAGCAGGGATCCCA AGTTTGAGCTTGGGGACAAG
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MLPEALTPLCEIARNYWWTWNPDHLTIFREMDPALWEKTSHNPVRMLEEVSYLRLAALATDVNYLNTLNRMVQSYRQYMT AEDTWAKRTMKTYDWQRPIAYFCAEYGLHESLPTYSGGLGMLAADHLKSASDLGVPLVAIGLLYRQGYFQQRLDNNGWQG ELYEDSEFESLPLTLVRQPDGSPLLVEVAMRQRLVKARAWRADVGRVPLFLLDTDLPENDPIDRWITAHLYGGSTDTRIA QECILGIGGVRLLRQLGLDPMVYHMNEGHAAFLTLELLREEVARGTPFETAEAKVREKCVFTTHTPVPAGHDAFSPNEMD AFFASFWPQLGLTREQFLALGARRTGDPWERFNMTVLALRYARAANGVSKLHGRVSREMWHVLYPERSVDEVPISSITNG VHARTWVSPLFWNLYDQYLGPDWPERVSDPELWAKVEEIPDEELWRRKEALRERLVSFTRHRVLRARRNRGESNERIQAV NQLLDPKVLTIGFARRFSTYKRGDLILRNLERITRIFTNKEYPVQIIFAGKAHPRDEGGKRLIQRVVEWSNRPEVANRVA FIENYDAYVGRNLVQGVDVWLNNPRRPLEASGTSGQKVGFSGGLNLSVLDGWWPEGYNGRNGWAIGQEIEGLDPAAQDDL DANSLYDLLEYEVIPMFYDRDEKGIPRRWIARMKEAIRTLNPVFNTDRMVAEYVLKIYEPQPLEAEASRTLLGSAVAG
Sequences:
>Translated_718_residues MLPEALTPLCEIARNYWWTWNPDHLTIFREMDPALWEKTSHNPVRMLEEVSYLRLAALATDVNYLNTLNRMVQSYRQYMT AEDTWAKRTMKTYDWQRPIAYFCAEYGLHESLPTYSGGLGMLAADHLKSASDLGVPLVAIGLLYRQGYFQQRLDNNGWQG ELYEDSEFESLPLTLVRQPDGSPLLVEVAMRQRLVKARAWRADVGRVPLFLLDTDLPENDPIDRWITAHLYGGSTDTRIA QECILGIGGVRLLRQLGLDPMVYHMNEGHAAFLTLELLREEVARGTPFETAEAKVREKCVFTTHTPVPAGHDAFSPNEMD AFFASFWPQLGLTREQFLALGARRTGDPWERFNMTVLALRYARAANGVSKLHGRVSREMWHVLYPERSVDEVPISSITNG VHARTWVSPLFWNLYDQYLGPDWPERVSDPELWAKVEEIPDEELWRRKEALRERLVSFTRHRVLRARRNRGESNERIQAV NQLLDPKVLTIGFARRFSTYKRGDLILRNLERITRIFTNKEYPVQIIFAGKAHPRDEGGKRLIQRVVEWSNRPEVANRVA FIENYDAYVGRNLVQGVDVWLNNPRRPLEASGTSGQKVGFSGGLNLSVLDGWWPEGYNGRNGWAIGQEIEGLDPAAQDDL DANSLYDLLEYEVIPMFYDRDEKGIPRRWIARMKEAIRTLNPVFNTDRMVAEYVLKIYEPQPLEAEASRTLLGSAVAG >Mature_718_residues MLPEALTPLCEIARNYWWTWNPDHLTIFREMDPALWEKTSHNPVRMLEEVSYLRLAALATDVNYLNTLNRMVQSYRQYMT AEDTWAKRTMKTYDWQRPIAYFCAEYGLHESLPTYSGGLGMLAADHLKSASDLGVPLVAIGLLYRQGYFQQRLDNNGWQG ELYEDSEFESLPLTLVRQPDGSPLLVEVAMRQRLVKARAWRADVGRVPLFLLDTDLPENDPIDRWITAHLYGGSTDTRIA QECILGIGGVRLLRQLGLDPMVYHMNEGHAAFLTLELLREEVARGTPFETAEAKVREKCVFTTHTPVPAGHDAFSPNEMD AFFASFWPQLGLTREQFLALGARRTGDPWERFNMTVLALRYARAANGVSKLHGRVSREMWHVLYPERSVDEVPISSITNG VHARTWVSPLFWNLYDQYLGPDWPERVSDPELWAKVEEIPDEELWRRKEALRERLVSFTRHRVLRARRNRGESNERIQAV NQLLDPKVLTIGFARRFSTYKRGDLILRNLERITRIFTNKEYPVQIIFAGKAHPRDEGGKRLIQRVVEWSNRPEVANRVA FIENYDAYVGRNLVQGVDVWLNNPRRPLEASGTSGQKVGFSGGLNLSVLDGWWPEGYNGRNGWAIGQEIEGLDPAAQDDL DANSLYDLLEYEVIPMFYDRDEKGIPRRWIARMKEAIRTLNPVFNTDRMVAEYVLKIYEPQPLEAEASRTLLGSAVAG
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 82513; Mature: 82513
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPEALTPLCEIARNYWWTWNPDHLTIFREMDPALWEKTSHNPVRMLEEVSYLRLAALAT CCCHHHHHHHHHHHCCCEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH DVNYLNTLNRMVQSYRQYMTAEDTWAKRTMKTYDWQRPIAYFCAEYGLHESLPTYSGGLG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCH MLAADHLKSASDLGVPLVAIGLLYRQGYFQQRLDNNGWQGELYEDSEFESLPLTLVRQPD HHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC GSPLLVEVAMRQRLVKARAWRADVGRVPLFLLDTDLPENDPIDRWITAHLYGGSTDTRIA CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHH QECILGIGGVRLLRQLGLDPMVYHMNEGHAAFLTLELLREEVARGTPFETAEAKVREKCV HHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEE FTTHTPVPAGHDAFSPNEMDAFFASFWPQLGLTREQFLALGARRTGDPWERFNMTVLALR EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH YARAANGVSKLHGRVSREMWHVLYPERSVDEVPISSITNGVHARTWVSPLFWNLYDQYLG HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCC PDWPERVSDPELWAKVEEIPDEELWRRKEALRERLVSFTRHRVLRARRNRGESNERIQAV CCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH NQLLDPKVLTIGFARRFSTYKRGDLILRNLERITRIFTNKEYPVQIIFAGKAHPRDEGGK HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHH RLIQRVVEWSNRPEVANRVAFIENYDAYVGRNLVQGVDVWLNNPRRPLEASGTSGQKVGF HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECC SGGLNLSVLDGWWPEGYNGRNGWAIGQEIEGLDPAAQDDLDANSLYDLLEYEVIPMFYDR CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHEECC DEKGIPRRWIARMKEAIRTLNPVFNTDRMVAEYVLKIYEPQPLEAEASRTLLGSAVAG CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLPEALTPLCEIARNYWWTWNPDHLTIFREMDPALWEKTSHNPVRMLEEVSYLRLAALAT CCCHHHHHHHHHHHCCCEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH DVNYLNTLNRMVQSYRQYMTAEDTWAKRTMKTYDWQRPIAYFCAEYGLHESLPTYSGGLG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCH MLAADHLKSASDLGVPLVAIGLLYRQGYFQQRLDNNGWQGELYEDSEFESLPLTLVRQPD HHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC GSPLLVEVAMRQRLVKARAWRADVGRVPLFLLDTDLPENDPIDRWITAHLYGGSTDTRIA CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHH QECILGIGGVRLLRQLGLDPMVYHMNEGHAAFLTLELLREEVARGTPFETAEAKVREKCV HHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEE FTTHTPVPAGHDAFSPNEMDAFFASFWPQLGLTREQFLALGARRTGDPWERFNMTVLALR EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH YARAANGVSKLHGRVSREMWHVLYPERSVDEVPISSITNGVHARTWVSPLFWNLYDQYLG HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCC PDWPERVSDPELWAKVEEIPDEELWRRKEALRERLVSFTRHRVLRARRNRGESNERIQAV CCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH NQLLDPKVLTIGFARRFSTYKRGDLILRNLERITRIFTNKEYPVQIIFAGKAHPRDEGGK HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHH RLIQRVVEWSNRPEVANRVAFIENYDAYVGRNLVQGVDVWLNNPRRPLEASGTSGQKVGF HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECC SGGLNLSVLDGWWPEGYNGRNGWAIGQEIEGLDPAAQDDLDANSLYDLLEYEVIPMFYDR CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHEECC DEKGIPRRWIARMKEAIRTLNPVFNTDRMVAEYVLKIYEPQPLEAEASRTLLGSAVAG CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]