Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608077

Identifier: 86608077

GI number: 86608077

Start: 593129

End: 593842

Strand: Reverse

Name: 86608077

Synonym: CYB_0586

Alternate gene names: NA

Gene position: 593842-593129 (Counterclockwise)

Preceding gene: 86608078

Following gene: 86608076

Centisome position: 19.49

GC content: 58.54

Gene sequence:

>714_bases
ATGCTGTCAGACACTGTCGATCTCAGCCCCCAATCTTGGGATCTCGCCCACGGCATCGCCATGACCTTGGCCAAAGAAAG
GGTGGATGTCGACGAGTTGAGCAAGTGCATCGCCTATCTGCGCTCGGTTGCCCATCACCCTGACGCGGGATCCCGTTTCT
TCCGATTCACCGGCGAGCTGGTGCGAGAAACTGGCCTCCACCGCAGCAACGAAACCCCACGCTACTACCGGCTCATCGAC
CAAACCTGTAAAAAGTACTTGCAATCTCTGCAGGATAGGCCGGCTGAGATGCTGCAGATCCTGGGCTGGGCCGCCCGCCT
GGCCCGCTACTACAAAGATGGGGGAGTGCCCATTGGCGAGATTCCGCCGCCTCAGGGATCCCAACCCAACGACAACTCCG
GTCGCAAGGACTCCGTTCCCCAAGGGGCGGGAAACAAATCCCAGGACGACAGACAACAACAAAACCATCAACACCAACAA
GACCAGGCCCAGCATCAGGCCCGCAAAGCTCGCTTCCAGACCGGGCAAAAGCTGAAGGCCACCATCACCAACATCAAGGG
CAACGAAGTCACCTTCCAGATTCTGGACACAGACACCAAGCTCACCCAGAAGGAGCCCAAACGGGCGGGATCCCTCTCGG
TGGGGCAAGAGGTGCAGGTGGAAGTTCTGGGTCTAAAGGAAGATGGCAGAATCCGCAAGGCCAAGCTGCTCTGA

Upstream 100 bases:

>100_bases
CAGGGCTACATCTTGCCCGAACAACTCAAGCGATTGGCCGCCATCCTGAGTCCCACTGCTCTGCGCGAGCCACCCACCGG
AGTGTACTGAGGGTTCCCCC

Downstream 100 bases:

>100_bases
GCACAAAGCGGAACAGAGCCCTCGAAAAGTTTGAGTTAACCGGCCATCCATGCAGACCATCATCATGACGGTGGGCACTT
CCTTGCTCACCAATCCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLSDTVDLSPQSWDLAHGIAMTLAKERVDVDELSKCIAYLRSVAHHPDAGSRFFRFTGELVRETGLHRSNETPRYYRLID
QTCKKYLQSLQDRPAEMLQILGWAARLARYYKDGGVPIGEIPPPQGSQPNDNSGRKDSVPQGAGNKSQDDRQQQNHQHQQ
DQAQHQARKARFQTGQKLKATITNIKGNEVTFQILDTDTKLTQKEPKRAGSLSVGQEVQVEVLGLKEDGRIRKAKLL

Sequences:

>Translated_237_residues
MLSDTVDLSPQSWDLAHGIAMTLAKERVDVDELSKCIAYLRSVAHHPDAGSRFFRFTGELVRETGLHRSNETPRYYRLID
QTCKKYLQSLQDRPAEMLQILGWAARLARYYKDGGVPIGEIPPPQGSQPNDNSGRKDSVPQGAGNKSQDDRQQQNHQHQQ
DQAQHQARKARFQTGQKLKATITNIKGNEVTFQILDTDTKLTQKEPKRAGSLSVGQEVQVEVLGLKEDGRIRKAKLL
>Mature_237_residues
MLSDTVDLSPQSWDLAHGIAMTLAKERVDVDELSKCIAYLRSVAHHPDAGSRFFRFTGELVRETGLHRSNETPRYYRLID
QTCKKYLQSLQDRPAEMLQILGWAARLARYYKDGGVPIGEIPPPQGSQPNDNSGRKDSVPQGAGNKSQDDRQQQNHQHQQ
DQAQHQARKARFQTGQKLKATITNIKGNEVTFQILDTDTKLTQKEPKRAGSLSVGQEVQVEVLGLKEDGRIRKAKLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26683; Mature: 26683

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDTVDLSPQSWDLAHGIAMTLAKERVDVDELSKCIAYLRSVAHHPDAGSRFFRFTGEL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VRETGLHRSNETPRYYRLIDQTCKKYLQSLQDRPAEMLQILGWAARLARYYKDGGVPIGE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
IPPPQGSQPNDNSGRKDSVPQGAGNKSQDDRQQQNHQHQQDQAQHQARKARFQTGQKLKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TITNIKGNEVTFQILDTDTKLTQKEPKRAGSLSVGQEVQVEVLGLKEDGRIRKAKLL
HHHCCCCCEEEEEEECCCCHHHHHCHHHCCCCCCCCEEEEEEEEECCCCCCHHHCCC
>Mature Secondary Structure
MLSDTVDLSPQSWDLAHGIAMTLAKERVDVDELSKCIAYLRSVAHHPDAGSRFFRFTGEL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VRETGLHRSNETPRYYRLIDQTCKKYLQSLQDRPAEMLQILGWAARLARYYKDGGVPIGE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
IPPPQGSQPNDNSGRKDSVPQGAGNKSQDDRQQQNHQHQQDQAQHQARKARFQTGQKLKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TITNIKGNEVTFQILDTDTKLTQKEPKRAGSLSVGQEVQVEVLGLKEDGRIRKAKLL
HHHCCCCCEEEEEEECCCCHHHHHCHHHCCCCCCCCEEEEEEEEECCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA