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The map label for this gene is infC [H]

Identifier: 86608017

GI number: 86608017

Start: 539421

End: 539978

Strand: Reverse

Name: infC [H]

Synonym: CYB_0524

Alternate gene names: 86608017

Gene position: 539978-539421 (Counterclockwise)

Preceding gene: 86608022

Following gene: 86608016

Centisome position: 17.72

GC content: 57.17

Gene sequence:

>558_bases
TTGACCGTAGAGCGTCCACCTGACCGCTTCCCCCGCAAGCAGCGCGCAGAGCTGCCGGCTATCAACGAGCGCATCCGCTT
CCCCAAAATCCGCCTTATCGATACCGACGGCACTCAGTTGGGGATCATGAGCCCGCGCGAAGCCCTGCGCCTGGCAGAAG
AAAAAGATCTGGACTTGGTCTTGGTGAGCGAAAAGGCCGACCCGCCCGTCTGCCGCATCATGGACTACGGCAAGTTCAAG
TTTGAGAAGGAGAAGAAAGAACGGGAGGCCCGCAAGAAGCAACACACTGCCGAGATCAAGGAAGTGAAGTTTCGCTACAA
CATCGGCGAGCACGACTACAACGTGCGCCTGCGCAGCGCCCAACAGTTCTTGGGGGATGGAGACAAGGTGAAAGCCACGG
TGATGTTCCGCGGTCGTGAGGCCCAGCACGCCGAGTTAGGGGAAGAATTGCTGCACCGCTTGTTCAAAGACTTACAAGAA
GTGGCGGAAATGCAGCAGCCCCCCCAAAAGGAAGGGCGAAACATCACGATGATTCTCTCTCCCAAAAAATCGGTCTGA

Upstream 100 bases:

>100_bases
TTGATTGGAGAGTCCAAACTCAGGGTTCGGCACTGCTCCGAAGGGGGCTAGTCCTACTTAGCATTTGTCTTGTGTTGTTA
TTTCGTTGAGAGAGGAAAAC

Downstream 100 bases:

>100_bases
GGAGGGATCCCACCCATGCCCCTTGCCGTTGGGGATCCGGCTCCGGAGTTCACCCTGCCCGATGCCGAGGGCAATCCCAT
CAGCTTGAGCCAGTTGCGGG

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTVERPPDRFPRKQRAELPAINERIRFPKIRLIDTDGTQLGIMSPREALRLAEEKDLDLVLVSEKADPPVCRIMDYGKFK
FEKEKKEREARKKQHTAEIKEVKFRYNIGEHDYNVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKDLQE
VAEMQQPPQKEGRNITMILSPKKSV

Sequences:

>Translated_185_residues
MTVERPPDRFPRKQRAELPAINERIRFPKIRLIDTDGTQLGIMSPREALRLAEEKDLDLVLVSEKADPPVCRIMDYGKFK
FEKEKKEREARKKQHTAEIKEVKFRYNIGEHDYNVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKDLQE
VAEMQQPPQKEGRNITMILSPKKSV
>Mature_184_residues
TVERPPDRFPRKQRAELPAINERIRFPKIRLIDTDGTQLGIMSPREALRLAEEKDLDLVLVSEKADPPVCRIMDYGKFKF
EKEKKEREARKKQHTAEIKEVKFRYNIGEHDYNVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKDLQEV
AEMQQPPQKEGRNITMILSPKKSV

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=173, Percent_Identity=52.0231213872832, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 21652; Mature: 21521

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVERPPDRFPRKQRAELPAINERIRFPKIRLIDTDGTQLGIMSPREALRLAEEKDLDLV
CCCCCCCCCCCCHHHCCCCCHHHHCCCCEEEEEECCCCEECCCCHHHHHHHHHCCCCCEE
LVSEKADPPVCRIMDYGKFKFEKEKKEREARKKQHTAEIKEVKFRYNIGEHDYNVRLRSA
EEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEHHH
QQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKDLQEVAEMQQPPQKEGRNITMILS
HHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEC
PKKSV
CCCCC
>Mature Secondary Structure 
TVERPPDRFPRKQRAELPAINERIRFPKIRLIDTDGTQLGIMSPREALRLAEEKDLDLV
CCCCCCCCCCCHHHCCCCCHHHHCCCCEEEEEECCCCEECCCCHHHHHHHHHCCCCCEE
LVSEKADPPVCRIMDYGKFKFEKEKKEREARKKQHTAEIKEVKFRYNIGEHDYNVRLRSA
EEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEHHH
QQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKDLQEVAEMQQPPQKEGRNITMILS
HHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEC
PKKSV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA