Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607963

Identifier: 86607963

GI number: 86607963

Start: 476536

End: 478557

Strand: Reverse

Name: 86607963

Synonym: CYB_0469

Alternate gene names: NA

Gene position: 478557-476536 (Counterclockwise)

Preceding gene: 86607964

Following gene: 86607962

Centisome position: 15.71

GC content: 52.08

Gene sequence:

>2022_bases
ATGAATCCTCGAGTTCTACTAGTTTGGACGACTCCACCTGATTATGTCCCACCTCTCACTCTTTCAGAGCGTCAAGTAAC
TCTATGTCCGAAAGGAAAGGTTAGAAGACAGATATTTGATTTTTTTAGTGTTCCAAAAAGCTTAGTTGAGTGTCCTGACA
AAGACTTTGACCTCTATGAATTTGTCCAGTATTCAGATCAAGTCGAAGACAAAGAATTTGACTTGGTGATTGTCTGGACA
TCGAGTGTTGATCTGACTAGTCCTTTCAACACGAAAAAATTTGGCTGCCCAACTGTCTTGCTAGCCGGAGATACGCATCA
TCACGTGCTCCCTATCACCCACCTTCTAACTTACTGGGCCACTGAAGCCTTTGATTATATTGCCACCGCCTATGACCGAC
AGCACCTCCACTGGTTCGCAGCAGCAGGAGTTCAAAGGCTAGCTTGGCTGCCTTTCATTCCCGCTTGTCTCACCAGCTCC
AGTTGGATAGAAAAGAAAGAAATTAGAGTTGCGTTTGTGGGTAACCTTAATTTTAACTCTTATCATTACAGACGTCCTAA
GTTGATCATGTCCTTGAAAAAACTGGGTCTACCTCTACTTATAAAGACTCGAGTCCACAATCCTCAACTAATATTTGGTA
GCTCGTTAATCTCTTTCAACTGCAGCATGAACGGGGATCTGAACTTAAGGAACCTGGAAGTGATTTCTGCAGGGGGCTTT
CTGCTTACTGACCAGCTCTCCTTCGCCTCAGGATTGGACGAACTTTTGGCGCCCGGCACCTACTGCGACACCTACAACTC
CGAAGCCCAACTCCTGGAGAAAATCCGCTACTACCTAGACCATCCCCAGGAGGCCATTCAAATTGCCCGCCGCGCTTATC
ACACTTTCGACCAACACTGGCATCCCCGCCACCGCATTCAGAACCTGCTGGACTGGGTGTTTGGGGGAGAGCTGCCGGAG
CCCTTTCGTTACTCGCCCCGCTCTGATGTGCGCTACTTTGTCAGCACGGCCAGCTCTGCCTGGATAGACACACGACTAGG
AATCTACGAGCCCATTCAAGAGCTGCATCGCGTGCAGGAGCGACTGAGGGTATTTGTTGGCCGAGGCTGTCCTGGGGTGA
TAGCCGCAGACTTGCTGGACCTGCCGCGGCTGGAGCTGTACGTGGAAGAGGGGTTTGGGGATCCCTGTGGTCTGCTGCAG
CAGAAGGGAGTGTCCGAGCGGGTGCATGAGGTGAGGGGGGAGCCGAGCAGTTGGCCTAGCTTTGATGCTGTGGTGTGCAC
AGCTCAGGACTTGCAGCGGCTGGGGCGGCCTGTGAGGGCTAACTTTGCTTTTGTCTTGGCAGAGGACCACCAACTTCTTT
TGGCCAATGCCAGTAAGTTAACGGAAGCAGCAGTGTTGACTGGCTTTGACTTTGGCAAACTCAGGCTTTCGGTAAGGCTC
TACCCAGACACCGTTTTTTACGAGAGGACGTATCTTAACTTTCCTGTGTTTCTGTCTAGTCAGGTGCAGACGGTTATCGA
CATCGGAGCTGGGGTAGGCCTTGGTAGCGTTTGTTTTCGGGGTTTCTGCCCTGAGGCGGCCATTCATTGTTTTGAGGTGG
ATCCCTTGGCCTTGCACCTGCTGCAGCAGAATGCTCTTGGCCTGGGCAACTGCTTTGTGCATCCAGTGGGGCTAGCGGGG
CAGGATAGTTGCAGAACTTGTCGGCTCTGGCCGGAGGATCCTCAGGCCGAGTGGGGAGTGGAGCAGGTGCTCCCTTTCCG
GGAAGCTAGGGCAGCCCTCAAGGAGTTGGGTTTGGAGCCCATCGATGTGCTCAGGGTGGCTACAGGTGGAGAGGAGGTGG
AGGTGTTGACCAGCCTGCAAGAGCAGCTCAAAGACATCAAGGTGATTTACGTGGAGTTTACTTCTGAGCAAGACCGCAAG
CGGATTGACCAGATGCTGGATCCCTCTCATCTCCTCTGGCAGGGGGAGATTTCTCAAGGTAACTACGGCTGTCTCTGTTA
CCTGAGCAGAGCTTACGTTTAG

Upstream 100 bases:

>100_bases
CTCAGGGTAACTACGGGTGCTTATGTTATCTGAATAGATGCATATTCTACGAAAGCAGTGGTAATCTTTAGAAGGCAATC
TTTAGGAAGCTCTGAGACTG

Downstream 100 bases:

>100_bases
GTAAAGTAGCTGAACAAAGTAAAAAAATGAGCCACGGAGCGGAACAAATACGACTCTCTCTCAGATCTAAGCTTCCTCTT
TAGGTCTACTTGCATGTTAT

Product: FkbM family methyltransferase

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Methyltransferase FkbM

Number of amino acids: Translated: 673; Mature: 673

Protein sequence:

>673_residues
MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT
SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSS
SWIEKKEIRVAFVGNLNFNSYHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF
LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHWHPRHRIQNLLDWVFGGELPE
PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQ
QKGVSERVHEVRGEPSSWPSFDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL
YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAG
QDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRK
RIDQMLDPSHLLWQGEISQGNYGCLCYLSRAYV

Sequences:

>Translated_673_residues
MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT
SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSS
SWIEKKEIRVAFVGNLNFNSYHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF
LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHWHPRHRIQNLLDWVFGGELPE
PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQ
QKGVSERVHEVRGEPSSWPSFDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL
YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAG
QDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRK
RIDQMLDPSHLLWQGEISQGNYGCLCYLSRAYV
>Mature_673_residues
MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT
SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSS
SWIEKKEIRVAFVGNLNFNSYHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF
LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHWHPRHRIQNLLDWVFGGELPE
PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQ
QKGVSERVHEVRGEPSSWPSFDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL
YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAG
QDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRK
RIDQMLDPSHLLWQGEISQGNYGCLCYLSRAYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76376; Mature: 76376

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYE
CCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHH
FVQYSDQVEDKEFDLVIVWTSSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWA
HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
TEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSSSWIEKKEIRVAFVGNLNFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCC
YHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF
EECCCHHHHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEECCCCCCCEEEEEEEECCCE
LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHW
EEEECHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
HPRHRIQNLLDWVFGGELPEPFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQE
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
RLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQQKGVSERVHEVRGEPSSWPS
HHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHCCCCCCCCC
FDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL
CCEEEECHHHHHHCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEE
YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHL
CCCEEEEEEEEECCCEEECCHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCHHHHHH
LQQNALGLGNCFVHPVGLAGQDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEP
HHHCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCH
IDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKRIDQMLDPSHLLWQGEISQG
HHHEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCC
NYGCLCYLSRAYV
CCEEEEEEECCCC
>Mature Secondary Structure
MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYE
CCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHH
FVQYSDQVEDKEFDLVIVWTSSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWA
HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
TEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSSSWIEKKEIRVAFVGNLNFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCC
YHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF
EECCCHHHHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEECCCCCCCEEEEEEEECCCE
LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHW
EEEECHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
HPRHRIQNLLDWVFGGELPEPFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQE
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
RLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQQKGVSERVHEVRGEPSSWPS
HHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHCCCCCCCCC
FDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL
CCEEEECHHHHHHCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEE
YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHL
CCCEEEEEEEEECCCEEECCHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCHHHHHH
LQQNALGLGNCFVHPVGLAGQDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEP
HHHCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCH
IDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKRIDQMLDPSHLLWQGEISQG
HHHEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCC
NYGCLCYLSRAYV
CCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA