| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607951
Identifier: 86607951
GI number: 86607951
Start: 461525
End: 462157
Strand: Direct
Name: 86607951
Synonym: CYB_0456
Alternate gene names: NA
Gene position: 461525-462157 (Clockwise)
Preceding gene: 86607950
Following gene: 86607952
Centisome position: 15.15
GC content: 61.3
Gene sequence:
>633_bases ATGAACTCGGAATACTACGGCTACGAAAACTACGTTCTGGATCAGGCGGAGATTGAGCGCCTGTTGGATCTGCTGCCAGC CAGTATGCGGGAGAGTGTGAAGATCTTGCCCGCCTCGGAACGGCAAACGGTGGTGATCAAAGGCCGTCGGCAAATGCCCT GGGAACGGCAGATGCGGCTGTTCATCAAGCCCTACGAGTGGCGGCAATTTACCCCCCTGCAGCGGGCGGGGCTGTTCCTG CACAAGGTGGGCTACTACAGTCGGGCGGTGTCGCGGCAGATCGACTTTTACCTGGCCATAGCAGCTCTGGGGGGGTTGAG CTTGATCTTCGAGGCCGTACAACAGGATCCCGTGGGAGCAACCGTTTCGGGTGGTTTGAGTGGCTTGGCCCTCTGGCAGT TGCGCCGCGACCAAACCAATGACCGTCGTCTGTTGGCTGCTGACGCCTATGCGGTGGATCGCCTGGTGTTGCGCGGGATC CCGCGGCTGCAGGCGGTGGAGGCCCTAGGGCAGGCGCTGCATGTGGAGGCCCGTCTGGAGGGGCGCTCGGGCAATGATCT GCTGGACATGTTGCGCTACCAAAACCTCAAGCGGCTGGCCCAGCGTCCGGCGGAAGACATTGTGTTGAGCTAA
Upstream 100 bases:
>100_bases TCGGCCACAGCATTATCAGTCGAGCGGTGCTGGTGGGGCTGGATCGGGCGGTGCGAGAGATGCGTCAGGCGATGGGACTA AGCTGAGGAGCAGGCCCGGC
Downstream 100 bases:
>100_bases TCCCGGGTAGAGATGCTTTCTCCCTCGCGGCTGGGATCCCAGGCGGGCCGGTGGGGCCGCCATCTGCTGCAAGTGGCGGT GACCGATTCCACCAATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNSEYYGYENYVLDQAEIERLLDLLPASMRESVKILPASERQTVVIKGRRQMPWERQMRLFIKPYEWRQFTPLQRAGLFL HKVGYYSRAVSRQIDFYLAIAALGGLSLIFEAVQQDPVGATVSGGLSGLALWQLRRDQTNDRRLLAADAYAVDRLVLRGI PRLQAVEALGQALHVEARLEGRSGNDLLDMLRYQNLKRLAQRPAEDIVLS
Sequences:
>Translated_210_residues MNSEYYGYENYVLDQAEIERLLDLLPASMRESVKILPASERQTVVIKGRRQMPWERQMRLFIKPYEWRQFTPLQRAGLFL HKVGYYSRAVSRQIDFYLAIAALGGLSLIFEAVQQDPVGATVSGGLSGLALWQLRRDQTNDRRLLAADAYAVDRLVLRGI PRLQAVEALGQALHVEARLEGRSGNDLLDMLRYQNLKRLAQRPAEDIVLS >Mature_210_residues MNSEYYGYENYVLDQAEIERLLDLLPASMRESVKILPASERQTVVIKGRRQMPWERQMRLFIKPYEWRQFTPLQRAGLFL HKVGYYSRAVSRQIDFYLAIAALGGLSLIFEAVQQDPVGATVSGGLSGLALWQLRRDQTNDRRLLAADAYAVDRLVLRGI PRLQAVEALGQALHVEARLEGRSGNDLLDMLRYQNLKRLAQRPAEDIVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24003; Mature: 24003
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEYYGYENYVLDQAEIERLLDLLPASMRESVKILPASERQTVVIKGRRQMPWERQMRL CCCCCCCCHHEEECHHHHHHHHHHCCHHHHCCEEECCCCCCCEEEEECCCCCCHHHHHHE FIKPYEWRQFTPLQRAGLFLHKVGYYSRAVSRQIDFYLAIAALGGLSLIFEAVQQDPVGA EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TVSGGLSGLALWQLRRDQTNDRRLLAADAYAVDRLVLRGIPRLQAVEALGQALHVEARLE CCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEC GRSGNDLLDMLRYQNLKRLAQRPAEDIVLS CCCCCHHHHHHHHHHHHHHHHCCHHHCCCC >Mature Secondary Structure MNSEYYGYENYVLDQAEIERLLDLLPASMRESVKILPASERQTVVIKGRRQMPWERQMRL CCCCCCCCHHEEECHHHHHHHHHHCCHHHHCCEEECCCCCCCEEEEECCCCCCHHHHHHE FIKPYEWRQFTPLQRAGLFLHKVGYYSRAVSRQIDFYLAIAALGGLSLIFEAVQQDPVGA EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TVSGGLSGLALWQLRRDQTNDRRLLAADAYAVDRLVLRGIPRLQAVEALGQALHVEARLE CCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEC GRSGNDLLDMLRYQNLKRLAQRPAEDIVLS CCCCCHHHHHHHHHHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA