Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607968

Identifier: 86607968

GI number: 86607968

Start: 483699

End: 484709

Strand: Direct

Name: 86607968

Synonym: CYB_0474

Alternate gene names: NA

Gene position: 483699-484709 (Clockwise)

Preceding gene: 86607967

Following gene: 86607970

Centisome position: 15.88

GC content: 46.19

Gene sequence:

>1011_bases
TTGGCTAGGAGCCAAGCAATTCACCTAAAGGCTTGCAGCTCCACCATGGCCAGAGTTTGCATAATTACCACTGTTCGGGA
TCCAGGCGTGTGCTTGGAGTCGTTCATTCGCTATCACCTTGCCCTTGGAATTGCCCATATTTATATCTTCTTTGACGATC
TAGAGGATCCCGCTATTCAGGTGGCACTTCAGTTTTCCGATGTAACGGCTATTCCCAACGATGAAGCTTTGCAAGTCCAA
CAAGCATTGGGGAATGTTCTCTATCCAAAATATGGCCCTCATGTTGGCTATGAGGTCATGGCTCGTCAGATCCTTAACGT
AGAAACTGCTATACAACTTGCCCTGGATCAGGGCATGGACTGGATTCTTCATATTGACGGAGACGAGCTTTTTTATCCTG
GCCAGACAACGGCTCCAAATTGGTTTGATCGAGTAAGCGACGACATATTTCAAGTTACGTTTCTAAACCACGAAGCAGCT
CCCGAAGCGTTTGAGATCGAAGACTACTTCCGCGAGGTCACTTTATTTAAGAGAAATCCTGCTATTTTGGATCCCGGATT
CTATACCCAGTTTCAGAAGATCTCTAGTAAGAGTCAATACTTTTTGGCTTACCAGAATGGAAAGTCAGCAGCTCGGATCT
ATCCCTCTCTTCTGCCTAACAGCGTACATAGCTTTGATATTCCAGGGGATCATACTCTAGTAACGTCGTCTCCCTCTATT
TTGCACTACTTGAACTGCGGATTCCAGAACTACTATAAAAAATACGCCCAACCGGGAAACTTTCCCGACTACTGGTGGCG
CTCCAAGTCTAATCCTATTCGGGTGCCTTTTCACTTAACCTCACGGGATGCTTACTGCTCGGGAGATAGAACTCGCATGG
AAGCTCTCTATCAGGAGTTTATACTTTACAACAATCCTGAAGCCAGTCAAAGCCTCATGGAAAACGGCATTCTCACACGC
ATTTGCTACCCTTCCCAGCTACTGTCATCTCTCTCTACCTCACCGGTTTAG

Upstream 100 bases:

>100_bases
ATAACAGCATCGTCTTCTTCTCCAGCAGTTGCCTACATGAAATCCTGCCGGTATTTAGCCCTAGCCAAGCCTTTGCCGAT
AGCCGCTTCACTATCAATAC

Downstream 100 bases:

>100_bases
TCTGAGCTCTTATCCGCTCTCCAGTGCGAGACTAGTCAGGGTAAGAAAAAGGCTCCCTATAGGGAGCCATGGAGTACTTG
AAGTGAAAAGAGAAATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MARSQAIHLKACSSTMARVCIITTVRDPGVCLESFIRYHLALGIAHIYIFFDDLEDPAIQVALQFSDVTAIPNDEALQVQ
QALGNVLYPKYGPHVGYEVMARQILNVETAIQLALDQGMDWILHIDGDELFYPGQTTAPNWFDRVSDDIFQVTFLNHEAA
PEAFEIEDYFREVTLFKRNPAILDPGFYTQFQKISSKSQYFLAYQNGKSAARIYPSLLPNSVHSFDIPGDHTLVTSSPSI
LHYLNCGFQNYYKKYAQPGNFPDYWWRSKSNPIRVPFHLTSRDAYCSGDRTRMEALYQEFILYNNPEASQSLMENGILTR
ICYPSQLLSSLSTSPV

Sequences:

>Translated_336_residues
MARSQAIHLKACSSTMARVCIITTVRDPGVCLESFIRYHLALGIAHIYIFFDDLEDPAIQVALQFSDVTAIPNDEALQVQ
QALGNVLYPKYGPHVGYEVMARQILNVETAIQLALDQGMDWILHIDGDELFYPGQTTAPNWFDRVSDDIFQVTFLNHEAA
PEAFEIEDYFREVTLFKRNPAILDPGFYTQFQKISSKSQYFLAYQNGKSAARIYPSLLPNSVHSFDIPGDHTLVTSSPSI
LHYLNCGFQNYYKKYAQPGNFPDYWWRSKSNPIRVPFHLTSRDAYCSGDRTRMEALYQEFILYNNPEASQSLMENGILTR
ICYPSQLLSSLSTSPV
>Mature_335_residues
ARSQAIHLKACSSTMARVCIITTVRDPGVCLESFIRYHLALGIAHIYIFFDDLEDPAIQVALQFSDVTAIPNDEALQVQQ
ALGNVLYPKYGPHVGYEVMARQILNVETAIQLALDQGMDWILHIDGDELFYPGQTTAPNWFDRVSDDIFQVTFLNHEAAP
EAFEIEDYFREVTLFKRNPAILDPGFYTQFQKISSKSQYFLAYQNGKSAARIYPSLLPNSVHSFDIPGDHTLVTSSPSIL
HYLNCGFQNYYKKYAQPGNFPDYWWRSKSNPIRVPFHLTSRDAYCSGDRTRMEALYQEFILYNNPEASQSLMENGILTRI
CYPSQLLSSLSTSPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38231; Mature: 38099

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSQAIHLKACSSTMARVCIITTVRDPGVCLESFIRYHLALGIAHIYIFFDDLEDPAIQ
CCCCCEEEEEHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE
VALQFSDVTAIPNDEALQVQQALGNVLYPKYGPHVGYEVMARQILNVETAIQLALDQGMD
EEEEECCEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
WILHIDGDELFYPGQTTAPNWFDRVSDDIFQVTFLNHEAAPEAFEIEDYFREVTLFKRNP
EEEEECCCCEECCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEECCC
AILDPGFYTQFQKISSKSQYFLAYQNGKSAARIYPSLLPNSVHSFDIPGDHTLVTSSPSI
CEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC
LHYLNCGFQNYYKKYAQPGNFPDYWWRSKSNPIRVPFHLTSRDAYCSGDRTRMEALYQEF
HHHHHCCHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
ILYNNPEASQSLMENGILTRICYPSQLLSSLSTSPV
HHCCCCHHHHHHHHCCCEEEEECHHHHHHHHCCCCC
>Mature Secondary Structure 
ARSQAIHLKACSSTMARVCIITTVRDPGVCLESFIRYHLALGIAHIYIFFDDLEDPAIQ
CCCCEEEEEHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE
VALQFSDVTAIPNDEALQVQQALGNVLYPKYGPHVGYEVMARQILNVETAIQLALDQGMD
EEEEECCEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
WILHIDGDELFYPGQTTAPNWFDRVSDDIFQVTFLNHEAAPEAFEIEDYFREVTLFKRNP
EEEEECCCCEECCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEECCC
AILDPGFYTQFQKISSKSQYFLAYQNGKSAARIYPSLLPNSVHSFDIPGDHTLVTSSPSI
CEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC
LHYLNCGFQNYYKKYAQPGNFPDYWWRSKSNPIRVPFHLTSRDAYCSGDRTRMEALYQEF
HHHHHCCHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
ILYNNPEASQSLMENGILTRICYPSQLLSSLSTSPV
HHCCCCHHHHHHHHCCCEEEEECHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA