Click here to switch to the map view.

The map label for this gene is 86608076

Identifier: 86608076

GI number: 86608076

Start: 592183

End: 593079

Strand: Reverse

Name: 86608076

Synonym: CYB_0585

Alternate gene names: NA

Gene position: 593079-592183 (Counterclockwise)

Preceding gene: 86608077

Following gene: 86608069

Centisome position: 19.47

GC content: 57.41

Gene sequence:

>897_bases
ATGCAGACCATCATCATGACGGTGGGCACTTCCTTGCTCACCAATCCCGACAAGAACCTAGAGCCGCAGCGCCCCTGGCT
GGGACAAAAAACCATTGGGGATCCGGAGCAAGCGCTGGCCTGGATGAAAAGAACCGATCTGGAGCTGATCAGCGCCGAAA
CCAACACCTACTTGCAGCTGGATCCCACCTCGAATGATGCCTTGATTTTGCTGCACTCAGAAACCCCCGACGGATTGGAG
TGTGCCCAGATTTTGAAGCTCTTTTTTGAGCAAGAGCTGGGTCAGCAGCAGGTCTCTTTGGTTCCCCTTCCCGGCATCAA
CTACGAGCTAGAGGGATCCTCACTGGAGCGGATGGCCGAGCTGTTGAAACAGTTGGCAGAGAGCGCCAGGGGGATCGTCA
CCTTTGCCGCTACCGGCGGGTTTAAAGCCCAAGCCATGATCATGGCTGTGGTGGGCAGCCAATTGGGGGTCCCGGTTTGC
TACATCCATGAGCAATACAAATCCCTGGTCTACTTGCCCTACCTACAGCCGCAAGTTCAGCCCCGGATCCCACGGGCAGA
TCTCCCCGATTCAGGCCGAGATCGCTCCCAGATCATCCAAATCCGAAGCGATGCCAGCCATCACCGACCCCGCAGTTGGG
CCAAAGTGGAAAGACTCCTGCGAGACATTCCCTGGGTGGATCTGGTTCGATACGATCCACACGCCTACGCTGCCCCCAAA
AACAGCGTCAAAGCCTCAAACCGCAAAACCGAAGATGGCCGCCACATTCTGTGGATCCACCTCCACGAGAGCCAGGACAC
CCACCTCGCTGTCAGAGTAGAAACCACCGGCTACACCCCCGAGCACCTAGAGCTGGCTGCCACCGAATTGCGGCAACGCT
TGGGCCGTCTGCTTTGA

Upstream 100 bases:

>100_bases
GTTCTGGGTCTAAAGGAAGATGGCAGAATCCGCAAGGCCAAGCTGCTCTGAGCACAAAGCGGAACAGAGCCCTCGAAAAG
TTTGAGTTAACCGGCCATCC

Downstream 100 bases:

>100_bases
GTGTTTCCATGAATCCCGCTTCCCCAAAGGGAAGTGACTTATCAGGTATAGGGTTTTTGCTACGCAAACCTACATAAAAT
AAGGTATCGCATTCGGAACA

Product: CRISPR-associated protein APE2256 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQTIIMTVGTSLLTNPDKNLEPQRPWLGQKTIGDPEQALAWMKRTDLELISAETNTYLQLDPTSNDALILLHSETPDGLE
CAQILKLFFEQELGQQQVSLVPLPGINYELEGSSLERMAELLKQLAESARGIVTFAATGGFKAQAMIMAVVGSQLGVPVC
YIHEQYKSLVYLPYLQPQVQPRIPRADLPDSGRDRSQIIQIRSDASHHRPRSWAKVERLLRDIPWVDLVRYDPHAYAAPK
NSVKASNRKTEDGRHILWIHLHESQDTHLAVRVETTGYTPEHLELAATELRQRLGRLL

Sequences:

>Translated_298_residues
MQTIIMTVGTSLLTNPDKNLEPQRPWLGQKTIGDPEQALAWMKRTDLELISAETNTYLQLDPTSNDALILLHSETPDGLE
CAQILKLFFEQELGQQQVSLVPLPGINYELEGSSLERMAELLKQLAESARGIVTFAATGGFKAQAMIMAVVGSQLGVPVC
YIHEQYKSLVYLPYLQPQVQPRIPRADLPDSGRDRSQIIQIRSDASHHRPRSWAKVERLLRDIPWVDLVRYDPHAYAAPK
NSVKASNRKTEDGRHILWIHLHESQDTHLAVRVETTGYTPEHLELAATELRQRLGRLL
>Mature_298_residues
MQTIIMTVGTSLLTNPDKNLEPQRPWLGQKTIGDPEQALAWMKRTDLELISAETNTYLQLDPTSNDALILLHSETPDGLE
CAQILKLFFEQELGQQQVSLVPLPGINYELEGSSLERMAELLKQLAESARGIVTFAATGGFKAQAMIMAVVGSQLGVPVC
YIHEQYKSLVYLPYLQPQVQPRIPRADLPDSGRDRSQIIQIRSDASHHRPRSWAKVERLLRDIPWVDLVRYDPHAYAAPK
NSVKASNRKTEDGRHILWIHLHESQDTHLAVRVETTGYTPEHLELAATELRQRLGRLL

Specific function: Unknown

COG id: COG4006

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33649; Mature: 33649

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIIMTVGTSLLTNPDKNLEPQRPWLGQKTIGDPEQALAWMKRTDLELISAETNTYLQL
CCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEE
DPTSNDALILLHSETPDGLECAQILKLFFEQELGQQQVSLVPLPGINYELEGSSLERMAE
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHH
LLKQLAESARGIVTFAATGGFKAQAMIMAVVGSQLGVPVCYIHEQYKSLVYLPYLQPQVQ
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCEEEECCCCCCCC
PRIPRADLPDSGRDRSQIIQIRSDASHHRPRSWAKVERLLRDIPWVDLVRYDPHAYAAPK
CCCCCCCCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
NSVKASNRKTEDGRHILWIHLHESQDTHLAVRVETTGYTPEHLELAATELRQRLGRLL
CCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTIIMTVGTSLLTNPDKNLEPQRPWLGQKTIGDPEQALAWMKRTDLELISAETNTYLQL
CCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEE
DPTSNDALILLHSETPDGLECAQILKLFFEQELGQQQVSLVPLPGINYELEGSSLERMAE
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHH
LLKQLAESARGIVTFAATGGFKAQAMIMAVVGSQLGVPVCYIHEQYKSLVYLPYLQPQVQ
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCEEEECCCCCCCC
PRIPRADLPDSGRDRSQIIQIRSDASHHRPRSWAKVERLLRDIPWVDLVRYDPHAYAAPK
CCCCCCCCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
NSVKASNRKTEDGRHILWIHLHESQDTHLAVRVETTGYTPEHLELAATELRQRLGRLL
CCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA