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The map label for this gene is pdxJ [H]

Identifier: 86607950

GI number: 86607950

Start: 460791

End: 461510

Strand: Direct

Name: pdxJ [H]

Synonym: CYB_0455

Alternate gene names: 86607950

Gene position: 460791-461510 (Clockwise)

Preceding gene: 86607948

Following gene: 86607951

Centisome position: 15.12

GC content: 62.22

Gene sequence:

>720_bases
TTGTTAAGTCTTGGAGTTAACATCGACCACATTGCCACCCTTCGACAGGCACGCCGCACGGTGGAGCCAGATCCGGTAGC
GGCAGCGGTGATTGCCGAGCTGGCGGGGGCAGATGGTATTACAGTGCACTTGCGCGAGGATCGCCGTCACATTCAAGATC
GGGATGTGCGGCTGTTGCGGCAAACCGTGCGCACCCACCTCAACCTGGAGATGGCAGCCACCGAGGAGATGGTGGCGATT
GCCCTGGAGGTCAAGCCCGACTACGTCACTTTGGTTCCCGAGCGGCGGGAGGAGATCACCACCGAAGGTGGGTTGGATGT
GGCGGGGCAGGTGTCGCGCCTCAGGGATGTGGTCGGCCAACTGCAGGGATCCGGCATTCCCGTCAGCTTGTTTATCGACC
CAGATCCGACCCAAATTGCCGCTGCTGCCCAAGTGGGAGCCCGCTGGGTGGAGCTCCACACGGGGCGCTACGCAGAAGCC
TCATCCGCAGCTCAGCGGCAGGTGGAACTTGACCACCTGGAAAAGGCCAGCCAACAGGCCCTTCAGCTGGGCTTGCGGGT
GAATGCGGGACATGGTCTTACCTACTGGAATGTCGGCCCAGTGGCGCGGATCCCTGGCATGGAGGAGCTGAACATCGGCC
ACAGCATTATCAGTCGAGCGGTGCTGGTGGGGCTGGATCGGGCGGTGCGAGAGATGCGTCAGGCGATGGGACTAAGCTGA

Upstream 100 bases:

>100_bases
TCGCGGCCTGAGGCCCATGGCATCCTGGCTCATCTGACCGGCGTAAATTGAATAATGTAATACTAGGGGTATTCTCCTCT
ACACCCAAAGCAGTAAAGCC

Downstream 100 bases:

>100_bases
GGAGCAGGCCCGGCATGAACTCGGAATACTACGGCTACGAAAACTACGTTCTGGATCAGGCGGAGATTGAGCGCCTGTTG
GATCTGCTGCCAGCCAGTAT

Product: pyridoxine 5'-phosphate synthase

Products: NA

Alternate protein names: PNP synthase [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLSLGVNIDHIATLRQARRTVEPDPVAAAVIAELAGADGITVHLREDRRHIQDRDVRLLRQTVRTHLNLEMAATEEMVAI
ALEVKPDYVTLVPERREEITTEGGLDVAGQVSRLRDVVGQLQGSGIPVSLFIDPDPTQIAAAAQVGARWVELHTGRYAEA
SSAAQRQVELDHLEKASQQALQLGLRVNAGHGLTYWNVGPVARIPGMEELNIGHSIISRAVLVGLDRAVREMRQAMGLS

Sequences:

>Translated_239_residues
MLSLGVNIDHIATLRQARRTVEPDPVAAAVIAELAGADGITVHLREDRRHIQDRDVRLLRQTVRTHLNLEMAATEEMVAI
ALEVKPDYVTLVPERREEITTEGGLDVAGQVSRLRDVVGQLQGSGIPVSLFIDPDPTQIAAAAQVGARWVELHTGRYAEA
SSAAQRQVELDHLEKASQQALQLGLRVNAGHGLTYWNVGPVARIPGMEELNIGHSIISRAVLVGLDRAVREMRQAMGLS
>Mature_239_residues
MLSLGVNIDHIATLRQARRTVEPDPVAAAVIAELAGADGITVHLREDRRHIQDRDVRLLRQTVRTHLNLEMAATEEMVAI
ALEVKPDYVTLVPERREEITTEGGLDVAGQVSRLRDVVGQLQGSGIPVSLFIDPDPTQIAAAAQVGARWVELHTGRYAEA
SSAAQRQVELDHLEKASQQALQLGLRVNAGHGLTYWNVGPVARIPGMEELNIGHSIISRAVLVGLDRAVREMRQAMGLS

Specific function: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate [H]

COG id: COG0854

COG function: function code H; Pyridoxal phosphate biosynthesis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788917, Length=235, Percent_Identity=65.1063829787234, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR004569 [H]

Pfam domain/function: PF03740 PdxJ [H]

EC number: =2.6.99.2 [H]

Molecular weight: Translated: 26053; Mature: 26053

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLGVNIDHIATLRQARRTVEPDPVAAAVIAELAGADGITVHLREDRRHIQDRDVRLLR
CEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
QTVRTHLNLEMAATEEMVAIALEVKPDYVTLVPERREEITTEGGLDVAGQVSRLRDVVGQ
HHHHHHCCCHHHHHHCEEEEEEEECCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHH
LQGSGIPVSLFIDPDPTQIAAAAQVGARWVELHTGRYAEASSAAQRQVELDHLEKASQQA
HCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LQLGLRVNAGHGLTYWNVGPVARIPGMEELNIGHSIISRAVLVGLDRAVREMRQAMGLS
HHHCCEEECCCCEEEECCCCHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSLGVNIDHIATLRQARRTVEPDPVAAAVIAELAGADGITVHLREDRRHIQDRDVRLLR
CEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
QTVRTHLNLEMAATEEMVAIALEVKPDYVTLVPERREEITTEGGLDVAGQVSRLRDVVGQ
HHHHHHCCCHHHHHHCEEEEEEEECCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHH
LQGSGIPVSLFIDPDPTQIAAAAQVGARWVELHTGRYAEASSAAQRQVELDHLEKASQQA
HCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LQLGLRVNAGHGLTYWNVGPVARIPGMEELNIGHSIISRAVLVGLDRAVREMRQAMGLS
HHHCCEEECCCCEEEECCCCHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA