| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607967
Identifier: 86607967
GI number: 86607967
Start: 482827
End: 483726
Strand: Direct
Name: 86607967
Synonym: CYB_0473
Alternate gene names: NA
Gene position: 482827-483726 (Clockwise)
Preceding gene: 86607966
Following gene: 86607968
Centisome position: 15.85
GC content: 50.44
Gene sequence:
>900_bases TTGGCCGACTCAGCCCTATACTTGGTCAACCATTGCCGCTACGGAGCCATAGCCCAAGCCAACCTAGATTTGATGGGGAT AGATCCCAGTTTTCATCTGCAGAAGGTTTTGCCCAATCTAGGCCAAGGGATCCATCTCCTCACTTGGGATCCCCAGCACA AAGGGTTAACCGAGCAGGATCTCGCTCACATCCAAGCAATTGGCCCTGGATCACTGCTGGCAGCTAACCCGGTATTCCTG ACTTTTACCCAGCCGGATCCCTCAGAACCCAACCGGTTTTACCCCTGTAAATACATCAAGCTGGATAACTTCCTGCCTCA AGAGCTCAACCAAGCCATTCTCCAACATGCCATTACCCACCAAGACAAGTTTATCCCTTCCAAGAGCTACAGCAAGAGCA ACACCGAGGCAGAGTCACTAAAATTTCGCCGCTCCCTGAGGCTGGACTTCGCTTACTTTCAGGAGCATGGATCCCTGCTG CGAGAAAAAATTGCGGCTGTTGCTCCCCAAATCTTCGCCGAGCTAGGCATTGAGAACTTTGACATTCAAATCTTTGAGAT GGAGATGATTGCCAGCCATGATGGCTGCTTCTTTACCGCCCACACCGATAACTCCTACCCACAAACTGCCTTCCGCCAGG TGAGCTGCGTATATTACTTTCACAAAGAGCCAAAGCCTTATCGAGGAGGTGAGCTGCGCATCTACGATACCCAAAGGCAA AAACCTCATCCACCAATCCTGCACGGGGCATACGATGAGGTAACTCCTACAAATAACAGCATCGTCTTCTTCTCCAGCAG TTGCCTACATGAAATCCTGCCGGTATTTAGCCCTAGCCAAGCCTTTGCCGATAGCCGCTTCACTATCAATACTTGGCTAG GAGCCAAGCAATTCACCTAA
Upstream 100 bases:
>100_bases CTCTGGTAGAGCAGGGCAGGCTCAGGGCTACTGAAAGCCCGCTCCGTACCGCTTTAGCGGTCGGAGTCGGGTAGTTTACT CTTTGCTACTGCGGGATTAC
Downstream 100 bases:
>100_bases AGGCTTGCAGCTCCACCATGGCCAGAGTTTGCATAATTACCACTGTTCGGGATCCAGGCGTGTGCTTGGAGTCGTTCATT CGCTATCACCTTGCCCTTGG
Product: 2OG-Fe(II) oxygenase family oxidoreductase
Products: NA
Alternate protein names: ORF60-3 [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQDLAHIQAIGPGSLLAANPVFL TFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITHQDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLL REKIAAVAPQIFAELGIENFDIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT
Sequences:
>Translated_299_residues MADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQDLAHIQAIGPGSLLAANPVFL TFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITHQDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLL REKIAAVAPQIFAELGIENFDIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT >Mature_298_residues ADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQDLAHIQAIGPGSLLAANPVFLT FTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITHQDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLLR EKIAAVAPQIFAELGIENFDIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQK PHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006620 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33967; Mature: 33836
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQD CCCCCEEHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHH LAHIQAIGPGSLLAANPVFLTFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITH HHHEEECCCCCEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH QDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLLREKIAAVAPQIFAELGIENF HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ CEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHEEEEEEEECCCCCCCCCEEEEEECCCC KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT CCCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure ADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQD CCCCEEHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHH LAHIQAIGPGSLLAANPVFLTFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITH HHHEEECCCCCEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH QDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLLREKIAAVAPQIFAELGIENF HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ CEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHEEEEEEEECCCCCCCCCEEEEEECCCC KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT CCCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 1670771 [H]